mRNA_P-wetherbeei_contig10523.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10523.1.1
Unique NamemRNA_P-wetherbeei_contig10523.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: D7FQA3_ECTSI (Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA3_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 1.060e-73
Identity = 121/224 (54.02%), Postives = 163/224 (72.77%), Query Frame = 1
Query:   55 RARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILR-GAKTKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723
            R +   ++N LPLGF + L+I L WP PG  V+  +V  Y++VQT NV++IFIISGLTLKT D+K+A  ++GR G+ +G++ IL +T  +GFV  EIPF + EF+YGL+VFCVVPTTL+SGV LV   GGNDALALLLTV TN+ GV+TVPF +KG++  G    +D V LL+KL+++VL+PLV GK + + VPG +  V R K+ LSLTSS  L + VW  +S
Sbjct:   11 RVQKFCIKNVLPLGFFVVLVIALAWPAPGKAVAKPKVGDYRLVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGEDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKARVKRFKVRLSLTSSAMLIMVVWQTLS 234          
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A6H5KQQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ7_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 6.950e-71
Identity = 124/259 (47.88%), Postives = 166/259 (64.09%), Query Frame = 1
Query:   55 RARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVS-----------------------------------QGGGNDALALLLTVVTNMTGVITVPFLLKGILR-GAKTKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723
            R +   ++N LPLGF +AL+I L WP PG  V+  +V  Y++VQT NV++IFIISGLTLKT D+K+A  ++GR G+ +G++ IL +T  +GFV  EIPF + EF+YGL+VFCVVPTTL+SGV LV                                    Q GGNDALALLLTV TN+ GV+TVPF +KG++  G    +D V LL+KL+++VL+PLV GK + + VPG + WV R K+ LSLTSS  L + VW  +S
Sbjct:   11 RVQKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNHHLLRSVEWFSLHGVSRCFVAFFTSCAPPFTLSPQAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLS 269          
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A836CJ89_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ89_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.030e-65
Identity = 113/207 (54.59%), Postives = 148/207 (71.50%), Query Frame = 1
Query:  103 LALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAKTKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723
            +AL+IGL WP PG +VSSW VA Y+VVQT NV+ +F+ISGL LK++D++ A  R+G  GF  G++ IL +TPL GFV V +PFA +EFAYGLA+FC VPTT+A GVA+ +  GGN ALAL+LTV +N+ GV+  PF L+    G    +DA+ LL+ LL+TVL PL+ G+A+   VP  RT V RHK AL L SS +L + VW  VS
Sbjct:    1 MALLIGLAWPQPGTEVSSWMVADYRVVQTLNVMTVFLISGLNLKSADIRAAVSREGSLGFIVGMVLILGVTPLSGFVAVRLPFAEKEFAYGLAIFCGVPTTIAVGVAMTTAAGGNAALALMLTVFSNLLGVLITPFWLQAFFSGQDVAIDALDLLVNLLITVLAPLLVGQAIRFLVPPVRTLVTRHKTALKLISSTSLALIVWQTVS 207          
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A836CLX8_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX8_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.960e-59
Identity = 111/217 (51.15%), Postives = 146/217 (67.28%), Query Frame = 1
Query:   91 LGFGLALIIGLVWPWPGAQVSSWEVAGYK-VVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAK-----TKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723
            +G   A+IIGL WPW G +V + +   Y     T  V+ IFIISGLTLKT D++ A  + GR G  +GII IL +TP+LGF+ + +P A  EFAYGL VFC VPTTLASGV++V+Q GGN ALALLLTVVTN+T V+T PF L  + +          +D V+LL KL+VTVL+PLV GK + D VPGC+ +V R K+ L + ++I L + VW  +S
Sbjct:    1 MGLATAVIIGLSWPWLGQKVGAPDAGEYGGAASTACVIGIFIISGLTLKTDDIRMAISKQGRAGTIYGIIAILGITPILGFLTIRLPLAQPEFAYGLTVFCAVPTTLASGVSMVTQAGGNGALALLLTVVTNLTAVVTTPFWLSAMFKSKSQGTNGATIDPVSLLQKLIVTVLVPLVFGKLLRDLVPGCKGFVTRQKVKLGVCNNIMLTLIVWLTIS 217          
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A1Y1IAA6_KLENI (Sodium Bile acid symporter family n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAA6_KLENI)

HSP 1 Score: 200 bits (509), Expect = 6.170e-59
Identity = 110/222 (49.55%), Postives = 149/222 (67.12%), Query Frame = 1
Query:   61 RACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAKT-KVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723
            R  ++ NFLPLGF  AL   L WP PG +V+SW++   +V+Q  N +++F+ISGLTLK++D+K+A       G  +GI+TIL +TP +GFV  +IPF  +EF  GL +FC VPTTL  GVALV+   GN ALAL LTV TN+ G++TVP++LK  LRG+ T  +DA+ L  KL  TVL+P + GK    T    RT+V  HK+ALSL S+ NL + VW  +S
Sbjct:   72 RRFVIANFLPLGFLFALAFALSWPQPGREVASWKIGSIRVIQALNNILVFLISGLTLKSNDLKEAL--KNWVGVLYGIVTILLVTPCVGFVTQQIPFRPREFTEGLTIFCAVPTTLGVGVALVAASKGNQALALFLTVSTNVLGILTVPYVLKLTLRGSSTISIDALDLFFKLTCTVLVPTLVGKFASSTSSRVRTFVQSHKVALSLFSTSNLVLIVWQTLS 291          
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: C1E9H5_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC)

HSP 1 Score: 191 bits (486), Expect = 1.580e-55
Identity = 107/251 (42.63%), Postives = 158/251 (62.95%), Query Frame = 1
Query:    1 VSQANASSRRCCGSCTWPRARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAK------TKVD----AVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723
            ++ A+   R  CG   W R +  +++N+L LGF   +++ L WP PG ++ S +   + + QTC +V+IF ISGLTLKT+D+KKA G+      A+GIITIL +TP++GFV+V+IPF   EF YGLA+F  VPTTL SGV LV+   GN  +AL+LTV TN+ GV TVPF+L  +L  A       T  D    A  LL+KL++++++P+  GKA  + V    ++  ++K  L LT++  L   VW ++S
Sbjct:    1 MTAADVQPRETCGD-HWKRWKPWLIKNYLVLGFVFVIVLALSWPLPGRELGSPKSGDFPIAQTCCIVVIFFISGLTLKTADIKKALGQPA--ALAYGIITILLVTPMMGFVVVQIPFEPVEFRYGLALFACVPTTLTSGVTLVTSALGNGVMALMLTVTTNVLGVFTVPFILNAVLLSAPGGDSGGTDTDMAETAAKLLLKLIISIIIPMGVGKATREFVEQAPSFTTKYKTELGLTNNSCLIAIVWMSIS 248          
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A7S0Z714_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z714_9CHLO)

HSP 1 Score: 188 bits (477), Expect = 1.820e-54
Identity = 108/234 (46.15%), Postives = 147/234 (62.82%), Query Frame = 1
Query:   55 RARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAKTKV-----------DAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723
            RA+  ++ NFL LGF LAL IGL  P  G  ++ W   G+ +VQT  V+IIFIISG TLKT ++ +A  + GR   A+G+++IL +TPLLGF+ + IP+   +F YGLA+FC VPTTL SGV LV    GN ALAL+LTV TN+ GV TVPF    I R   + +            AV LL+KLL T+L+P+ AGK   + +P      A+HK  L+LT++  L + VW ++S
Sbjct:   24 RAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSCLIIVVWMSIS 256          
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A061RZ11_9CHLO (Cysteine proteinase cathepsin f n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZ11_9CHLO)

HSP 1 Score: 186 bits (473), Expect = 3.210e-53
Identity = 114/241 (47.30%), Postives = 150/241 (62.24%), Query Frame = 1
Query:   25 RRCCG-SCTWPRARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILR----GAKTKV---DAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723
            +RCC    +    RA ++++FLPLGF +AL +GL +P PGA ++ +E  GYK+ Q+  +V+IFI+SGLTLKTS+V  A        + +GII ILFLTP  G  I++IPF    F  G AVFC VPTTL SGV LV+Q  GN ALAL+LTV TN+ GV T P +L   LR     A+T     D  AL++KL+ T+L P V GK V ++      WVA HK  LSLT++  L   VW  +S
Sbjct:   49 KRCCKLELSLASLRAFVIKHFLPLGFCVALAVGLGFPLPGAWLAGFEFGGYKLAQSVCIVLIFIVSGLTLKTSEVTAAI--KAWLAYTYGIIAILFLTPFAGLAILQIPFEEPAFGVGFAVFCSVPTTLTSGVTLVNQAAGNGALALMLTVTTNVLGVFTTPLMLALNLRVSGMSAETGTITFDTGALIVKLVATILAPTVFGKLVRESHHSVSDWVAGHKTLLSLTNNSLLICIVWMTIS 287          
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A7S2QY47_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S2QY47_9CHLO)

HSP 1 Score: 180 bits (457), Expect = 6.600e-53
Identity = 105/225 (46.67%), Postives = 142/225 (63.11%), Query Frame = 1
Query:   55 RARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGAKTKV-----------DAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINL 696
            RA+  ++ NFL LGF LAL IGL  P  G  ++ W   G+ +VQT  V+IIFIISG TLKT ++ +A  + GR   A+G+++IL +TPLLGF+ + IP+   +F YGLA+FC VPTTL SGV LV    GN ALAL+LTV TN+ GV TVPF    I R   + +            AV LL+KLL T+L+P+ AGK   + +P      A+HK  L+LT++ +L
Sbjct:   29 RAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSSL 252          
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Match: A0A7S0SJ85_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO)

HSP 1 Score: 184 bits (466), Expect = 1.420e-52
Identity = 105/236 (44.49%), Postives = 145/236 (61.44%), Query Frame = 1
Query:   49 WPRARACILRNFLPLGFGLALIIGLVWPWPGAQVSSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIITILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGNDALALLLTVVTNMTGVITVPFLLKGILRGA-----------KTKVDAVALLIKLLVTVLLPLVAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS 723
            W R +  +LRNFL LGF   + +GL WP PGA++       + + QTC +V IF ISGLTLKT+D+K A       G  +GII IL +TP+LGF++V+IPF   +F YGLA+FC VPTTL SGV LV+   GN ALAL+LTV TN+ GV TVPF+L  +L  A                A+ LLIKL++++++P+  GK+V +     +   A +K+ L L ++  L   VW +VS
Sbjct:    2 WRRWKPWLLRNFLVLGFAAVITLGLSWPLPGAELGDPMAGDFPIAQTCCIVTIFFISGLTLKTADIKNALNEHV--GLVYGIIMILGVTPMLGFLVVQIPFEPIQFRYGLALFCCVPTTLTSGVTLVTSALGNSALALMLTVTTNVLGVFTVPFILNAVLDSAPGNGXXXXXXXSVAKTAMQLLIKLVISIIIPMSIGKSVREFFAVAQKATATYKVELGLVNNSCLIAIVWMSVS 235          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10523.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA3_ECTSI1.060e-7354.02Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ecto... [more]
A0A6H5KQQ7_9PHAE6.950e-7147.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJ89_9STRA1.030e-6554.59Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
A0A836CLX8_9STRA1.960e-5951.15Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
A0A1Y1IAA6_KLENI6.170e-5949.55Sodium Bile acid symporter family n=1 Tax=Klebsorm... [more]
C1E9H5_MICCC1.580e-5542.63Bile Acid:Na+ symporter family n=2 Tax=Micromonas ... [more]
A0A7S0Z714_9CHLO1.820e-5446.15Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A061RZ11_9CHLO3.210e-5347.30Cysteine proteinase cathepsin f n=1 Tax=Tetraselmi... [more]
A0A7S2QY47_9CHLO6.600e-5346.67Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A7S0SJ85_9CHLO1.420e-5244.49Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10523contigP-wetherbeei_contig10523:334..2301 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FQA3
PFAMsSBF_like
Model size723
Max annot lvl2759|Eukaryota
KEGG koko:K14347
KEGG TC2.A.93.1
Hectar predicted targeting categorysignal anchor
Exons4
Evalue1.74e-74
EggNOG OGsCOG0385@1|root,KOG4821@2759|Eukaryota
Descriptionsymporter activity
Cds size723
COG categoryJ
BRITEko00000,ko02000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185873.7296417-CDS-P-wetherbeei_contig10523:333..4951683185873.7296417-CDS-P-wetherbeei_contig10523:333..495Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10523 334..495 +
1683185873.7403076-CDS-P-wetherbeei_contig10523:1138..13771683185873.7403076-CDS-P-wetherbeei_contig10523:1138..1377Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10523 1139..1377 +
1683185873.7544303-CDS-P-wetherbeei_contig10523:1796..19411683185873.7544303-CDS-P-wetherbeei_contig10523:1796..1941Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10523 1797..1941 +
1683185873.7634084-CDS-P-wetherbeei_contig10523:2124..23011683185873.7634084-CDS-P-wetherbeei_contig10523:2124..2301Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10523 2125..2301 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10523.1.1prot_P-wetherbeei_contig10523.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10523 334..2301 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10523.1.1

>prot_P-wetherbeei_contig10523.1.1 ID=prot_P-wetherbeei_contig10523.1.1|Name=mRNA_P-wetherbeei_contig10523.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=241bp
VSQANASSRRCCGSCTWPRARACILRNFLPLGFGLALIIGLVWPWPGAQV
SSWEVAGYKVVQTCNVVIIFIISGLTLKTSDVKKAFGRDGRRGFAFGIIT
ILFLTPLLGFVIVEIPFAIQEFAYGLAVFCVVPTTLASGVALVSQGGGND
ALALLLTVVTNMTGVITVPFLLKGILRGAKTKVDAVALLIKLLVTVLLPL
VAGKAVVDTVPGCRTWVARHKLALSLTSSINLFVFVWPNVS
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mRNA from alignment at P-wetherbeei_contig10523:334..2301+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10523.1.1 ID=mRNA_P-wetherbeei_contig10523.1.1|Name=mRNA_P-wetherbeei_contig10523.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1968bp|location=Sequence derived from alignment at P-wetherbeei_contig10523:334..2301+ (Phaeothamnion wetherbeei SAG_119_79)
GTGTCTCAGGCAAACGCGTCGTCGCGTCGATGCTGTGGGAGCTGCACGTG GCCTCGCGCAAGAGCCTGTATCCTGCGCAACTTCTTGCCTCTGGGCTTCG GTCTCGCGCTCATCATCGGCCTTGTCTGGCCATGGCCCGGCGCACAAGTC AGCTCCTGGGAGGTGCGTGGATCTGGAGACGGGCTCTGGCGACCCTTTTT GCTGTCATCTGCGAACATTAGGGTCTTGGCTATTGTAGGCTTTGCATTTA AATTGTTACAATGGGCGCTTCCTCCGTTCTGAACTTGTTTTGCAATGCTT TGCCGAGTTTCAAAAACCTTACCTGTGATGTCACATGGTGCATTGCTTGC GGTCTATCTGGCCGCCATGGCAACATGTTTCATCAGCAATCGACATGCTT CTGGGAATCGAAAATTTGCCATCTAGAATGGCTGATATTGCGCCTCGCTT TTCCAACCTCTAGGCGGCTCCGCCGGCTTTCTAATGCTGTTTGTGTTACA GTTCACGTAACCTTGCATGGCAGCATTTCTGATTTGAAGCGTGCGTATAC TCTCCCCTTTCTTGCATCTCTTTTCTGGTGGTGGCGGCACCGGTTGGCAA CTCGACTGGGTCCCTACACTACCGAATACTACCACGATGACGGCGGCGCC GGCTGACATCGGCGGCGGCGCTGGTGATGGGGGCGGTGGCGATGGCGGCG CGCGGCCCAACGTGTGTCCGATGATACGTGGGAACAATGGCGTCTATGGC GGCGGAAACCGGCCAATCGAGACGGTATCGCAAACGGAACGGCACACTTT TTCAGGTCGCGGGGTACAAAGTTGTGCAGACATGTAACGTCGTCATTATT TTCATCATCAGCGGCCTCACGCTCAAGACGAGCGACGTCAAAAAGGCCTT TGGCCGCGACGGCCGCCGCGGTTTTGCCTTCGGCATAATTACCATCCTCT TCCTGACGCCGCTGCTGGGGTTCGTCATCGTGGAGATCCCCTTCGCCATC CAAGAGTTTGCGTACGGTCTCGCCGTCTTCTGTGTGGTGCCCACGTGAGT GCTTCGTTGTTGGGAGGTATCAGTCAGAGGGTGGGAATCGACTCAACGTT TGCCATTCATGAGAGCTTGCACCATGGAATGCGGCAGCATCGTCCACGGC GCACTCTCTTGGCTGAAAGCGTCGTTTTAGGTCCCGGGTTTACTTGTAGA TGGCCCTTTCCAACAGAGCTGTGGCGTTGCACGCCTTTGAACGGTTTGGA TGAAACTGGTGGTGCCATTTCATTTTGCGGCAAAGCGGCAGTACTAAATT TGCGGCTTTTCTGCTGATGCGGCTGAACAGAGCGGTTAAGTTGCTGCCAC TACCATAGGTAATCGTGACCTTGTGCGTGCTGCGCATCTCTTTGTATCAT CTCAAAACATGGCATTTGCTCCGCCTGGTCGCGCCAAACTGAAATTGAAA TGAACAACGGCAGGACACTGGCGAGCGGCGTGGCGTTGGTGTCGCAGGGC GGCGGGAACGACGCGCTGGCGCTGCTGCTGACGGTGGTCACCAATATGAC GGGTGTCATCACCGTGCCCTTTTTGCTCAAAGGCATCTTGAGAGGCGCCA AAACCAAGGTGAGGGAAACGCGATGAAGGAAGGAGGGGCACGGTAAGTGG GGGGAAGCGAGGCTTTGGGTCCTGGAATGAGCCACTTCTTTGCTCATGGG CAGCGTGTCCCTTTGTCTCTTGCGCCATGCCTAAGGACTTTCTGATGCAA CAAGAGCCGAAAGCAAAACCTTTTCACAACGATGGAAAAAGGTGGACGCG GTGGCGCTGCTGATCAAGCTGCTGGTAACGGTGCTGCTGCCATTGGTGGC TGGAAAGGCTGTTGTCGACACGGTGCCCGGCTGCCGTACCTGGGTGGCCC GCCACAAGCTGGCGCTGTCCCTGACCAGCTCGATCAACCTCTTCGTCTTC GTGTGGCCAAACGTCAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10523:334..2301+

>mRNA_P-wetherbeei_contig10523.1.1 ID=mRNA_P-wetherbeei_contig10523.1.1|Name=mRNA_P-wetherbeei_contig10523.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig10523:334..2301+ (Phaeothamnion wetherbeei SAG_119_79)
GTGTCTCAGGCAAACGCGTCGTCGCGTCGATGCTGTGGGAGCTGCACGTG
GCCTCGCGCAAGAGCCTGTATCCTGCGCAACTTCTTGCCTCTGGGCTTCG
GTCTCGCGCTCATCATCGGCCTTGTCTGGCCATGGCCCGGCGCACAAGTC
AGCTCCTGGGAGGTCGCGGGGTACAAAGTTGTGCAGACATGTAACGTCGT
CATTATTTTCATCATCAGCGGCCTCACGCTCAAGACGAGCGACGTCAAAA
AGGCCTTTGGCCGCGACGGCCGCCGCGGTTTTGCCTTCGGCATAATTACC
ATCCTCTTCCTGACGCCGCTGCTGGGGTTCGTCATCGTGGAGATCCCCTT
CGCCATCCAAGAGTTTGCGTACGGTCTCGCCGTCTTCTGTGTGGTGCCCA
CGACACTGGCGAGCGGCGTGGCGTTGGTGTCGCAGGGCGGCGGGAACGAC
GCGCTGGCGCTGCTGCTGACGGTGGTCACCAATATGACGGGTGTCATCAC
CGTGCCCTTTTTGCTCAAAGGCATCTTGAGAGGCGCCAAAACCAAGGTGG
ACGCGGTGGCGCTGCTGATCAAGCTGCTGGTAACGGTGCTGCTGCCATTG
GTGGCTGGAAAGGCTGTTGTCGACACGGTGCCCGGCTGCCGTACCTGGGT
GGCCCGCCACAAGCTGGCGCTGTCCCTGACCAGCTCGATCAACCTCTTCG
TCTTCGTGTGGCCAAACGTCAGC
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