mRNA_P-wetherbeei_contig10523.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: D7FQA3_ECTSI (Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA3_ECTSI) HSP 1 Score: 237 bits (604), Expect = 1.060e-73 Identity = 121/224 (54.02%), Postives = 163/224 (72.77%), Query Frame = 1 Query: 55 RARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILR-GAKTKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723 R + ++N LPLGF + L+I L WP PG V+ +V Y++VQT NV++IFIISGLTLKT D+K+A ++GR G+ +G++ IL +T +GFV EIPF + EF+YGL+VFCVVPTTL+SGV LV GGNDALALLLTV TN+ GV+TVPF +KG++ G +D V LL+KL+++VL+PLV GK + + VPG + V R K+ LSLTSS L + VW +S Sbjct: 11 RVQKFCIKNVLPLGFFVVLVIALAWPAPGKAVAKPKVGDYRLVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGEDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKARVKRFKVRLSLTSSAMLIMVVWQTLS 234
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A6H5KQQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ7_9PHAE) HSP 1 Score: 228 bits (580), Expect = 6.950e-71 Identity = 124/259 (47.88%), Postives = 166/259 (64.09%), Query Frame = 1 Query: 55 RARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVS-----------------------------------QGGGNDALALLLTVVTNMTGVITVPFLLKGILR-GAKTKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723 R + ++N LPLGF +AL+I L WP PG V+ +V Y++VQT NV++IFIISGLTLKT D+K+A ++GR G+ +G++ IL +T +GFV EIPF + EF+YGL+VFCVVPTTL+SGV LV Q GGNDALALLLTV TN+ GV+TVPF +KG++ G +D V LL+KL+++VL+PLV GK + + VPG + WV R K+ LSLTSS L + VW +S Sbjct: 11 RVQKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNHHLLRSVEWFSLHGVSRCFVAFFTSCAPPFTLSPQAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLS 269
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A836CJ89_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ89_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.030e-65 Identity = 113/207 (54.59%), Postives = 148/207 (71.50%), Query Frame = 1 Query: 103 LALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAKTKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723 +AL+IGL WP PG +VSSW VA Y+VVQT NV+ +F+ISGL LK++D++ A R+G GF G++ IL +TPL GFV V +PFA +EFAYGLA+FC VPTT+A GVA+ + GGN ALAL+LTV +N+ GV+ PF L+ G +DA+ LL+ LL+TVL PL+ G+A+ VP RT V RHK AL L SS +L + VW VS Sbjct: 1 MALLIGLAWPQPGTEVSSWMVADYRVVQTLNVMTVFLISGLNLKSADIRAAVSREGSLGFIVGMVLILGVTPLSGFVAVRLPFAEKEFAYGLAIFCGVPTTIAVGVAMTTAAGGNAALALMLTVFSNLLGVLITPFWLQAFFSGQDVAIDALDLLVNLLITVLAPLLVGQAIRFLVPPVRTLVTRHKTALKLISSTSLALIVWQTVS 207
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A836CLX8_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX8_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.960e-59 Identity = 111/217 (51.15%), Postives = 146/217 (67.28%), Query Frame = 1 Query: 91 LGFGLALIIGLVWPWPGAQVSSWEVAGYK-VVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAK-----TKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723 +G A+IIGL WPW G +V + + Y T V+ IFIISGLTLKT D++ A + GR G +GII IL +TP+LGF+ + +P A EFAYGL VFC VPTTLASGV++V+Q GGN ALALLLTVVTN+T V+T PF L + + +D V+LL KL+VTVL+PLV GK + D VPGC+ +V R K+ L + ++I L + VW +S Sbjct: 1 MGLATAVIIGLSWPWLGQKVGAPDAGEYGGAASTACVIGIFIISGLTLKTDDIRMAISKQGRAGTIYGIIAILGITPILGFLTIRLPLAQPEFAYGLTVFCAVPTTLASGVSMVTQAGGNGALALLLTVVTNLTAVVTTPFWLSAMFKSKSQGTNGATIDPVSLLQKLIVTVLVPLVFGKLLRDLVPGCKGFVTRQKVKLGVCNNIMLTLIVWLTIS 217
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A1Y1IAA6_KLENI (Sodium Bile acid symporter family n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAA6_KLENI) HSP 1 Score: 200 bits (509), Expect = 6.170e-59 Identity = 110/222 (49.55%), Postives = 149/222 (67.12%), Query Frame = 1 Query: 61 RACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAKT-KVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723 R ++ NFLPLGF AL L WP PG +V+SW++ +V+Q N +++F+ISGLTLK++D+K+A G +GI+TIL +TP +GFV +IPF +EF GL +FC VPTTL GVALV+ GN ALAL LTV TN+ G++TVP++LK LRG+ T +DA+ L KL TVL+P + GK T RT+V HK+ALSL S+ NL + VW +S Sbjct: 72 RRFVIANFLPLGFLFALAFALSWPQPGREVASWKIGSIRVIQALNNILVFLISGLTLKSNDLKEAL--KNWVGVLYGIVTILLVTPCVGFVTQQIPFRPREFTEGLTIFCAVPTTLGVGVALVAASKGNQALALFLTVSTNVLGILTVPYVLKLTLRGSSTISIDALDLFFKLTCTVLVPTLVGKFASSTSSRVRTFVQSHKVALSLFSTSNLVLIVWQTLS 291
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: C1E9H5_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC) HSP 1 Score: 191 bits (486), Expect = 1.580e-55 Identity = 107/251 (42.63%), Postives = 158/251 (62.95%), Query Frame = 1 Query: 1 VSQANASSRRCCGSCTWPRARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAK------TKVD----AVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723 ++ A+ R CG W R + +++N+L LGF +++ L WP PG ++ S + + + QTC +V+IF ISGLTLKT+D+KKA G+ A+GIITIL +TP++GFV+V+IPF EF YGLA+F VPTTL SGV LV+ GN +AL+LTV TN+ GV TVPF+L +L A T D A LL+KL++++++P+ GKA + V ++ ++K L LT++ L VW ++S Sbjct: 1 MTAADVQPRETCGD-HWKRWKPWLIKNYLVLGFVFVIVLALSWPLPGRELGSPKSGDFPIAQTCCIVVIFFISGLTLKTADIKKALGQPA--ALAYGIITILLVTPMMGFVVVQIPFEPVEFRYGLALFACVPTTLTSGVTLVTSALGNGVMALMLTVTTNVLGVFTVPFILNAVLLSAPGGDSGGTDTDMAETAAKLLLKLIISIIIPMGVGKATREFVEQAPSFTTKYKTELGLTNNSCLIAIVWMSIS 248
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A7S0Z714_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z714_9CHLO) HSP 1 Score: 188 bits (477), Expect = 1.820e-54 Identity = 108/234 (46.15%), Postives = 147/234 (62.82%), Query Frame = 1 Query: 55 RARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAKTKV-----------DAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723 RA+ ++ NFL LGF LAL IGL P G ++ W G+ +VQT V+IIFIISG TLKT ++ +A + GR A+G+++IL +TPLLGF+ + IP+ +F YGLA+FC VPTTL SGV LV GN ALAL+LTV TN+ GV TVPF I R + + AV LL+KLL T+L+P+ AGK + +P A+HK L+LT++ L + VW ++S Sbjct: 24 RAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSCLIIVVWMSIS 256
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A061RZ11_9CHLO (Cysteine proteinase cathepsin f n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZ11_9CHLO) HSP 1 Score: 186 bits (473), Expect = 3.210e-53 Identity = 114/241 (47.30%), Postives = 150/241 (62.24%), Query Frame = 1 Query: 25 RRCCG-SCTWPRARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILR----GAKTKV---DAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723 +RCC + RA ++++FLPLGF +AL +GL +P PGA ++ +E GYK+ Q+ +V+IFI+SGLTLKTS+V A + +GII ILFLTP G I++IPF F G AVFC VPTTL SGV LV+Q GN ALAL+LTV TN+ GV T P +L LR A+T D AL++KL+ T+L P V GK V ++ WVA HK LSLT++ L VW +S Sbjct: 49 KRCCKLELSLASLRAFVIKHFLPLGFCVALAVGLGFPLPGAWLAGFEFGGYKLAQSVCIVLIFIVSGLTLKTSEVTAAI--KAWLAYTYGIIAILFLTPFAGLAILQIPFEEPAFGVGFAVFCSVPTTLTSGVTLVNQAAGNGALALMLTVTTNVLGVFTTPLMLALNLRVSGMSAETGTITFDTGALIVKLVATILAPTVFGKLVRESHHSVSDWVAGHKTLLSLTNNSLLICIVWMTIS 287
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A7S2QY47_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S2QY47_9CHLO) HSP 1 Score: 180 bits (457), Expect = 6.600e-53 Identity = 105/225 (46.67%), Postives = 142/225 (63.11%), Query Frame = 1 Query: 55 RARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAKTKV-----------DAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINL 696 RA+ ++ NFL LGF LAL IGL P G ++ W G+ +VQT V+IIFIISG TLKT ++ +A + GR A+G+++IL +TPLLGF+ + IP+ +F YGLA+FC VPTTL SGV LV GN ALAL+LTV TN+ GV TVPF I R + + AV LL+KLL T+L+P+ AGK + +P A+HK L+LT++ +L Sbjct: 29 RAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSSL 252
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A7S0SJ85_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO) HSP 1 Score: 184 bits (466), Expect = 1.420e-52 Identity = 105/236 (44.49%), Postives = 145/236 (61.44%), Query Frame = 1 Query: 49 WPRARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGA-----------KTKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723 W R + +LRNFL LGF + +GL WP PGA++ + + QTC +V IF ISGLTLKT+D+K A G +GII IL +TP+LGF++V+IPF +F YGLA+FC VPTTL SGV LV+ GN ALAL+LTV TN+ GV TVPF+L +L A A+ LLIKL++++++P+ GK+V + + A +K+ L L ++ L VW +VS Sbjct: 2 WRRWKPWLLRNFLVLGFAAVITLGLSWPLPGAELGDPMAGDFPIAQTCCIVTIFFISGLTLKTADIKNALNEHV--GLVYGIIMILGVTPMLGFLVVQIPFEPIQFRYGLALFCCVPTTLTSGVTLVTSALGNSALALMLTVTTNVLGVFTVPFILNAVLDSAPGNGXXXXXXXSVAKTAMQLLIKLVISIIIPMSIGKSVREFFAVAQKATATYKVELGLVNNSCLIAIVWMSVS 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10523.1.1 >prot_P-wetherbeei_contig10523.1.1 ID=prot_P-wetherbeei_contig10523.1.1|Name=mRNA_P-wetherbeei_contig10523.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=241bp VSQANASSRRCCGSCTWPRARACILRNFLPLGFGLALIIGLVWPWPGAQVback to top mRNA from alignment at P-wetherbeei_contig10523:334..2301+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10523.1.1 ID=mRNA_P-wetherbeei_contig10523.1.1|Name=mRNA_P-wetherbeei_contig10523.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1968bp|location=Sequence derived from alignment at P-wetherbeei_contig10523:334..2301+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10523:334..2301+ >mRNA_P-wetherbeei_contig10523.1.1 ID=mRNA_P-wetherbeei_contig10523.1.1|Name=mRNA_P-wetherbeei_contig10523.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig10523:334..2301+ (Phaeothamnion wetherbeei SAG_119_79)back to top |