mRNA_P-wetherbeei_contig10455.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10455.2.1
Unique NamemRNA_P-wetherbeei_contig10455.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A352KFG0_9PROT (Nudix hydrolase domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KFG0_9PROT)

HSP 1 Score: 210 bits (535), Expect = 1.760e-67
Identity = 97/144 (67.36%), Postives = 115/144 (79.86%), Query Frame = 1
Query:    1 MKDRDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDASWGLR 432
            M +RDYP RPW GVGV+VW GD V+LVRR + PRKGQWSIPGGMQE+GETA+ AGIREV EETG+ IAIDGL+DV+DLI+PD AGR++THYTLID++GH + E   P PGDD DA  WV    L +Y LWP+T+RVID S  LR
Sbjct:    1 MGERDYPARPWTGVGVIVWRGDEVVLVRRGKEPRKGQWSIPGGMQELGETARAAGIREVMEETGLAIAIDGLIDVIDLIVPDDAGRIRTHYTLIDYYGHCLEEGVEPRPGDDVDACCWVSHVNLKEYGLWPQTQRVIDESRILR 144          
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A353LQ32_9PROT (Phosphohydrolase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LQ32_9PROT)

HSP 1 Score: 183 bits (465), Expect = 1.020e-56
Identity = 87/143 (60.84%), Postives = 107/143 (74.83%), Query Frame = 1
Query:   10 RDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDASWGLRNV 438
            RD+P RPWVGVGVV++  D VLLVRRA+ PR G WSIPGGMQE+GETA QAGIREV EETGI +AIDGL+D++D+I+P+  GR++THYTLID+H H +  E  P   DD   A WV +D L  Y+LW ET RVI+ S   R +
Sbjct:    9 RDFPTRPWVGVGVVIFKDDKVLLVRRAKPPRAGSWSIPGGMQELGETAAQAGIREVCEETGITVAIDGLIDIIDVIVPEDDGRIRTHYTLIDYHAHWLAGE--PQAADDVSDARWVPLDKLADYRLWSETLRVINESATARGL 149          
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A6A7KMU7_9PROT (NUDIX domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KMU7_9PROT)

HSP 1 Score: 166 bits (419), Expect = 4.680e-50
Identity = 79/137 (57.66%), Postives = 99/137 (72.26%), Query Frame = 1
Query:   10 RDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDAS 420
            R+YP+RP+VGVGVVVW GD VLL+ R + PR G WS+PGG QE+GET ++   RE+ EET +EI I GL+DVVD++  D  GRVQ HYTL+DF    V  EA    G DA AA WVR++ +D+Y+LW ETRRVI  S
Sbjct:    3 REYPDRPFVGVGVVVWRGDEVLLIERGKGPRTGGWSLPGGKQELGETVRETAHREIREETAVEIEITGLLDVVDMVRKDGEGRVQFHYTLVDFTAEWVSGEAVA--GTDAAAARWVRLEDIDQYRLWDETRRVIRLS 137          
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A1Y5RZ43_9PROT (Phosphatase NudJ n=2 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5RZ43_9PROT)

HSP 1 Score: 161 bits (408), Expect = 2.830e-48
Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = 1
Query:   10 RDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDASWGLR 432
            R+YP RP +GVGVV+W GD +LLVRR + PR GQWS+PGG+QE+GET  +A +REV EETG+E  I GLVD+VD I+PDA GRV+ HYTL+DF    V  EA      DADA  W+R D    Y  W ET R+ID S  +R
Sbjct:    5 REYPARPMIGVGVVLWQGDRLLLVRRGKPPRAGQWSLPGGLQELGETTVEAALREVREETGVECRILGLVDIVDAIVPDANGRVRYHYTLLDFVAEWVSGEARAD--SDADAVAWIRRDEAAHYLEWSETLRIIDQSVTMR 143          
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A7X3YAV1_9PROT (NUDIX hydrolase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7X3YAV1_9PROT)

HSP 1 Score: 155 bits (392), Expect = 7.860e-46
Identity = 83/141 (58.87%), Postives = 96/141 (68.09%), Query Frame = 1
Query:   13 DYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDASWGLRN 435
            D  +RP VGVGVVV  GD VLLVRR + PRK QWSIPGG QE GET + A  RE+ EETG+EIA+ GLVDVVD I  DA G   +HYTLIDF    V  EA    GDDA  A W  +D LD Y+LW ETRR+I A+  +R+
Sbjct:    2 DGADRPVVGVGVVVLRGDDVLLVRRGEPPRKDQWSIPGGKQERGETVRDAARREIREETGVEIALIGLVDVVDGIRRDATGATVSHYTLIDFAAEWVSGEAVA--GDDAAEARWTPLDGLDDYRLWSETRRIIAAAAAMRD 140          
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A2S6TBP3_9PROT (Nudix hydrolase domain-containing protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin2 TaxID=2013075 RepID=A0A2S6TBP3_9PROT)

HSP 1 Score: 154 bits (388), Expect = 2.410e-45
Identity = 76/137 (55.47%), Postives = 94/137 (68.61%), Query Frame = 1
Query:   10 RDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDAS 420
            R+YPE P VGVGVVVW  + VLL++R + PR G WS+PGG QE+GET +QAG+REV EETG+ + I GL+DV+D I  D  GRV+  YTL+D+    +  E  P  G DA  A WV  + LD YKLW ET RVID S
Sbjct:    3 REYPEFPMVGVGVVVWKSEMVLLIQRGKPPRAGTWSLPGGRQELGETTQQAGVREVLEETGLCVEIKGLIDVIDSINRDDDGRVRMQYTLVDYWAEWISGE--PVAGTDASDARWVHPNNLDAYKLWNETLRVIDLS 137          
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A4P7YDQ6_9PROT (NUDIX domain-containing protein n=2 Tax=unclassified Azospirillum TaxID=2630922 RepID=A0A4P7YDQ6_9PROT)

HSP 1 Score: 154 bits (389), Expect = 2.780e-45
Identity = 78/144 (54.17%), Postives = 91/144 (63.19%), Query Frame = 1
Query:   10 RDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDASWGLRNVR 441
            R+YP+RPWVGVG VVW GD VLL+RR +APR GQWS+PGG Q VGET  +  +REV EETG+E+   G+V VVD I PDA GRV  HYTL++    S   E  P   DDA  A W   D   +   W ETRRVI  S   R  R
Sbjct:   14 REYPDRPWVGVGAVVWRGDKVLLIRRGKAPRMGQWSLPGGAQSVGETVFETAVREVREETGLEVVPTGIVTVVDAITPDAKGRVHYHYTLVEVAAESA--EGEPLCADDALEACWATADEAGELTEWDETRRVILLSATQRQTR 155          
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A5A9FN57_9PROT (NUDIX hydrolase n=5 Tax=Azospirillum TaxID=191 RepID=A0A5A9FN57_9PROT)

HSP 1 Score: 154 bits (389), Expect = 3.350e-45
Identity = 79/144 (54.86%), Postives = 91/144 (63.19%), Query Frame = 1
Query:   10 RDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDASWGLRNVR 441
            R+YP+RPWVGVGVVVW GD VLL+RR +APR GQWS+PGG Q VGET  +  IREV EETG+E+   G+V VVD I PDA GRV  HYTL++    S   E  P   DDA  A W   D       W ETRR+I  S   R  R
Sbjct:   17 REYPDRPWVGVGVVVWRGDRVLLIRRGKAPRLGQWSLPGGAQSVGETVFETAIREVREETGLEVVPTGIVTVVDAITPDAEGRVHYHYTLVEVAADSA--EGDPICADDALEACWATADEAGDLTEWDETRRIILMSAEQRKAR 158          
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A2H6AXI0_9BACT (Bifunctional NMN adenylyltransferase/Nudix hydrolase n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6AXI0_9BACT)

HSP 1 Score: 152 bits (385), Expect = 7.780e-45
Identity = 79/147 (53.74%), Postives = 95/147 (64.63%), Query Frame = 1
Query:    1 MKDRDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDASWGLRNVR 441
            M +RDYP RP+VGVGVVVW G+ VLL+RR   PR G WS+PGG+QE+GET + A  REV EETG+E+    LVDVVD +  DA G V  HYTL+DF   +   EA P  G DA A  W     LD   LW ETRR++ A+  LR  R
Sbjct:    1 MAERDYPTRPYVGVGVVVWRGERVLLIRRGHPPRAGSWSLPGGIQELGETVRDAARREVREETGLELGELVLVDVVDSLERDAFGEVVRHYTLVDFTAEAAAGEARP--GGDAAAIGWFLPQDLDHLPLWSETRRIVAAARRLREQR 145          
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Match: A0A0F2KY93_9PROT (Phosphohydrolase n=2 Tax=Azospirillum TaxID=191 RepID=A0A0F2KY93_9PROT)

HSP 1 Score: 153 bits (386), Expect = 9.260e-45
Identity = 76/134 (56.72%), Postives = 88/134 (65.67%), Query Frame = 1
Query:   10 RDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGETAKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHSVREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVI 411
            R+YP+RPWVGVG VVW GD VLL+RR +APR GQWS+PGG Q VGET  +  +REV EETG+EI   G+V VVD I PDA GRV  HYTL++    S   E  P   DDA  A W   D   +   W ETRRVI
Sbjct:   11 REYPDRPWVGVGAVVWRGDRVLLIRRGKAPRLGQWSLPGGAQSVGETVFETAVREVREETGLEIVPTGIVTVVDAITPDAEGRVHYHYTLVEVAAESA--EGDPVCADDALEACWATADEAGELTEWDETRRVI 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10455.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A352KFG0_9PROT1.760e-6767.36Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A353LQ32_9PROT1.020e-5660.84Phosphohydrolase n=6 Tax=Alphaproteobacteria bacte... [more]
A0A6A7KMU7_9PROT4.680e-5057.66NUDIX domain-containing protein n=1 Tax=Alphaprote... [more]
A0A1Y5RZ43_9PROT2.830e-4856.74Phosphatase NudJ n=2 Tax=Oceanibacterium hippocamp... [more]
A0A7X3YAV1_9PROT7.860e-4658.87NUDIX hydrolase n=2 Tax=Alphaproteobacteria bacter... [more]
A0A2S6TBP3_9PROT2.410e-4555.47Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A4P7YDQ6_9PROT2.780e-4554.17NUDIX domain-containing protein n=2 Tax=unclassifi... [more]
A0A5A9FN57_9PROT3.350e-4554.86NUDIX hydrolase n=5 Tax=Azospirillum TaxID=191 Rep... [more]
A0A2H6AXI0_9BACT7.780e-4553.74Bifunctional NMN adenylyltransferase/Nudix hydrola... [more]
A0A0F2KY93_9PROT9.260e-4556.72Phosphohydrolase n=2 Tax=Azospirillum TaxID=191 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10455contigP-wetherbeei_contig10455:1493..1942 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1123366.TH3_06755
PFAMsNUDIX
Model size450
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.49e-41
EggNOG OGsCOG1051@1|root,COG1051@2|Bacteria,1N1KH@1224|Proteobacteria,2UDD1@28211|Alphaproteobacteria,2JT81@204441|Rhodospirillales
DescriptionBelongs to the Nudix hydrolase family
Cds size450
COG categoryF
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185870.1384873-CDS-P-wetherbeei_contig10455:1492..19421683185870.1384873-CDS-P-wetherbeei_contig10455:1492..1942Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10455 1493..1942 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10455.2.1prot_P-wetherbeei_contig10455.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10455 1493..1942 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10455.2.1

>prot_P-wetherbeei_contig10455.2.1 ID=prot_P-wetherbeei_contig10455.2.1|Name=mRNA_P-wetherbeei_contig10455.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp
MKDRDYPERPWVGVGVVVWSGDAVLLVRRAQAPRKGQWSIPGGMQEVGET
AKQAGIREVFEETGIEIAIDGLVDVVDLILPDAAGRVQTHYTLIDFHGHS
VREEATPSPGDDADAAHWVRIDALDKYKLWPETRRVIDASWGLRNVRAE*
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mRNA from alignment at P-wetherbeei_contig10455:1493..1942-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10455.2.1 ID=mRNA_P-wetherbeei_contig10455.2.1|Name=mRNA_P-wetherbeei_contig10455.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig10455:1493..1942- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGATCGCGATTATCCTGAGCGGCCATGGGTAGGGGTGGGGGTTGT TGTCTGGTCAGGGGATGCTGTGCTGTTGGTCCGCCGCGCCCAGGCCCCGC GCAAGGGACAATGGAGCATCCCGGGCGGCATGCAGGAAGTGGGCGAAACC GCAAAACAGGCCGGCATCCGCGAAGTGTTCGAGGAAACCGGGATTGAAAT TGCGATTGACGGGCTTGTCGATGTGGTCGACCTGATCCTGCCCGATGCTG CGGGACGGGTGCAGACGCATTACACGCTGATCGATTTTCATGGCCATAGC GTGCGGGAGGAAGCAACGCCCAGCCCGGGCGATGATGCAGACGCCGCCCA TTGGGTAAGGATCGATGCTTTGGATAAATATAAGCTTTGGCCCGAAACCC GGCGCGTGATTGATGCAAGCTGGGGATTGCGGAATGTCCGCGCGGAATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10455:1493..1942-

>mRNA_P-wetherbeei_contig10455.2.1 ID=mRNA_P-wetherbeei_contig10455.2.1|Name=mRNA_P-wetherbeei_contig10455.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig10455:1493..1942- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGATCGCGATTATCCTGAGCGGCCATGGGTAGGGGTGGGGGTTGT
TGTCTGGTCAGGGGATGCTGTGCTGTTGGTCCGCCGCGCCCAGGCCCCGC
GCAAGGGACAATGGAGCATCCCGGGCGGCATGCAGGAAGTGGGCGAAACC
GCAAAACAGGCCGGCATCCGCGAAGTGTTCGAGGAAACCGGGATTGAAAT
TGCGATTGACGGGCTTGTCGATGTGGTCGACCTGATCCTGCCCGATGCTG
CGGGACGGGTGCAGACGCATTACACGCTGATCGATTTTCATGGCCATAGC
GTGCGGGAGGAAGCAACGCCCAGCCCGGGCGATGATGCAGACGCCGCCCA
TTGGGTAAGGATCGATGCTTTGGATAAATATAAGCTTTGGCCCGAAACCC
GGCGCGTGATTGATGCAAGCTGGGGATTGCGGAATGTCCGCGCGGAATAA
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