mRNA_P-wetherbeei_contig10507.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: A0A1Y2R4Z1_9BURK (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R4Z1_9BURK) HSP 1 Score: 386 bits (992), Expect = 3.470e-133 Identity = 199/221 (90.05%), Postives = 212/221 (95.93%), Query Frame = 1 Query: 1 MNDSHNMSRRAATLRLAAMAGGAAGLVAAPSLALAQTNWPERPITLIAPFGGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPALGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPSSI 663 M DSH++SRR ATLRLAA+AGGAA + A PSLA AQ+ +PERPITLIAPFGGAVDFLARQIA+HMAKT+NGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKN GYDV +SFTYLGLIQTTRQVLVV+PALGVNTV+EFIALAKS+PGKLNFGSSGIGNSIHLAAEQFNADVGIQAVH+PYKTGPETDAAIMAGDVHYAWQSVPSSI Sbjct: 1 MKDSHSISRRTATLRLAALAGGAASIGALPSLAFAQSGYPERPITLIAPFGGAVDFLARQIALHMAKTMNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNTGYDVVKSFTYLGLIQTTRQVLVVAPALGVNTVSEFIALAKSKPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHIPYKTGPETDAAIMAGDVHYAWQSVPSSI 221
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: A0A2J7VZK7_9BURK (Uncharacterized protein n=5 Tax=unclassified Variovorax TaxID=663243 RepID=A0A2J7VZK7_9BURK) HSP 1 Score: 299 bits (766), Expect = 6.790e-99 Identity = 156/211 (73.93%), Postives = 184/211 (87.20%), Query Frame = 1 Query: 37 TLRLAAMAGG--AAGLVAAPSLALAQTNWPERPITLIAPFGGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPALGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPSSI 663 T R A ++GG AA L A P ALAQ +PE+PITL++PFGGAVDFLAR I V + + LNG++IVD+KLGGSGTIGL+ VARAAPDGYTIGMGTSTA+TSAPHLIK+PGYDV +SFTYLGLIQT+RQVLVVSP LGVNT+AEFIALAKS+PG LNFGSSGIGNSIHLAAE+FN+ VGI+AVH+P+K GPETDAAI+ G+V Y + SVP+S+ Sbjct: 8 TRRTAIISGGLAAASLGAMPLAALAQGAYPEKPITLVSPFGGAVDFLARLIVVQLNQRLNGNVIVDLKLGGSGTIGLAHVARAAPDGYTIGMGTSTALTSAPHLIKSPGYDVARSFTYLGLIQTSRQVLVVSPQLGVNTLAEFIALAKSKPGALNFGSSGIGNSIHLAAEEFNSAVGIKAVHIPFKAGPETDAAIIGGEVQYTFASVPTSL 218
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: UPI00131E29C8 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131E29C8) HSP 1 Score: 291 bits (745), Expect = 1.220e-95 Identity = 152/217 (70.05%), Postives = 182/217 (83.87%), Query Frame = 1 Query: 13 HNMSRRAATLRLAAMAGGAAGLVAAPSLALAQTNWPERPITLIAPFGGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPALGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPSSI 663 H +SRR A L A+ GAA L A P +LAQ+++P PITL+ PFGGAVDFLAR IA H+ LN S++V+ +LGGSGTIG++ +ARA PDGYT+GMGTSTAMTSAP LIKNPGYDV SFTYLG+IQT+RQVL VSPALGVNT+AEFIALAKS+PG+LNFGSSGIGNSIHLAAE+FN+ VGI+AVH+P+KTG ETDAAI+ G+V Y + SVP+SI Sbjct: 9 HPISRRTALGGLGAL--GAAALGATPLASLAQSDFPSHPITLVCPFGGAVDFLARLIAYHLGPRLNTSIVVEQRLGGSGTIGMAHIARANPDGYTLGMGTSTAMTSAPFLIKNPGYDVATSFTYLGIIQTSRQVLEVSPALGVNTLAEFIALAKSKPGQLNFGSSGIGNSIHLAAEEFNSAVGIKAVHIPFKTGQETDAAIIGGEVQYTFASVPTSI 223
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: A0A244E5P2_9BURK (Uncharacterized protein n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A244E5P2_9BURK) HSP 1 Score: 288 bits (737), Expect = 1.700e-94 Identity = 150/213 (70.42%), Postives = 177/213 (83.10%), Query Frame = 1 Query: 25 RRAATLRLAAMAGGAAGLVAAPSLALAQTNWPERPITLIAPFGGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPALGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPSSI 663 RRAA ++AA G A L A P LAQ NWPE+PITLI+PFGGAVD LAR IA + + L ++IVD+KLGGSGTIG++AVARA PDGYTIGMGT+T++TSAPHLIKNPGYDV +SFTYLGLIQT+RQVL VSP LGV+T+ +FIALAK++PG LNFGSSG+GNSIHLA EQFNA GI+AVHVPYKTG ETDAA+MAGDV Y S+ +S+ Sbjct: 8 RRAALFQIAA---GTAALAAFPGRLLAQGNWPEKPITLISPFGGAVDILARLIAADLGRRLGQNVIVDLKLGGSGTIGMAAVARAQPDGYTIGMGTTTSLTSAPHLIKNPGYDVEKSFTYLGLIQTSRQVLTVSPKLGVDTLQDFIALAKAKPGTLNFGSSGVGNSIHLAVEQFNAAAGIKAVHVPYKTGNETDAAMMAGDVQYTIASLATSL 217
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: A0A1H4HAT0_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1H4HAT0_9BURK) HSP 1 Score: 278 bits (710), Expect = 2.100e-90 Identity = 145/213 (68.08%), Postives = 174/213 (81.69%), Query Frame = 1 Query: 25 RRAATLRLAAMAGGAAGLVAAPSLALAQTNWPERPITLIAPFGGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPALGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPSSI 663 RR A +R+AA GAA L +P LAQ WPERPITLI PFGGAVD LAR IA + L ++IV+ K+GGSGTIG++AVARA PDGYTIGMGT+T++TSAPHLIK+PGYDV +SFTYLGLIQT+RQVL VSP LGV+T+ +FIALAKS+PG LNFGSSG+GNSIHLA EQFNA VGI+AVHVP+KTG ETD A++AG+V Y S+ +S+ Sbjct: 8 RRTALVRIAA---GAAALAVSPGRLLAQGTWPERPITLITPFGGAVDILARLIAADLGGRLGQTVIVEQKIGGSGTIGMAAVARARPDGYTIGMGTTTSLTSAPHLIKSPGYDVEKSFTYLGLIQTSRQVLTVSPKLGVDTLQDFIALAKSKPGTLNFGSSGVGNSIHLAVEQFNAAVGIKAVHVPFKTGNETDTAMIAGEVQYTIASLATSL 217
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: A0A1I4CFU8_9PROT (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Roseomonas stagni DSM 19981 TaxID=1123062 RepID=A0A1I4CFU8_9PROT) HSP 1 Score: 161 bits (408), Expect = 4.890e-45 Identity = 90/199 (45.23%), Postives = 122/199 (61.31%), Query Frame = 1 Query: 70 AGLVAAPSLALAQTNWPERPITLIAPF--GGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPALGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPSS 660 A L+AAPS+A AQ WP RPI ++ PF GG D AR M++ L +++D + G G IG RAAPDGYTI + ++ +T +L K+ +D + +GLI Q+LVV P L N VAEFIALAK+RPG LN+GS+G G+S+HLAAE F G+ HVPY+ G A +MAG++ + S+PSS Sbjct: 9 AALLAAPSIASAQGAWPNRPIRVVVPFAAGGGTDVSARIYVARMSEILGQQLVIDNRGGSGGNIGQEQFTRAAPDGYTILLTSNGPLTVNRYLYKDMNHDPLRDLLPIGLILRIEQLLVVHPDLPANNVAEFIALAKARPGALNYGSAGAGSSLHLAAELFKLRAGVNLTHVPYRGGGPAMADLMAGNIQAMFDSMPSS 207
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: A0A1I5NW29_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Variovorax sp. 770b2 TaxID=1566271 RepID=A0A1I5NW29_9BURK) HSP 1 Score: 161 bits (408), Expect = 6.420e-45 Identity = 90/203 (44.33%), Postives = 125/203 (61.58%), Query Frame = 1 Query: 61 GGAAGLVAAPSLALAQTNWPERPITLIAPF--GGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPALGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPSSI 663 G A L P+ +T++P +P+T++ PF GGA D AR IA + L + +VD + G SG IG++AVARAAPDGYT+G G ++ M+ APHL+KNP YD ++F + L + +LV P L V +VA+ +ALAK +PGKL F SSG G++ HL E F + GI +HVPYK + A+MAG V S SS+ Sbjct: 17 GTLATLGTGPAALAQETDYPRKPVTIVVPFTAGGATDLSARLIAQLLTTQLGQTFLVDNRAGASGMIGMAAVARAAPDGYTLGWGGNSPMSVAPHLVKNPAYDPAKAFAPVSLAAISSWILVTRPDLPVKSVADLVALAKKQPGKLTFASSGNGSAPHLMGELFKSAAGIDLLHVPYKGEIDGFNAMMAGQVDMMMGSTSSSL 219
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: D5RJX6_9PROT (Tat pathway signal sequence domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 TaxID=525371 RepID=D5RJX6_9PROT) HSP 1 Score: 159 bits (402), Expect = 4.560e-44 Identity = 91/214 (42.52%), Postives = 136/214 (63.55%), Query Frame = 1 Query: 25 RRAATLRLAAMAGGAAGLVAAPSLALAQTNWPERPITLIAPF--GGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPA-LGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPS 657 +R LR AA+ GAAG +A P LA AQ+ WPERP+ LI P+ GGA D L R A ++++L ++++ + G SG IG+ AVA+AAPDGYTIG GT + + +L +N YDV + + L + VV+P + ++AEFIA AK++PG + +GS+GIG + HL++ F + +G++AVHVPY+ +T A++ GDV +A V S Sbjct: 2 QRRTLLRTAAL--GAAGSLALPGLARAQSRWPERPVRLIVPYPPGGATDVLGRLYAEQLSRSLGQPVVIENRPGASGNIGIDAVAKAAPDGYTIGAGTVSNFSINQYLYRNVPYDVERDLAPVALGWEFPNIAVVAPGKVPATSLAEFIAWAKAKPGGITYGSTGIGTTTHLSSALFFSRIGVEAVHVPYRGASQTIPALLNGDVDFAIDGVAS 213
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: A0A1I1DK25_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Polaromonas sp. OV174 TaxID=1855300 RepID=A0A1I1DK25_9BURK) HSP 1 Score: 158 bits (400), Expect = 8.620e-44 Identity = 90/202 (44.55%), Postives = 121/202 (59.90%), Query Frame = 1 Query: 64 GAAGLVAAPSLALAQTNWPERPITLIAPF--GGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPALGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPSSI 663 G A LVAA A AQT WPERP+ L+ PF GGA D +AR IA ++K + ++VD K G GTIG + A+AAPDGYT+ + TS+ +PHL+ YD + FT L + V++V+P+L V TVAE IA AK PG+LN+ SSG G +HL E F A G+ HVPYK +++G VH S+P+ + Sbjct: 12 GLASLVAATVAAQAQT-WPERPVRLVVPFPAGGATDLVARVIAQRVSKDIGQQIVVDNKAGAGGTIGSAEAAKAAPDGYTLLLTTSSTHAISPHLMSRLPYDPVKDFTPLAHLADAASVVLVTPSLPVKTVAELIAYAKKNPGQLNYASSGNGTIVHLTTEAFKAQAGVFITHVPYKGTGLAIPDVISGSVHMLIDSIPTGM 212
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Match: A0A5A9XC18_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Pusillimonas sp. ANT_WB101 TaxID=2597356 RepID=A0A5A9XC18_9BURK) HSP 1 Score: 155 bits (393), Expect = 1.150e-42 Identity = 81/194 (41.75%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 82 AAPSLALAQTNWPERPITLIAPF--GGAVDFLARQIAVHMAKTLNGSMIVDVKLGGSGTIGLSAVARAAPDGYTIGMGTSTAMTSAPHLIKNPGYDVTQSFTYLGLIQTTRQVLVVSPALGVNTVAEFIALAKSRPGKLNFGSSGIGNSIHLAAEQFNADVGIQAVHVPYKTGPETDAAIMAGDVHYAWQSVPS 657 AA + A+ ++P+ PI+++ P+ GG D ++R +A ++K L ++I++ + G SG IG V +A PDGYT+GMG ST++T AP+L P YD T +G++ +LVVSP T+ EF+ LA+S+PG+LNFGSSGIG+ H+ A +FN + I A HVP+K G E+ ++AG++ Y ++SV S Sbjct: 26 AAAPIVNAEDSYPDHPISIVVPYSPGGTTDLISRILAEGLSKDLGQAVIIENRAGASGMIGTGIVVKAKPDGYTLGMGGSTSLTVAPYLRSLPPYDSRTDLTPIGMVAGGPFILVVSPKSEAQTLKEFVKLARSKPGELNFGSSGIGSMHHILAVKFNQMMDIDATHVPFKGGVESATNLVAGNIDYLFESVSS 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10507.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10507.3.1 >prot_P-wetherbeei_contig10507.3.1 ID=prot_P-wetherbeei_contig10507.3.1|Name=mRNA_P-wetherbeei_contig10507.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp MNDSHNMSRRAATLRLAAMAGGAAGLVAAPSLALAQTNWPERPITLIAPFback to top mRNA from alignment at P-wetherbeei_contig10507:1669..2331+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10507.3.1 ID=mRNA_P-wetherbeei_contig10507.3.1|Name=mRNA_P-wetherbeei_contig10507.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig10507:1669..2331+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10507:1669..2331+ >mRNA_P-wetherbeei_contig10507.3.1 ID=mRNA_P-wetherbeei_contig10507.3.1|Name=mRNA_P-wetherbeei_contig10507.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig10507:1669..2331+ (Phaeothamnion wetherbeei SAG_119_79)back to top |