mRNA_P-wetherbeei_contig105.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A3C0TVL0_9PROT (DNA-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TVL0_9PROT) HSP 1 Score: 112 bits (279), Expect = 1.200e-29 Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGVATPVPVARADLSQLVARLEAI 273 MALFFDQ WFDA+L +RGLDR +LA +LG+ +++DMWKDQREI+ REV LLAELLGVS ++IA GGVATP+P A+ L + L I Sbjct: 1 MALFFDQEWFDARLGERGLDRPSLAVILGLHPEEIEDMWKDQREISAREVLLLAELLGVSVQDIARYGGVATPLPGAQTALGEKAEALARI 91
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A2E1EGS3_9HYPH (DNA-binding protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2E1EGS3_9HYPH) HSP 1 Score: 104 bits (260), Expect = 1.000e-26 Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGVATPVPVARADLSQ------LVARLEAI 273 MALFFDQ WFDAKL + GL R +A LG+S +D++WKDQRE+ PREV+LLA+LLG + E+A + GV+TPVP A+A L+ARL+A+ Sbjct: 1 MALFFDQEWFDAKLGEAGLTRDTVATALGLSRVQVDEIWKDQRELAPREVSLLAQLLGAAPAEVANKAGVSTPVPAAQAPSPSAEGQQALMARLDAM 97
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A2N3BZQ0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-3 TaxID=2013666 RepID=A0A2N3BZQ0_9PROT) HSP 1 Score: 99.4 bits (246), Expect = 1.220e-24 Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGVATPVPVARADLSQ---LVARLEAIXXXXXXXXXXXEHAVAEIRA 333 MALFFDQ WFDAKL+Q G R +A+ LG+S A++D++WKDQRE+ R+V++LA LL S+ E+A + G++TPVP A A S L+ +L+A+ E AVA++++ Sbjct: 1 MALFFDQEWFDAKLKQAGRTRDDVASALGLSRAEIDEIWKDQRELASRDVSVLAGLLAASSVEVANKAGISTPVPAAPAQASSDAALMTKLDAMDLRLARI----ERAVADLQS 110
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A8D5WNP7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium SO-S41 TaxID=2829083 RepID=A0A8D5WNP7_9PROT) HSP 1 Score: 96.3 bits (238), Expect = 1.200e-23 Identity = 46/90 (51.11%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGVATPVPVARADLSQLVARLEA 270 MALFFDQTWFDA+L +R L RA L A+LG+ + ++WKDQRE+ +V+L+A LL +S EIA R G++TPVPV + + + +A +EA Sbjct: 1 MALFFDQTWFDAQLAERHLRRADLGAMLGLDETGIGEVWKDQRELKAADVSLIAALLNLSPAEIAHRAGISTPVPVEASGVERRLAAIEA 90
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A4Q3RZW2_9CAUL (XRE family transcriptional regulator n=1 Tax=Caulobacteraceae bacterium TaxID=1978230 RepID=A0A4Q3RZW2_9CAUL) HSP 1 Score: 94.0 bits (232), Expect = 1.100e-22 Identity = 55/95 (57.89%), Postives = 68/95 (71.58%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGVATPVP----VAR-ADLSQLVARLEA 270 MALFFD W++A+L +RGL RA LAAV G+S ADL ++KDQRE++ EV AELLGVS E A R GV+TPVP +AR A+L + VA LEA Sbjct: 1 MALFFDVDWYEARLAERGLSRAVLAAVSGLSEADLALVFKDQRELSAAEVAAFAELLGVSPVEAAVRAGVSTPVPGSDPLARIAELERRVAALEA 95
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A1E4GVB2_9CAUL (HTH cro/C1-type domain-containing protein n=1 Tax=Phenylobacterium sp. SCN 70-31 TaxID=1660129 RepID=A0A1E4GVB2_9CAUL) HSP 1 Score: 94.0 bits (232), Expect = 1.750e-22 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGVATPVPVARAD 240 MALFFD WFD KL++RGL R LAAV G+S ADL ++KDQ E++ +V AELLGV+ +E+A R GV+TP PV+ AD Sbjct: 1 MALFFDAPWFDGKLEERGLSRTVLAAVAGLSEADLALVFKDQGELSAGQVAAFAELLGVTAEEVANRAGVSTPTPVSDAD 80
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A328AEW1_9CAUL (DNA-binding protein n=1 Tax=Phenylobacterium soli TaxID=2170551 RepID=A0A328AEW1_9CAUL) HSP 1 Score: 93.2 bits (230), Expect = 2.200e-22 Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGVATPVPVA 231 MALFFD WFDA+L +RGL RA LAA G+S ADL ++KDQRE++ +EV AELLGV+ E+A+R G++TP+P A Sbjct: 1 MALFFDAEWFDARLGERGLSRAVLAAAAGLSEADLALVFKDQRELSAQEVACFAELLGVAAAEVADRAGISTPLPGA 77
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A6G4R0Z3_9CAUL (DNA-binding protein n=1 Tax=Caulobacter sp. 602-2 TaxID=2710887 RepID=A0A6G4R0Z3_9CAUL) HSP 1 Score: 93.2 bits (230), Expect = 2.530e-22 Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGV---ATPV-PVAR--ADLSQLVARLE 267 MALFFD W+DA+L +RGLDRAALAA G+S A++ ++KDQREI P E+ + AE++GVS +E A R GV A P P AR A+L VARLE Sbjct: 1 MALFFDHQWYDARLAERGLDRAALAAAAGLSAAEIGLVFKDQREIRPAELAVFAEMVGVSREEAARRAGVGAHAAPADPAARRIAELEARVARLE 95
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A2N3E1Z1_9PROT (DNA-binding protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E1Z1_9PROT) HSP 1 Score: 93.2 bits (230), Expect = 3.240e-22 Identity = 51/115 (44.35%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGVATPVPVARA----DLSQLVARLEAIXXXXXXXXXXXEHAVAEIRA 333 MALFFDQ WFDAKL++ G R +A+VLG+S A+++++WKDQRE+ +V++LA LL S+ E+A + G++TPVP A A D S + A+L+A+ E AVA++++ Sbjct: 1 MALFFDQEWFDAKLREAGRTRDDVASVLGLSRAEVEEIWKDQRELASGDVSILAGLLAASSAEVANKAGISTPVPAAPARDGGDAS-VTAKLDAMDARLARI----ERAVADLQS 110
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Match: A0A2G5RFX6_9CAUL (DNA-binding protein n=2 Tax=unclassified Caulobacter TaxID=2648921 RepID=A0A2G5RFX6_9CAUL) HSP 1 Score: 92.0 bits (227), Expect = 5.620e-22 Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 1 Query: 1 MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVTLLAELLGVSTKEIAERGGVATPVPVARADLSQLVARLE 267 MALFFDQ W+DA+L +RGLDRA LAA G+S A+L +KDQRE++ REV++ AELLGVS E A R GV P P++ A Q +A LE Sbjct: 1 MALFFDQAWYDARLAERGLDRAVLAAAAGLSPAELALAFKDQRELSMREVSVFAELLGVSAAEAASRAGVRPP-PISDA---QRIAALE 85 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig105.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig105.5.1 >prot_P-wetherbeei_contig105.5.1 ID=prot_P-wetherbeei_contig105.5.1|Name=mRNA_P-wetherbeei_contig105.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp MALFFDQTWFDAKLQQRGLDRAALAAVLGISLADLDDMWKDQREITPREVback to top mRNA from alignment at P-wetherbeei_contig105:5790..6137+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig105.5.1 ID=mRNA_P-wetherbeei_contig105.5.1|Name=mRNA_P-wetherbeei_contig105.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig105:5790..6137+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig105:5790..6137+ >mRNA_P-wetherbeei_contig105.5.1 ID=mRNA_P-wetherbeei_contig105.5.1|Name=mRNA_P-wetherbeei_contig105.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig105:5790..6137+ (Phaeothamnion wetherbeei SAG_119_79)back to top |