mRNA_P-wetherbeei_contig105.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: A0A3C0TUL5_9PROT (PSII_BNR domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TUL5_9PROT) HSP 1 Score: 302 bits (774), Expect = 7.960e-98 Identity = 241/330 (73.03%), Postives = 273/330 (82.73%), Query Frame = 1 Query: 28 AAVTLAAPAGAENRMGLPNPETSVAEDAMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAEESEEFDQPHLNQIFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWGGMTTKEGRILTLGMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSMIRPSRTGYSSVLESVNDEVVLFGDQGIERQPAKFVTDAGAGS 1017 AA+T + AEN MG PE + E A+ ++LAT++LLLG A AGDRLVAVG+WGH+VLSDDKG+TWRQAQKV TR TLTSV+F D+K+GWAVGHDT++LHT DGGE WE+QYS P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+RP+L EE EEF++PHLN IFWGPDR+TQV+IA+EAGNFFRS DAGKTWE + +PY GSFW GM TK GRIL LGMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++IRPSRTG ++V E ND+VVLFGDQGI QPA + GS Sbjct: 28 AALTASPAVQAENIMGQNPPEKAPIEYALPTELATETLLLGVAKAGDRLVAVGNWGHIVLSDDKGLTWRQAQKVPTRTTLTSVYFTDDKHGWAVGHDTIILHTQDGGETWEMQYSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRPVLEEELEEFEEPHLNMIFWGPDRQTQVLIASEAGNFFRSSDAGKTWEILNLPYRGSFWSGMVTKTGRILALGMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGESFTTVIRPSRTGLTNVAEGANDQVVLFGDQGIALQPAHLPKEPPPGS 357
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: A0A352KE15_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KE15_9PROT) HSP 1 Score: 246 bits (627), Expect = 8.320e-76 Identity = 153/223 (68.61%), Postives = 177/223 (79.37%), Query Frame = 1 Query: 43 AAPAGAENRMGLPNPETSVAEDAMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAEESEEFDQPHLNQIFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWGGMTTKEGRILTL 711 AA A ++G P PET+ E A+ S LAT++LLL A AG+RLVAVGHWGHVVLSDD G+ WRQA+ V TRNTLTSV+FAD+KNGWAVGHD +VLHT E+QYS P AETPL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R LL SE+F PHLN IFWGPD+ +QV+I+AEAG FFRS DAGKTWE+++ PY GSFWGG+T + GR+L L Sbjct: 28 AALAQTPKKLGGPTPETAPIEYAIPSKLATRTLLLSVAHAGERLVAVGHWGHVVLSDDGGLNWRQAKSVPTRNTLTSVYFADDKNGWAVGHDAIVLHTXXXXXXXEMQYSDPPAETPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDLLENPSEDFYNPHLNNIFWGPDKSSQVLISAEAGYFFRSNDAGKTWEELQTPYDGSFWGGITLRSGRVLAL 250
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: A0A2E6U217_9HYPH (PSII_BNR domain-containing protein n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E6U217_9HYPH) HSP 1 Score: 172 bits (436), Expect = 1.770e-47 Identity = 187/325 (57.54%), Postives = 227/325 (69.85%), Query Frame = 1 Query: 1 MRAAMMVIGAAVTLAAPAGAENRMGLPNPETSVAEDAMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAEESEEFDQPHLNQIFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWGGMTTKEGRILTLGMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSMIRPSRTGYSSVLESVNDEVVLFGDQGIE 975 + A++ + AV++ A A++ G P P E A+ SD+A+++LLL AG RLVAVG +GHV+LSDDKG +WRQA V TRNTL V F D + G+AVGH +L T DGGENW LQY+ ETPL XXXXXXXXXXXXXXXXXXXXXXXXXXXXX R L+ + ++F HLN +F D K + I AE G ++S D G+ W+ I+ Y GSFWGG+ G +L GMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + RP R +++ + DE+VL GD GI+ Sbjct: 11 LAASLFIFAIAVSIDHEAFADDHGGKPQPY----EYAVASDMASEALLLDVDSAGSRLVAVGEFGHVLLSDDKGTSWRQAASVPTRNTLVGVTFLDNQTGYAVGHAATILKTEDGGENWTLQYNERNGETPLFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRALVEDSYDDF---HLNDVF--ADNKGNLYIPAEFGTVYKSRDRGQNWQAIETGYDGSFWGGLGLDNGDLLVFGMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSFTNQPRPDRLSFATAIGKTGDEIVLLGDPGIK 326
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: X5MMX2_9HYPH (FIG002465: BNR repeat protein n=1 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MMX2_9HYPH) HSP 1 Score: 172 bits (436), Expect = 2.860e-47 Identity = 121/200 (60.50%), Postives = 144/200 (72.00%), Query Frame = 1 Query: 109 AMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAE-----ESEEFDQPHLNQIFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWGGMTTKE 693 A SDLA K+LL+ +A G+R+VAVG +GH+V+SDD+G TWRQA V T+ LT+V+FAD+K G+AVGHD V++ T DGGENW+L+Y P AE PL XXXXXXXXXXXXXXXXXXXXXXXXXXXXX E E++ PHLN +F GPD + IAAE G FRSLD G WE IK PY GSFWGGMT + Sbjct: 48 ATPSDLAAKTLLVAAADLGERIVAVGQFGHIVISDDEGATWRQAASVPTQALLTAVYFADDKVGYAVGHDAVIIKTEDGGENWDLKYDDPEAEMPLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLEYE-PHLNALFEGPDGT--MFIAAETGFVFRSLDNGANWEPIKTPYFGSFWGGMTLND 244
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: A0A3D4F2M7_9HYPH (Uncharacterized protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A3D4F2M7_9HYPH) HSP 1 Score: 160 bits (406), Expect = 3.600e-43 Identity = 171/292 (58.56%), Postives = 208/292 (71.23%), Query Frame = 1 Query: 103 EDAMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAEESEEFDQPHLNQIFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWGGMTTKEGRILTLGMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSMIRPSRTGYSSVLESVNDEVVLFGDQGIER 978 E A SD+ TK+L+L A G RLVAVG +GH++ SDD+G TW QA+ V TRNT+T + F D+K G+AVGHD +L T DGGE+W L+Y E PL XXXXXXXXXXXXXXXXXXXXXXXXXX RPL+ ++F HLN +F D + I AE G ++S D G+T+E I+ PY GSFWGG+ G +L GMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ +RP R +++V + EV+L+GD G+ R Sbjct: 30 EYAKPSDMTTKALILDVAEIGSRLVAVGEFGHIIYSDDRGETWVQARDVPTRNTITDITFTDDKVGFAVGHDATILKTEDGGESWMLKYIERRGENPLFGLDXXXXXXXXXXXXXXXXXXXXXXXXXXTQRPLVEGGYDDF---HLNGLF--SDAAGNMYIPAEFGVVYKSTDGGRTFEGIQTPYEGSFWGGLPLANGDLLIWGMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGNFEAYVRPDRLSFATVSSKSDSEVLLYGDPGVLR 316
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: A0A845Q6C9_9HYPH (PSII_BNR domain-containing protein n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845Q6C9_9HYPH) HSP 1 Score: 156 bits (395), Expect = 3.050e-41 Identity = 113/200 (56.50%), Postives = 133/200 (66.50%), Query Frame = 1 Query: 109 AMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAEESEEFDQPHLNQ----IFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWGGMTTKEG 696 A SDLA +SLL+ +A G+R+VAVG +GHVV+SDD+G TWRQA +V T+ LT V+F D+K G+AVGHD V++ T DGGE WEL+YS P AE PL XXXXXXXXXXXXXXXXXXXXXXXXXXXX +F GP + IAAE G FRS D G WE IK PY GSFWGG+T +G Sbjct: 48 ATPSDLAARSLLVAAADLGERIVAVGQFGHVVISDDRGETWRQASQVPTQALLTGVYFVDDKTGYAVGHDAVIIKTEDGGETWELKYSDPEAEMPLFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRGPSGS--LFIAAETGFIFRSTDNGANWEPIKTPYFGSFWGGITLNDG 245
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: A0A6N6VQ11_9HYPH (PSII_BNR domain-containing protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VQ11_9HYPH) HSP 1 Score: 155 bits (391), Expect = 1.170e-40 Identity = 125/231 (54.11%), Postives = 152/231 (65.80%), Query Frame = 1 Query: 4 RAAMMVIGAAVTLAAPAGAENRMGLPNPETSVAEDAMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAEESEEFDQPHLNQIFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWGGMTTKEG 696 R M A V AAP GA++ + E A S LATK LLL + G+RLVAVG +GHVV SDD G TW QA KV T+ TLTSV+F ++K G+A GHD+ VL T DGG NW L Y A++P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R L+ E + D HLN +F ++ V++AAE G+ FRS D GKT+++IK Y GSFWGG+ +G Sbjct: 13 RPVMAAALALVLAAAPLGAQSAHA-EDASADAVEYATPSKLATKDLLLAATKVGNRLVAVGEFGHVVYSDDMGATWVQAAKVPTQVTLTSVYFVNDKVGFAGGHDSTVLRTDDGGVNWTLAYHDVKAQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRKLV--EGSDLDS-HLNMVFG--EKSGTVLVAAEFGSVFRSTDKGKTFQEIKTGYEGSFWGGLALSDG 237
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: B5JS97_9GAMM (Glycosyl hydrolase, BNR repeat n=1 Tax=gamma proteobacterium HTCC5015 TaxID=391615 RepID=B5JS97_9GAMM) HSP 1 Score: 150 bits (379), Expect = 4.960e-39 Identity = 88/210 (41.90%), Postives = 117/210 (55.71%), Query Frame = 1 Query: 103 EDAMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAEESE-EFDQP---HLNQIFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWGGMTTKEGRILTLGMR 720 E A+++ LA KSLLL AG+RL+AVG +G++VLSDD+G TWRQAQ V R TLT+V F DEK GWAVGHD V+L T DGGENW QY +P E PL LA+ +E + P HL+Q+ + + +AEAG +RSLD G+TW++I PY GSF+G + +L G++ Sbjct: 35 EHAVKAPLAEKSLLLDVERAGERLIAVGGYGNIVLSDDEGSTWRQAQSVPARVTLTAVDFVDEKRGWAVGHDAVILKTIDGGENWTRQYFAPEEERPLLEVQFRENGRIGYALGAYSFRLVSNDGGKSWVSKDLADNAETDLGMPIEYHLHQVTKASNGVWYM--SAEAGMAYRSLDKGETWDRIPPPYDGSFFGALPLLGESVLMFGLQ 242
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: A0A7V3H622_9BACT (Uncharacterized protein n=1 Tax=candidate division NC10 bacterium TaxID=2072417 RepID=A0A7V3H622_9BACT) HSP 1 Score: 149 bits (375), Expect = 1.820e-38 Identity = 118/223 (52.91%), Postives = 142/223 (63.68%), Query Frame = 1 Query: 25 GAAVTLAAPAGAENRMGLPNPETSVAE------DAMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAEESEEFDQPHLNQIFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWG 675 GAA+ LAA A GLP P S A ++ LA +SLLLG+A AG RLVAVG GH++LSDD G +WRQA+ V T TLT+V F D + GWAVGHD V+LHT DGGE W+ QY P E PL XXXXXXXXXXXXXXXXXXXXXXXXXX R + E+ HLN + PD + + IA EAG+ +RS D G +W + PY GS++G Sbjct: 6 GAALLLAAVLVA----GLPRPVASPASVPPDDRPVEKARLAARSLLLGAARAGSRLVAVGERGHILLSDDDGKSWRQAE-VPTHATLTAVHFPDARRGWAVGHDAVILHTEDGGERWQRQYHDPAREAPLLDVWXXXXXXXXXXXXXXXXXXXXXXXXXXRKRSIAEEDF------HLNALAAAPDGR--LFIAGEAGHLYRSDDGGWSWRDLPSPYAGSYFG 215
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Match: A0A2D4VJS5_9HYPH (Uncharacterized protein n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VJS5_9HYPH) HSP 1 Score: 148 bits (373), Expect = 6.190e-38 Identity = 181/326 (55.52%), Postives = 218/326 (66.87%), Query Frame = 1 Query: 7 AAMMVIGAAVTLAAPAGAENRMGLPNPETSVAEDAMQSDLATKSLLLGSAWAGDRLVAVGHWGHVVLSDDKGVTWRQAQKVATRNTLTSVFFADEKNGWAVGHDTVVLHTSDGGENWELQYSSPVAETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPLLAEESEEFDQPHLNQIFWGPDRKTQVMIAAEAGNFFRSLDAGKTWEQIKIPYIGSFWGGMTTKEGRILTLGMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSMIRPSRTGYSSVLESVNDEVVLFGDQGIERQP 984 AA++ AA A A+ + G N E E A QS LA K LLL +A AGDR+VAVG +G+VV SDD+G W QA+ V T+ TLT V F +K G+AVGHD +VL T D GE WE + P +ETP XXXXXXXXXXXXXXXXXXXXXXXX R L +++ HLN F + + IAAE G +RS D G T+++I+ PY GSFWGG+ +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK + R R GYS+V++ + +VV+FG+ G + P Sbjct: 22 AALVAFTPLTAKAADAAAQGQNGGQNDEI---EYATQSRLAAKELLLAAANAGDRIVAVGEFGNVVYSDDRGQNWTQAKTVPTQATLTDVTFITDKLGYAVGHDAIVLRTRDAGETWERAFYDPESETPFMTVLFEXXXXXXXXXXXXXXXXXXXXXXXXNERTLSEGLLDDY---HLNGAF--ETKSGAIFIAAEFGVVYRSTDDGATFDRIQTPYEGSFWGGLALDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEVTRSDRLGYSAVVKGADGKVVVFGEPGAKVMP 339 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig105.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig105.3.1 >prot_P-wetherbeei_contig105.3.1 ID=prot_P-wetherbeei_contig105.3.1|Name=mRNA_P-wetherbeei_contig105.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=340bp MRAAMMVIGAAVTLAAPAGAENRMGLPNPETSVAEDAMQSDLATKSLLLGback to top mRNA from alignment at P-wetherbeei_contig105:3731..4750+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig105.3.1 ID=mRNA_P-wetherbeei_contig105.3.1|Name=mRNA_P-wetherbeei_contig105.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1020bp|location=Sequence derived from alignment at P-wetherbeei_contig105:3731..4750+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig105:3731..4750+ >mRNA_P-wetherbeei_contig105.3.1 ID=mRNA_P-wetherbeei_contig105.3.1|Name=mRNA_P-wetherbeei_contig105.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1020bp|location=Sequence derived from alignment at P-wetherbeei_contig105:3731..4750+ (Phaeothamnion wetherbeei SAG_119_79)back to top |