mRNA_P-wetherbeei_contig1053.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1053.2.1
Unique NamemRNA_P-wetherbeei_contig1053.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: A0A3C0TVD6_9PROT (Cytochrome-c oxidase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TVD6_9PROT)

HSP 1 Score: 502 bits (1293), Expect = 2.320e-179
Identity = 229/263 (87.07%), Postives = 248/263 (94.30%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFPDATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWGA 789
            MA+AHAPQHDYHLVDPSPWPIIG+ISAF+TAVGGV+ MHEGP+W+FF+G+AGLAYTF+GWWR+VI EAEHRG HTPVVQLH RYGM LFIASEVMFFVAWFWAFFNASLFPDATNG+WPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHAL +NDR+GLRNGLILT++LG LFS IQAYEY+HA F FAGNIYG+ F+MATGFHGFHVLVGTIFLIVCL RAQAGHFKPD HFGFEAAAWYWHFVDVVWLFLF  IYVWG+
Sbjct:    1 MAEAHAPQHDYHLVDPSPWPIIGSISAFITAVGGVMYMHEGPSWIFFLGSAGLAYTFFGWWRDVINEAEHRGNHTPVVQLHLRYGMLLFIASEVMFFVAWFWAFFNASLFPDATNGVWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALINNDREGLRNGLILTVLLGVLFSCIQAYEYAHATFDFAGNIYGATFFMATGFHGFHVLVGTIFLIVCLFRAQAGHFKPDQHFGFEAAAWYWHFVDVVWLFLFAVIYVWGS 263          
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: A0A353LQ14_9PROT (Cytochrome-c oxidase n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LQ14_9PROT)

HSP 1 Score: 486 bits (1252), Expect = 4.280e-173
Identity = 222/264 (84.09%), Postives = 240/264 (90.91%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFPDAT-NGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWGA 789
            MADAHAPQHDYHLVDPSPWP IG+ISAF+ A+GG++ MH G  WV  IG AG+ YTF GWWR+VI EAEH GQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNAS+FPDA+  G+WPPEGIETLDPWHLPL+NTLILLTSGTTVTWAHHALQH DR GL+ GLILTI LGALFS IQAYEY HA F FAGNIYG+ F+MATGFHGFHV+VGTIFLIVCLLRAQAGHFKP+HHFGFEAAAWYWHFVDVVWLFLFVCIY+WG+
Sbjct:    1 MADAHAPQHDYHLVDPSPWPFIGSISAFIMAIGGIMFMHGGAPWVLLIGTAGVLYTFVGWWRDVIKEAEHDGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASIFPDASIGGVWPPEGIETLDPWHLPLINTLILLTSGTTVTWAHHALQHGDRVGLKRGLILTIALGALFSVIQAYEYMHATFEFAGNIYGATFFMATGFHGFHVIVGTIFLIVCLLRAQAGHFKPNHHFGFEAAAWYWHFVDVVWLFLFVCIYIWGS 264          
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: A0A3A0EQ29_9PROT (Cytochrome-c oxidase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0EQ29_9PROT)

HSP 1 Score: 445 bits (1145), Expect = 9.980e-157
Identity = 199/264 (75.38%), Postives = 230/264 (87.12%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFP-DATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWGA 789
            MADAHA  HDYHLVDPSPWP+IG++SAF+ AVG +++MH+GP+WVF++G AG+ YT Y WWR+V+ E E +G HTPVVQ+  RYGM LFIASEVMFF+AWFWA+FNASLFP +A   IWPP+GIET DPWHLPL+NTLILL SGTTVTWAHHAL HN+RKGL  GL+ T++LGA F+AIQAYEY HAAF+FAGNIYGS F+MATGFHG HV++GTIFL VCLLRA  GHFKPDHHFG EAAAWYWHFVDVVWLFLF CIYVWG+
Sbjct:    1 MADAHARDHDYHLVDPSPWPVIGSLSAFIMAVGAIVAMHDGPSWVFYLGVAGVLYTMYAWWRDVVNEGEFQGFHTPVVQIGLRYGMILFIASEVMFFLAWFWAYFNASLFPNEAMGNIWPPQGIETFDPWHLPLVNTLILLLSGTTVTWAHHALLHNNRKGLVQGLVCTVLLGAAFTAIQAYEYQHAAFSFAGNIYGSTFFMATGFHGAHVIIGTIFLAVCLLRAIKGHFKPDHHFGLEAAAWYWHFVDVVWLFLFACIYVWGS 264          
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: A0A3M1K0Z0_9PROT (Cytochrome-c oxidase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1K0Z0_9PROT)

HSP 1 Score: 444 bits (1141), Expect = 3.510e-156
Identity = 198/263 (75.29%), Postives = 227/263 (86.31%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFP-DATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWG 786
            M+DAH   HDYHLVDPSPWP++G++SAFV AVG +++MH G   + ++GAAG+ YT Y WWR+VI+E EH+G HTPVVQ+  RYGM LFIASEVMFFVAWFWA+FNA+LFP +   G+WPPEGIET DPWHLPL+NTLILL SGTTVTWAHHALQH DR+GL  GL+ T+ LG LF+A+QAYEYSHAAFAFAGNIYG+ F+MATGFHGFHV+VGTIFL VCLLRA  GHFKPDHHFG EAAAWYWHFVDVVWLFLF CIYVWG
Sbjct:    1 MSDAHVKDHDYHLVDPSPWPVVGSLSAFVAAVGAILAMHGGSPAILYVGAAGIIYTMYSWWRDVIIEGEHKGDHTPVVQIGLRYGMILFIASEVMFFVAWFWAYFNAALFPPEQIGGVWPPEGIETFDPWHLPLVNTLILLLSGTTVTWAHHALQHGDRRGLVQGLLCTVALGMLFTAVQAYEYSHAAFAFAGNIYGATFFMATGFHGFHVIVGTIFLTVCLLRAIKGHFKPDHHFGLEAAAWYWHFVDVVWLFLFACIYVWG 263          
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: A0A1Y5S618_9PROT (Cytochrome-c oxidase n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5S618_9PROT)

HSP 1 Score: 435 bits (1118), Expect = 1.390e-152
Identity = 199/264 (75.38%), Postives = 223/264 (84.47%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFP-DATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWGA 789
            MADAH   HDYHLVDPSPWP++G+I+AF+TA+G V+ MH+  +W+  +G  G+ YT + WWR+V+ E E +G HTPVVQL  RYGM LFIASEVMFF AWFWA+FNASLFP +A  G+WPPEGIET DPWHLP LNTLILLTSGTTVTWAHHALQH DRKGL NGLILT+ILGALF+ +QAYEYSHAAF F   IY S FYMATGFHGFHVLVGTIFL+VCL+RA  G FKPDHHFGFEAAAWYWHFVDVVWLFLF CIY WGA
Sbjct:    1 MADAHEVNHDYHLVDPSPWPVVGSITAFMTAIGLVMYMHDMGSWLLIVGTIGILYTMFVWWRDVVREGEFQGFHTPVVQLGLRYGMVLFIASEVMFFAAWFWAYFNASLFPTEAMGGVWPPEGIETFDPWHLPFLNTLILLTSGTTVTWAHHALQHGDRKGLVNGLILTVILGALFTCVQAYEYSHAAFGFTDGIYASTFYMATGFHGFHVLVGTIFLLVCLVRAMKGQFKPDHHFGFEAAAWYWHFVDVVWLFLFCCIYWWGA 264          
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: V4RP33_9HYPH (Cytochrome-c oxidase n=1 Tax=Lutibaculum baratangense AMV1 TaxID=631454 RepID=V4RP33_9HYPH)

HSP 1 Score: 431 bits (1108), Expect = 4.980e-151
Identity = 199/272 (73.16%), Postives = 222/272 (81.62%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFP---------DATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWGA 789
            MADAHA  HDYHLVDPSPWPIIGA++A V   GGV+ MH    W+  +GA  + +T   WWR+V+ EAEH G HTPVVQLHHRYGM LFIASEVMFFVAWFWA+F+ASLFP         +A  G+WPPEGIET DPWHLPL+NTLILLTSGTTVTWAHHAL HNDR GL+ GLILTI LG +F+++QAYEYSHAAF F GNIYG+ FYMATGFHG HV++GTIFLIVCL+RA  GHF P HHFGFEAAAWYWHFVDVVWLFLF  IYVWGA
Sbjct:    1 MADAHAKHHDYHLVDPSPWPIIGALAALVITTGGVLFMHGMGPWLLILGALMVVFTMISWWRDVVREAEHGGYHTPVVQLHHRYGMILFIASEVMFFVAWFWAYFDASLFPHEAIQYSRVEALGGVWPPEGIETFDPWHLPLINTLILLTSGTTVTWAHHALLHNDRNGLKWGLILTIALGLIFTSVQAYEYSHAAFDFGGNIYGATFYMATGFHGAHVIIGTIFLIVCLIRALKGHFTPTHHFGFEAAAWYWHFVDVVWLFLFASIYVWGA 272          
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: X5MMH2_9HYPH (Cytochrome-c oxidase n=2 Tax=Parvibaculaceae TaxID=2813035 RepID=X5MMH2_9HYPH)

HSP 1 Score: 430 bits (1105), Expect = 2.190e-150
Identity = 200/278 (71.94%), Postives = 226/278 (81.29%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPA------WVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFP---------DATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWGA 789
            MADAHA +HDYHLVDPSPWP +G+I AF+  VGGV+ M   P       WVF+IG A + YT  GWWR+V  EAEH+G HTPVVQLHHRYGM LFIASEVMFFVAWFWA+F+ASLF          +AT G+WPP GIET DP+HLPL+NTL+LLTSGTTVTWAHHALQ+ DR+GL+ GLI T++LG LFSA+QAYEYSHAAF F+GNIYG+ FYMATGFHGFHV++GTIFL VCL RA AGHF   HHFGFEAAAWYWHFVDVVWLFLF  IYVWGA
Sbjct:    1 MADAHAKEHDYHLVDPSPWPFVGSIGAFIMMVGGVVYMKPDPVLGMSGPWVFYIGLAMVLYTMVGWWRDVTKEAEHQGHHTPVVQLHHRYGMVLFIASEVMFFVAWFWAYFDASLFTGEVAQYARVEATGGVWPPVGIETFDPFHLPLMNTLVLLTSGTTVTWAHHALQNGDREGLKWGLICTVVLGVLFSALQAYEYSHAAFGFSGNIYGATFYMATGFHGFHVIIGTIFLAVCLFRAYAGHFTAKHHFGFEAAAWYWHFVDVVWLFLFAAIYVWGA 278          
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: A0A081BAF0_9HYPH (Cytochrome-c oxidase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BAF0_9HYPH)

HSP 1 Score: 429 bits (1102), Expect = 4.890e-150
Identity = 198/272 (72.79%), Postives = 225/272 (82.72%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFP---------DATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWGA 789
            MADAHA  HDYHLV+PSPWP +G+++AFV AVG ++ MH G  WV FIG AG+ YT  GWWR+V+ EAE  G HTPVVQLH RYGM +FIASEVMFFVAWFWAFF+ASLF          +AT G WPP GIET DPWHLPL+NTLILLTSGTTVTWAHHALQH DRKGL+ GL+LT++LG LF+A+QAYEYSHAAF F+G+IYG+ F+MATGFHGFHV++GT+FL VCL RA AGHF P HHFGFEAAAWYWHFVDVVWLFLF  IYVW A
Sbjct:    1 MADAHAKHHDYHLVNPSPWPFVGSLAAFVLAVGAIMYMHGGAPWVMFIGFAGVIYTMIGWWRDVVKEAE-GGDHTPVVQLHLRYGMIMFIASEVMFFVAWFWAFFDASLFSNEAAQFARVEATGGQWPPVGIETFDPWHLPLINTLILLTSGTTVTWAHHALQHGDRKGLKMGLVLTVVLGMLFTALQAYEYSHAAFGFSGSIYGATFFMATGFHGFHVIIGTVFLAVCLGRAMAGHFTPQHHFGFEAAAWYWHFVDVVWLFLFASIYVWAA 271          
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: A0A2A5EM94_9HYPH (Cytochrome-c oxidase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EM94_9HYPH)

HSP 1 Score: 428 bits (1100), Expect = 9.850e-150
Identity = 198/272 (72.79%), Postives = 221/272 (81.25%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFPD---------ATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWGA 789
            MADAHAPQHDYHLV+PS WPIIG+I+A VTA+G V  MH G  W   IG  G+AYT  GWWR+VI+EA+  G HTPVVQLH RYGM +FIASEVMFFVAWFWA+F+ S FP           T G+WPP GIET DPWHLP +NTLILLTSGTT TWAHHALQH DRKGL+ GL+LT+ILGALF+A+QAYEYSHAAF F+GNIYG+ F+MATGFHGFHV++GTIFL VCL RA  GHF   HHFGFEAAAWYWHFVDVVWLFLF  IYVWGA
Sbjct:    1 MADAHAPQHDYHLVNPSAWPIIGSIAALVTAIGAVFYMHGGAPWAMIIGFVGIAYTMAGWWRDVIIEAQ-GGDHTPVVQLHLRYGMIMFIASEVMFFVAWFWAYFDVSFFPGNDIMFARTAVTGGVWPPVGIETFDPWHLPFINTLILLTSGTTATWAHHALQHGDRKGLKQGLVLTVILGALFTALQAYEYSHAAFGFSGNIYGATFFMATGFHGFHVIIGTIFLAVCLGRAMKGHFTEKHHFGFEAAAWYWHFVDVVWLFLFASIYVWGA 271          
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Match: UPI00187BA8FD (cytochrome c oxidase subunit 3 n=2 Tax=Sneathiella TaxID=510690 RepID=UPI00187BA8FD)

HSP 1 Score: 423 bits (1088), Expect = 4.310e-148
Identity = 194/265 (73.21%), Postives = 220/265 (83.02%), Query Frame = 1
Query:    1 MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGAAGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAWFWAFFNASLFP-DATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAHHALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFYMATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVVWLFLFVCIYVWGAT 792
            MAD+HA QHDYHLVDPSPWP + ++SAF+TA+G V+ MHE    VF IG   L YT Y WWR+V+ E EH+G HTPVVQL  RYGM +FIASEVMFFVAWFWA+FNA+ FP +A   +WPPEGI+T DPWHLPL+NTLILLTSGTTVTWAHHALQH DRKGL  GL LT++LGA+F+ +QAYEYSHAAFAF   IY S FYMATGFHG HVL+GTIFL+VCL+RA  GHFK DHHFGFEAAAWYWHFVDVVWLFLFV IY WG+ 
Sbjct:    1 MADSHAKQHDYHLVDPSPWPALASLSAFITAIGAVMWMHEKGVAVFVIGMLMLLYTAYVWWRDVVKEGEHQGHHTPVVQLGLRYGMIMFIASEVMFFVAWFWAYFNAAFFPTEAIGAVWPPEGIQTFDPWHLPLINTLILLTSGTTVTWAHHALQHGDRKGLIQGLTLTVVLGAIFTCVQAYEYSHAAFAFQDGIYASTFYMATGFHGAHVLIGTIFLLVCLIRAARGHFKSDHHFGFEAAAWYWHFVDVVWLFLFVAIYWWGSA 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1053.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TVD6_9PROT2.320e-17987.07Cytochrome-c oxidase n=1 Tax=Alphaproteobacteria b... [more]
A0A353LQ14_9PROT4.280e-17384.09Cytochrome-c oxidase n=4 Tax=Alphaproteobacteria b... [more]
A0A3A0EQ29_9PROT9.980e-15775.38Cytochrome-c oxidase n=1 Tax=Proteobacteria bacter... [more]
A0A3M1K0Z0_9PROT3.510e-15675.29Cytochrome-c oxidase n=1 Tax=Alphaproteobacteria b... [more]
A0A1Y5S618_9PROT1.390e-15275.38Cytochrome-c oxidase n=1 Tax=Oceanibacterium hippo... [more]
V4RP33_9HYPH4.980e-15173.16Cytochrome-c oxidase n=1 Tax=Lutibaculum baratange... [more]
X5MMH2_9HYPH2.190e-15071.94Cytochrome-c oxidase n=2 Tax=Parvibaculaceae TaxID... [more]
A0A081BAF0_9HYPH4.890e-15072.79Cytochrome-c oxidase n=1 Tax=Tepidicaulis marinus ... [more]
A0A2A5EM94_9HYPH9.850e-15072.79Cytochrome-c oxidase n=1 Tax=Rhodobiaceae bacteriu... [more]
UPI00187BA8FD4.310e-14873.21cytochrome c oxidase subunit 3 n=2 Tax=Sneathiella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1053contigP-wetherbeei_contig1053:584..1378 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog631454.N177_2258
Preferred namectaE
PFAMsCOX3
Model size795
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00016
KEGG koko:K02276
KEGG TC3.D.4.4,3.D.4.6
KEGG ReactionR00081
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00155
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
Exons1
Evalue8.17e-152
EggNOG OGsCOG1845@1|root,COG1845@2|Bacteria,1MUCK@1224|Proteobacteria,2TQWA@28211|Alphaproteobacteria,1JNDJ@119043|Rhodobiaceae
EC1.9.3.1
DescriptionCytochrome c oxidase subunit III
Cds size795
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185873.9157836-CDS-P-wetherbeei_contig1053:583..13781683185873.9157836-CDS-P-wetherbeei_contig1053:583..1378Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1053 584..1378 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1053.2.1prot_P-wetherbeei_contig1053.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1053 584..1378 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1053.2.1

>prot_P-wetherbeei_contig1053.2.1 ID=prot_P-wetherbeei_contig1053.2.1|Name=mRNA_P-wetherbeei_contig1053.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=265bp
MADAHAPQHDYHLVDPSPWPIIGAISAFVTAVGGVISMHEGPAWVFFIGA
AGLAYTFYGWWREVILEAEHRGQHTPVVQLHHRYGMFLFIASEVMFFVAW
FWAFFNASLFPDATNGIWPPEGIETLDPWHLPLLNTLILLTSGTTVTWAH
HALQHNDRKGLRNGLILTIILGALFSAIQAYEYSHAAFAFAGNIYGSVFY
MATGFHGFHVLVGTIFLIVCLLRAQAGHFKPDHHFGFEAAAWYWHFVDVV
WLFLFVCIYVWGAT*
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mRNA from alignment at P-wetherbeei_contig1053:584..1378+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1053.2.1 ID=mRNA_P-wetherbeei_contig1053.2.1|Name=mRNA_P-wetherbeei_contig1053.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig1053:584..1378+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGACGCACACGCTCCCCAACATGATTATCATCTGGTCGATCCCAG CCCGTGGCCGATTATCGGCGCCATCAGCGCCTTTGTGACGGCGGTTGGCG GCGTAATCAGCATGCATGAAGGACCTGCCTGGGTATTTTTTATCGGGGCG GCCGGGCTGGCTTACACATTTTATGGCTGGTGGCGCGAAGTCATCCTGGA AGCCGAGCATCGGGGCCAGCATACCCCGGTTGTGCAACTGCACCACCGCT ATGGCATGTTTCTGTTCATCGCCTCCGAGGTCATGTTCTTCGTCGCCTGG TTCTGGGCCTTTTTCAATGCCAGCCTTTTCCCGGACGCGACAAACGGCAT TTGGCCACCCGAAGGCATTGAAACCCTCGACCCCTGGCATTTGCCGCTGC TGAATACCCTCATCCTGCTGACCTCTGGCACCACGGTTACCTGGGCGCAC CATGCCCTGCAACATAATGACCGCAAGGGGCTGCGTAATGGTCTGATCCT GACCATTATCCTGGGGGCGCTGTTTAGCGCCATTCAGGCTTATGAATATT CGCATGCGGCCTTTGCGTTCGCTGGCAATATTTATGGTTCGGTCTTCTAT ATGGCGACCGGGTTCCATGGCTTTCATGTGCTGGTCGGCACGATTTTTCT GATCGTCTGCCTGTTGCGGGCACAGGCCGGCCACTTTAAGCCGGATCACC ATTTCGGCTTTGAAGCTGCCGCCTGGTATTGGCACTTTGTTGACGTTGTA TGGCTGTTCCTGTTTGTCTGCATCTATGTATGGGGCGCCACTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1053:584..1378+

>mRNA_P-wetherbeei_contig1053.2.1 ID=mRNA_P-wetherbeei_contig1053.2.1|Name=mRNA_P-wetherbeei_contig1053.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig1053:584..1378+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGACGCACACGCTCCCCAACATGATTATCATCTGGTCGATCCCAG
CCCGTGGCCGATTATCGGCGCCATCAGCGCCTTTGTGACGGCGGTTGGCG
GCGTAATCAGCATGCATGAAGGACCTGCCTGGGTATTTTTTATCGGGGCG
GCCGGGCTGGCTTACACATTTTATGGCTGGTGGCGCGAAGTCATCCTGGA
AGCCGAGCATCGGGGCCAGCATACCCCGGTTGTGCAACTGCACCACCGCT
ATGGCATGTTTCTGTTCATCGCCTCCGAGGTCATGTTCTTCGTCGCCTGG
TTCTGGGCCTTTTTCAATGCCAGCCTTTTCCCGGACGCGACAAACGGCAT
TTGGCCACCCGAAGGCATTGAAACCCTCGACCCCTGGCATTTGCCGCTGC
TGAATACCCTCATCCTGCTGACCTCTGGCACCACGGTTACCTGGGCGCAC
CATGCCCTGCAACATAATGACCGCAAGGGGCTGCGTAATGGTCTGATCCT
GACCATTATCCTGGGGGCGCTGTTTAGCGCCATTCAGGCTTATGAATATT
CGCATGCGGCCTTTGCGTTCGCTGGCAATATTTATGGTTCGGTCTTCTAT
ATGGCGACCGGGTTCCATGGCTTTCATGTGCTGGTCGGCACGATTTTTCT
GATCGTCTGCCTGTTGCGGGCACAGGCCGGCCACTTTAAGCCGGATCACC
ATTTCGGCTTTGAAGCTGCCGCCTGGTATTGGCACTTTGTTGACGTTGTA
TGGCTGTTCCTGTTTGTCTGCATCTATGTATGGGGCGCCACTTAA
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