mRNA_P-wetherbeei_contig10514.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: A0A3C0TS73_9PROT (Cytochrome c-type biogenesis protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TS73_9PROT) HSP 1 Score: 122 bits (306), Expect = 8.070e-34 Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALWAGQRRR-----EAPVLQPLTEAEQAKLREIT 267 LAGDLRRIVRERVAAG+TD QVRAHLVAR+GDWVLMRPP +LSTL LW GPP+LL+ GG+ LW RRR EAP LT E+A++ ++T Sbjct: 49 LAGDLRRIVRERVAAGETDDQVRAHLVARFGDWVLMRPPLRLSTLALWGGPPLLLLTGGLMLWVNLRRRQQMAPEAPA--DLTPQERARIDQLT 140
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: A0A353LQM4_9PROT (Cytochrome c-type biogenesis protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LQM4_9PROT) HSP 1 Score: 103 bits (257), Expect = 2.970e-26 Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALWAGQRR-REAPVLQPLTEAEQAKLREIT 267 LA DLR+IVR+R+ AGD+D++VR LV RYG+WVLMRPPFKL+TL+LW GP +LL +GGIAL G RR ++ Q L+ E+A++ +T Sbjct: 62 LAQDLRKIVRQRIEAGDSDAEVRQFLVDRYGEWVLMRPPFKLTTLLLWLGPVLLLAVGGIALLIGIRRGKQVQQAQALSPEEEARIEALT 151
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: A0A2S9QFG3_9HYPH (Cytochrome c-type biogenesis protein n=4 Tax=Labrys TaxID=204476 RepID=A0A2S9QFG3_9HYPH) HSP 1 Score: 103 bits (256), Expect = 3.990e-26 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALWAGQRRREAPVLQPLTEAEQAKLREITAPD 276 LA DLR +VRER+ AGD+D++V+ LVARYGD++L++PP + TL LW+GPP LL+LGGIA++ RRR+A PL+ EQA++ +I D Sbjct: 60 LAKDLRILVRERLKAGDSDAEVKDFLVARYGDFILLKPPLEWRTLALWSGPPALLLLGGIAIFLSTRRRQAAAPAPLSSDEQARIDDILGRD 151
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: A0A521W052_9HYPH (Cytochrome c-type biogenesis protein n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521W052_9HYPH) HSP 1 Score: 100 bits (250), Expect = 4.800e-25 Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALWAGQRRREAPV-----LQPLTEAEQAKLREITAPD 276 LA DLR +VRER+ AGD+D QV LVARYG++VL++P F+L TL+LW PP +LVLG +ALW RRR AP + PL+ EQ +LR + + D Sbjct: 67 LARDLRLLVRERIGAGDSDGQVINFLVARYGEFVLLKPRFELHTLLLWGVPPAVLVLGALALWVNARRRRAPASSVPEIAPLSAEEQRRLRRLISDD 163
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: UPI00146B9DE1 (cytochrome c-type biogenesis protein CcmH n=1 Tax=Sneathiella chinensis TaxID=349750 RepID=UPI00146B9DE1) HSP 1 Score: 99.8 bits (247), Expect = 7.610e-25 Identity = 51/89 (57.30%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALWAGQRRREAP----VLQPLTEAEQAKL 255 LA DLR +VRERVAAGDTD QVR +LV RYGDWVL+ PPFK+ T +LW GP V+ +LGG+A A RRR + +Q L+ EQ +L Sbjct: 44 LARDLRGVVRERVAAGDTDDQVRDYLVVRYGDWVLLNPPFKMKTALLWVGPAVIFLLGGLAAIAFLRRRSSAGGGEAVQRLSPEEQEEL 132
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: UPI000780F5A4 (cytochrome c-type biogenesis protein CcmH n=1 Tax=Aureimonas sp. AU4 TaxID=1638163 RepID=UPI000780F5A4) HSP 1 Score: 99.0 bits (245), Expect = 1.840e-24 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALWAGQRRREAPVLQPLTEAEQAKLREITAPD 276 LA DLR +VR+R+ AGD+D VR +LVARYG +VL+RP + T+ LW P VLLV GG+ W+ +RR A +PL+EAE+ +LR +TA D Sbjct: 60 LAKDLRVLVRQRLQAGDSDEGVRDYLVARYGQFVLLRPRLEWETIALWGTPAVLLVFGGVLAWSARRRARAMETEPLSEAEERELRRLTAED 151
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: A0A1Y5REW9_9PROT (Cytochrome c-type biogenesis protein n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5REW9_9PROT) HSP 1 Score: 97.8 bits (242), Expect = 7.550e-24 Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALWAGQRRRE-----APVLQPLTEAEQAKLREITA 270 LA DLR +VRER+AAGD+D QVR ++VARYGDWVL+ PPFKL T +LW GP +LL+LG + +W RR A PL+ E KL + A Sbjct: 63 LARDLRILVRERIAAGDSDEQVRDYVVARYGDWVLLNPPFKLGTYLLWIGPFILLILGAVGVWIFLRRARVRYTAAAAPTPLSGEETEKLDRLLA 157
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: UPI00131C003E (cytochrome c-type biogenesis protein CcmH n=1 Tax=Methylocapsa sp. S129 TaxID=1641869 RepID=UPI00131C003E) HSP 1 Score: 97.1 bits (240), Expect = 1.110e-23 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALWAGQRRRE--APVLQPLTEAEQAKLRE 261 LA D+R ++R+R+A G+++ VR LV+RYGD++L+ PPFK TL+LWAG P+ L+LG +ALW RRRE AP L P EA A + E Sbjct: 61 LARDIRLLIRDRIAKGESNEAVRGFLVSRYGDFILLNPPFKPETLLLWAGAPLALILGALALWRAARRREEAAPALSPAEEARLAAIAE 149
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: A0A1Y5E3V7_9PROT (Cytochrome c-type biogenesis protein n=1 Tax=Alphaproteobacteria bacterium 46_93_T64 TaxID=1856292 RepID=A0A1Y5E3V7_9PROT) HSP 1 Score: 97.1 bits (240), Expect = 1.330e-23 Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALWAGQRRREAP-----VLQPLTEAEQAKLREITAPD 276 LA DLR IVRER+ AGDTD QV+ +LV+RYGDWVL+ PPFK+ TLVLW P ++L+ GG + RR+ A V +PLT+AE+ ++ A D Sbjct: 58 LARDLRAIVRERILAGDTDDQVQNYLVSRYGDWVLLNPPFKMRTLVLWLSPMLVLLFGGFLVVRFLRRKSAAPTENSVSRPLTDAEKKTFDQLMAED 154
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Match: A0A512N8J0_9HYPH (Cytochrome c-type biogenesis protein n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512N8J0_9HYPH) HSP 1 Score: 97.1 bits (240), Expect = 1.400e-23 Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 1 LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGPPVLLVLGGIALW-AGQRRREAPVLQPLTEAEQAKL 255 +A D+RR VR+R+ AGDTD QV ++VARYGD+VL++PPFK TLVLW G P +L+LG I LW A RR A PL++AE+A+L Sbjct: 60 VAHDIRRAVRQRLVAGDTDRQVLDYMVARYGDYVLLKPPFKARTLVLWLGTPAVLLLGMIGLWFAAGRRSTAVGSAPLSDAERARL 145 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10514.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10514.1.1 >prot_P-wetherbeei_contig10514.1.1 ID=prot_P-wetherbeei_contig10514.1.1|Name=mRNA_P-wetherbeei_contig10514.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp LAGDLRRIVRERVAAGDTDSQVRAHLVARYGDWVLMRPPFKLSTLVLWAGback to top mRNA from alignment at P-wetherbeei_contig10514:5..283+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10514.1.1 ID=mRNA_P-wetherbeei_contig10514.1.1|Name=mRNA_P-wetherbeei_contig10514.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig10514:5..283+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10514:5..283+ >mRNA_P-wetherbeei_contig10514.1.1 ID=mRNA_P-wetherbeei_contig10514.1.1|Name=mRNA_P-wetherbeei_contig10514.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig10514:5..283+ (Phaeothamnion wetherbeei SAG_119_79)back to top |