mRNA_P-wetherbeei_contig10516.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10516.1.1
Unique NamemRNA_P-wetherbeei_contig10516.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: A0A835YXB0_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXB0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.850e-20
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 1
Query:    7 GKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALRREREQATAEGR 237
            G+Y+GSVLVHC +GVSRSA+IV AYLMK +G++L +A+AYL+ RRP VNPHEAF+ QL ++E  L+   EQ T EG+
Sbjct:   94 GQYHGSVLVHCHKGVSRSASIVAAYLMKEQGMTLREAMAYLKERRPCVNPHEAFMAQLAEYEQRLK---EQRTKEGQ 167          
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: W2L7U5_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2L7U5_PHYPR)

HSP 1 Score: 87.0 bits (214), Expect = 8.100e-18
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 1
Query:    4 QGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALRRE--REQATAEGRAEAFPQ 255
            Q KYYG +LVHC +GVSRS+++VVAYLMK R +S + ALA++  RRP+ NP+E+F RQL+++E  L+R   +++     R  A PQ
Sbjct:   58 QAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARGPAGPQ 143          
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: W2NDU0_PHYPR (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2NDU0_PHYPR)

HSP 1 Score: 87.0 bits (214), Expect = 3.200e-17
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 1
Query:    4 QGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALRRE--REQATAEGRAEAFPQ 255
            Q KYYG +LVHC +GVSRS+++VVAYLMK R +S + ALA++  RRP+ NP+E+F RQL+++E  L+R   +++     R  A PQ
Sbjct:  144 QAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARGPAGPQ 229          
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: A0A6A4G229_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4G229_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 6.170e-17
Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = 1
Query:    4 QGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALRRE--REQATAEGRAEAFPQ 255
            Q KYYG +LVHC +GVSRS+++VVAYLMK R +S + ALA++  RRP+ NP+E+F RQL+++   L+R   +E+     R  A PQ
Sbjct:   92 QAKYYGRILVHCNKGVSRSSSMVVAYLMKLRAMSFEQALAFVTERRPIANPNESFRRQLQEYGRRLQRSAPKEKGARVARGPAGPQ 177          
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: A0A833SA47_PHYIN (Dual specificity phosphatase catalytic domain n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SA47_PHYIN)

HSP 1 Score: 82.8 bits (203), Expect = 7.840e-16
Identity = 41/86 (47.67%), Postives = 62/86 (72.09%), Query Frame = 1
Query:    4 QGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALRRE--REQATAEGRAEAFPQ 255
            Q K+YG +LVHC +GVSRS+++VVAYLMK R +S + ALA++  RR + NP+E+F RQL+++E  L+R   ++++    R  A PQ
Sbjct:  111 QAKFYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVAERRSIANPNESFRRQLQEYERRLQRSAPKDKSARVARGPAGPQ 196          
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: A0A067D610_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D610_SAPPC)

HSP 1 Score: 81.6 bits (200), Expect = 1.020e-15
Identity = 38/67 (56.72%), Postives = 54/67 (80.60%), Query Frame = 1
Query:    4 QGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALR 204
            Q ++YG VLVHC+QGVSRSA+IVVAY+M+ + LS D+ALA+++ RRP   P+ +FL+QL  +EV L+
Sbjct:   88 QAQFYGKVLVHCKQGVSRSASIVVAYVMRTKELSRDEALAFVQARRPEAQPNGSFLKQLLQYEVRLK 154          
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: A0A329RXR8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RXR8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.480e-15
Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1
Query:    4 QGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALRRE--REQATAEGRAEAFPQ 255
            Q KYYG +LVHC +GVSRS+++VVAYLMK R +S + ALA++  RR + NP+E+F RQL+++   L+R   ++++    R  A PQ
Sbjct:   91 QAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVVERRSIANPNESFRRQLQEYGRRLQRSAPKDKSARAARGPAGPQ 176          
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: K3WZQ8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZQ8_GLOUD)

HSP 1 Score: 82.4 bits (202), Expect = 2.500e-15
Identity = 38/68 (55.88%), Postives = 54/68 (79.41%), Query Frame = 1
Query:    4 QGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALRR 207
            Q KYYG +LVHC +GVSRS ++VVAYLMK + +SLDDALA++ +RR + NP+ +F +QL+++   LRR
Sbjct:   89 QAKYYGRILVHCNKGVSRSTSMVVAYLMKIKDMSLDDALAFVTKRRSMANPNPSFRQQLQEYGQRLRR 156          
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: T0QIZ1_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QIZ1_SAPDV)

HSP 1 Score: 81.6 bits (200), Expect = 5.300e-15
Identity = 38/67 (56.72%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    4 QGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALR 204
            Q ++YG VLVHC+QGVSRSA+IVVAY+M+ + LS DDAL +++ RRP   P+ +FL+QL  +EV L+
Sbjct:  225 QAQFYGKVLVHCKQGVSRSASIVVAYVMRTKELSRDDALTFVQARRPEAQPNGSFLKQLLQYEVRLK 291          
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Match: A0A225W435_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W435_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 8.650e-15
Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = 1
Query:    4 QGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVVNPHEAFLRQLRDFEVALRR 207
            Q KYYG +LVHC +GVSRS+++VVAYLMK R ++ + ALA++  RR + NP+E+F RQL++F   L R
Sbjct:   89 QAKYYGRILVHCNKGVSRSSSVVVAYLMKTRSMTFEQALAHVVERRSMANPNESFRRQLQEFGRRLER 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10516.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXB0_9STRA4.850e-2061.04Protein-tyrosine phosphatase-like protein n=1 Tax=... [more]
W2L7U5_PHYPR8.100e-1850.00Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
W2NDU0_PHYPR3.200e-1750.00Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A6A4G229_9STRA6.170e-1750.00Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A833SA47_PHYIN7.840e-1647.67Dual specificity phosphatase catalytic domain n=2 ... [more]
A0A067D610_SAPPC1.020e-1556.72Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A329RXR8_9STRA2.480e-1547.67Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
K3WZQ8_GLOUD2.500e-1555.88Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
T0QIZ1_SAPDV5.300e-1556.72Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
A0A225W435_9STRA8.650e-1554.41Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10516contigP-wetherbeei_contig10516:7..705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G0E2
Preferred nameDUSP28
PFAMsDSPc
Model size543
Max annot lvl2759|Eukaryota
KEGG koko:K04459,ko:K14165
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.5e-25
EggNOG OGsCOG2453@1|root,KOG1716@2759|Eukaryota
EC3.1.3.16,3.1.3.48
Descriptionprotein tyrosine/serine/threonine phosphatase activity
Cds size543
COG categoryT
BRITEko00000,ko00001,ko01000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185873.599835-CDS-P-wetherbeei_contig10516:6..2951683185873.599835-CDS-P-wetherbeei_contig10516:6..295Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10516 7..295 +
1683185873.608737-CDS-P-wetherbeei_contig10516:451..7051683185873.608737-CDS-P-wetherbeei_contig10516:451..705Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10516 452..705 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10516.1.1prot_P-wetherbeei_contig10516.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10516 7..705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10516.1.1

>prot_P-wetherbeei_contig10516.1.1 ID=prot_P-wetherbeei_contig10516.1.1|Name=mRNA_P-wetherbeei_contig10516.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp
MQGKYYGSVLVHCRQGVSRSAAIVVAYLMKARGLSLDDALAYLRRRRPVV
NPHEAFLRQLRDFEVALRREREQATAEGRAEAFPQDLFGDGGGDGGAPVA
GPVRGPQAPARGPQIPVRGPQAPAARRPQVQVHSPHAPACGAQAPARGPQ
QSSSPPRPAAGLGGGAAGRRPASGPAAGPAP
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mRNA from alignment at P-wetherbeei_contig10516:7..705+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10516.1.1 ID=mRNA_P-wetherbeei_contig10516.1.1|Name=mRNA_P-wetherbeei_contig10516.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig10516:7..705+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGGAAAGTACTACGGCAGCGTGCTCGTCCACTGCCGGCAGGGAGT CTCCCGCAGCGCCGCCATTGTCGTCGCCTACCTTATGAAAGCGCGCGGCC TCTCGCTTGACGACGCGCTGGCTTACCTCCGCCGCCGCCGGCCTGTAGTC AACCCGCACGAGGCGTTCCTGCGGCAGCTCCGCGACTTCGAGGTGGCGCT GCGGCGAGAGCGGGAGCAGGCGACCGCGGAGGGCCGCGCCGAGGCCTTCC CGCAGGACCTTTTTGGCGATGGCGGCGGCGACGGCGGCGGTCCAGCTGGC GGCAGCGGCAGCGGTGCAGCTGGCAGCACAGCTGGCGGCGTGGGCGGCGG GGACGCTGGGGCGGCGATTTGCGGCAGTGCGGGGGCAGCGGCTGCGGGGA GCAGCGGTGGCGGCGGCACCAGTGGTGCTCCTGGTGCGGCACAAGCACCG GTTGCAGGGCCGGTACGCGGTCCGCAGGCTCCCGCACGCGGTCCGCAGAT TCCGGTACGCGGTCCGCAGGCTCCCGCCGCACGCCGTCCGCAGGTTCAGG TACACAGTCCGCATGCTCCCGCATGCGGCGCGCAGGCACCGGCGCGCGGT CCGCAGCAGTCGTCGTCTCCGCCGCGGCCAGCCGCTGGACTTGGGGGGGG GGCCGCTGGAAGGAGGCCAGCGTCGGGACCCGCCGCAGGACCTGCACCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10516:7..705+

>mRNA_P-wetherbeei_contig10516.1.1 ID=mRNA_P-wetherbeei_contig10516.1.1|Name=mRNA_P-wetherbeei_contig10516.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig10516:7..705+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGGAAAGTACTACGGCAGCGTGCTCGTCCACTGCCGGCAGGGAGT
CTCCCGCAGCGCCGCCATTGTCGTCGCCTACCTTATGAAAGCGCGCGGCC
TCTCGCTTGACGACGCGCTGGCTTACCTCCGCCGCCGCCGGCCTGTAGTC
AACCCGCACGAGGCGTTCCTGCGGCAGCTCCGCGACTTCGAGGTGGCGCT
GCGGCGAGAGCGGGAGCAGGCGACCGCGGAGGGCCGCGCCGAGGCCTTCC
CGCAGGACCTTTTTGGCGATGGCGGCGGCGACGGCGGCGCACCGGTTGCA
GGGCCGGTACGCGGTCCGCAGGCTCCCGCACGCGGTCCGCAGATTCCGGT
ACGCGGTCCGCAGGCTCCCGCCGCACGCCGTCCGCAGGTTCAGGTACACA
GTCCGCATGCTCCCGCATGCGGCGCGCAGGCACCGGCGCGCGGTCCGCAG
CAGTCGTCGTCTCCGCCGCGGCCAGCCGCTGGACTTGGGGGGGGGGCCGC
TGGAAGGAGGCCAGCGTCGGGACCCGCCGCAGGACCTGCACCG
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