mRNA_P-wetherbeei_contig10449.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10449.2.1
Unique NamemRNA_P-wetherbeei_contig10449.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A3C0TSU5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TSU5_9PROT)

HSP 1 Score: 398 bits (1023), Expect = 1.590e-138
Identity = 207/258 (80.23%), Postives = 227/258 (87.98%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTL------PKDAI-DDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGWTTQ 753
            M GR+EGKVVLISGGASGIG AHA  FAAEGAKVLIGDIQE MGK+VAD IG+TNSGGQAAF  LDV+SEASW DAV+KAV+LYGKLTTL+NNAG+ ++GG+TTETQASWDKTIAVNQ GVWYGM+ AIPEM KAGGGAIVNISSVYGIIGSP MLSYHASKGAVRLMTKAAALEYAT+GIRINSVHPGII TP+ KT       P +A+   I+SKTPMGR G+P EIA GSLFLCSD+ASF+TGAELVIDGGWT Q
Sbjct:    1 MTGRMEGKVVLISGGASGIGAAHARVFAAEGAKVLIGDIQEAMGKEVADGIGVTNSGGQAAFATLDVTSEASWADAVRKAVSLYGKLTTLINNAGVAILGGLTTETQASWDKTIAVNQQGVWYGMRAAIPEMKKAGGGAIVNISSVYGIIGSPDMLSYHASKGAVRLMTKAAALEYATQGIRINSVHPGIIQTPIIKTTFSSSGAPAEAVLQSIYSKTPMGRLGQPEEIAKGSLFLCSDDASFVTGAELVIDGGWTAQ 258          
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A3C0TTW1_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TTW1_9PROT)

HSP 1 Score: 371 bits (953), Expect = 3.440e-128
Identity = 189/237 (79.75%), Postives = 212/237 (89.45%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLPKDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFI 711
            MAGRLEGKVVLISGGASGIG AHA  FAAEGAKVLIGD+QEK+GK+VAD IG+TNSGGQAAFT L+V+SE SWNDAV+KAV +YGKLTTL+NNAGIG +GGVT E+QASWD+TIAVNQTGVWYGM+  IPEMLKAGGGAIVNISSVYGIIGSP MLSYHASKGAVRLMTKAAALEYA +G+RINSVHPGII TP+ + +P      + +KTPMGRFG+P EIA GSL+LCSDEASF+
Sbjct:    1 MAGRLEGKVVLISGGASGIGAAHARIFAAEGAKVLIGDVQEKLGKEVADGIGVTNSGGQAAFTALNVASEQSWNDAVRKAVEMYGKLTTLINNAGIGSLGGVTDESQASWDRTIAVNQTGVWYGMRAVIPEMLKAGGGAIVNISSVYGIIGSPDMLSYHASKGAVRLMTKAAALEYAGQGVRINSVHPGIIKTPIIQGMPDAFAAGLVAKTPMGRFGQPEEIARGSLYLCSDEASFV 237          
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A496WQE2_9GAMM (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496WQE2_9GAMM)

HSP 1 Score: 296 bits (757), Expect = 3.400e-98
Identity = 150/251 (59.76%), Postives = 189/251 (75.30%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLPKDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGWTTQ 753
            M  RLEGKV +I+GGASGIGE HAH FA EGAKV++ DIQE++G +V  AI     GG A F   DV+SE+ W D VK  V+ YGK+TTLVNNAGI  M GV  ET   +++ +A+ QTGVW GMK  +PE+ K+G GAIVNISS+YGI+G+P M++YH +KGAVRLMTK+A LEYA +G+R+NSVHPGII TPLA++L  D + +I + TP+GR G P++IA  SLFLCSDE+ FIT  E V+DGGW  Q
Sbjct:    1 MGNRLEGKVAIITGGASGIGEGHAHLFAREGAKVVVTDIQEELGANVVSAI--QGEGGDAIFVRQDVTSESDWADVVKATVDKYGKITTLVNNAGIANMLGVEEETLEGFNRVVAICQTGVWLGMKACMPELKKSGNGAIVNISSLYGIMGTPSMVAYHGAKGAVRLMTKSAGLEYAKQGVRVNSVHPGIIKTPLAESLTSDYVAEITAATPLGRMGDPMDIATMSLFLCSDESGFITANEFVVDGGWGAQ 249          
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A1Y5FYI1_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Y5FYI1_9GAMM)

HSP 1 Score: 293 bits (750), Expect = 3.930e-97
Identity = 149/251 (59.36%), Postives = 187/251 (74.50%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLPKDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGWTTQ 753
            M  RLEGKV +I+GGASGIGEAHAH FA+EGAKV++ D+QE++G  V  AI     GG A F   DV+SE+ W D  K+ V+ YG +TTLVNNAG+G   GV  ET   +++ +A+ QTGVW GM+  +P + K+G GAIVNISS++GIIG+P M+SYH +KGAVRLMTK+A LEYA +G+R+NSVHPGII TPLAKT+  + +  I   TPM R GKP++IA  SLFL SDEA FITGAE V+DGGW  Q
Sbjct:    1 MGNRLEGKVAIITGGASGIGEAHAHLFASEGAKVVVTDVQEELGAKVVSAI--QGEGGDAIFIRQDVTSESDWADVAKQTVDKYGAITTLVNNAGVGNFTGVEEETLEGFNRVVAICQTGVWLGMRACMPALKKSGNGAIVNISSLFGIIGTPSMISYHGAKGAVRLMTKSAGLEYAQQGVRVNSVHPGIIETPLAKTMGDEKMAAIVQTTPMARTGKPIDIATMSLFLSSDEAGFITGAEFVVDGGWGAQ 249          
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A3D3T5Y8_9GAMM (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A3D3T5Y8_9GAMM)

HSP 1 Score: 292 bits (748), Expect = 7.910e-97
Identity = 149/251 (59.36%), Postives = 188/251 (74.90%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLPKDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGWTTQ 753
            M  RLEGKV +I+GGASGIGEAHAH +A+EGAKV++ DIQE++G +V  AI     GG A F   DV+SE  W + VK  V+ YG +TTLVNNAG+    GV  ET   +++ +++ QTGVW GMK  +PE+ K+G GAIVNISS+YGIIG+P M++YH +KGAVRLMTK+A LEYA +G+RINSVHPGII TPLA TL  D I +I + TP+G  G+P++IA  SLFLCSDEA FIT +E V+DGGW  Q
Sbjct:    1 MGSRLEGKVAIITGGASGIGEAHAHLYASEGAKVVVTDIQEELGANVVRAI--EGEGGDAIFVRHDVTSEVDWANVVKTTVDQYGAITTLVNNAGVANFSGVEEETLEGFNRVVSICQTGVWLGMKACMPELKKSGNGAIVNISSLYGIIGTPSMVAYHGAKGAVRLMTKSAGLEYAKQGVRINSVHPGIIKTPLADTLTADYIAEITATTPLGCMGEPIDIATMSLFLCSDEAKFITASEFVVDGGWGAQ 249          
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A523FMV1_9PROT (Glucose 1-dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FMV1_9PROT)

HSP 1 Score: 292 bits (747), Expect = 1.120e-96
Identity = 145/249 (58.23%), Postives = 188/249 (75.50%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLPKDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGWT 747
            M GRL+GK+ LI+GGASGIG AH   FAAEGAKV+ GD+Q ++G+ V D      +GG A F  LDV+ EASW +A+  AV +YG LTTLVNNAGI   GG+  ET+  WDK +AVNQT VW GMK A+PE+ K+G  AIVNISS++GIIGSPG +SYHA+KGAVR+M+K+AALEY   G+R+NS+HPG I TP+   L  ++   I +  PMG  G+P+++A+GSL+LCSD+A ++TG ELVIDGGW+
Sbjct:    1 MTGRLDGKIALITGGASGIGAAHVALFAAEGAKVICGDVQHELGQAVVDQA--KANGGDAVFVPLDVTGEASWQNAINMAVTIYGGLTTLVNNAGIYHPGGIEEETREGWDKMVAVNQTAVWLGMKAALPELKKSGNAAIVNISSLFGIIGSPGSISYHATKGAVRIMSKSAALEYVNDGVRVNSIHPGQIETPIIGDLTPESDAAIKAAIPMGEMGQPIDVAHGSLYLCSDDARYVTGIELVIDGGWS 247          
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A352Q701_9GAMM (Uncharacterized protein n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A352Q701_9GAMM)

HSP 1 Score: 291 bits (746), Expect = 1.590e-96
Identity = 148/251 (58.96%), Postives = 190/251 (75.70%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLPKDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGWTTQ 753
            M  RL+ KV +I+GGASGIGEAHAH FA EGAKV++ D+Q+ +G+ V  AIG    GG A + + DV+SE+ W++ VK  ++ YG +TTLVNNAG+  + GV  ET   +++ +A+ QTGVW GMK  +P + K+G GAIVNISS+YGIIG+P M+SYH +KGAVRLMTK+A LEYA +G+RINSVHPGII TPLAKTL  + I+ I   TPMGR G+P++IA  SLFLCSDEA FIT +E V+DGGW  Q
Sbjct:    1 MGERLKDKVAIITGGASGIGEAHAHLFANEGAKVVVTDLQDDLGEKVVAAIG--KEGGDAIYVHQDVTSESDWDNVVKTTIDKYGAITTLVNNAGVANISGVEEETLDGFNRVVAICQTGVWLGMKACMPALKKSGNGAIVNISSLYGIIGTPSMISYHGAKGAVRLMTKSAGLEYARQGVRINSVHPGIIETPLAKTLSAEYIEMITETTPMGRMGEPMDIATMSLFLCSDEAKFITASEFVVDGGWGAQ 249          
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A0N1C202_9SPHN (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase n=1 Tax=Novosphingobium sp. AAP83 TaxID=1523425 RepID=A0A0N1C202_9SPHN)

HSP 1 Score: 278 bits (712), Expect = 2.400e-91
Identity = 151/248 (60.89%), Postives = 183/248 (73.79%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLPKDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGW 744
            M  RL GKV LISGGASG+GEA A  +A EGA V+IGD+QE++G  V + I    +GGQAAFT LDV+  ASW+ AV   V  +GKLT LVNNAGI   GGV TET A WD+ +A+NQTGV+YGMK A PE+LKAG  AIVNISS+YG+IGSP  +SYHASK AVR+M K AALE+A +GIR+N++ PG I TP+   +  +    I +  PMG  G P++IANGSLFL SDEA +ITGAEL IDGGW
Sbjct:    1 MGQRLAGKVALISGGASGLGEAQAILYAQEGACVMIGDLQEELGASVVEKI--IAAGGQAAFTRLDVTDLASWHAAVSLTVATFGKLTNLVNNAGIFHPGGVQTETTAGWDRMVAINQTGVFYGMKAAAPELLKAGNAAIVNISSLYGLIGSPDAISYHASKAAVRVMGKGAALEFAKQGIRVNTIFPGQIRTPILGDITPEQDAAIKASIPMGLVGDPMDIANGSLFLASDEARYITGAELWIDGGW 246          
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A258V3E9_9SPHN (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase n=1 Tax=Novosphingobium sp. 28-62-57 TaxID=1970409 RepID=A0A258V3E9_9SPHN)

HSP 1 Score: 276 bits (706), Expect = 1.950e-90
Identity = 149/248 (60.08%), Postives = 183/248 (73.79%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLPKDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGW 744
            M  RLEGKV LISGGASG+GEA A  +A EGA V+IGD+QE++G+ VA  I     GGQA FT LDV+   SW+ AV  AV  +GKLTTLVNNAGI   GG+ TE+ A WD+ +A+NQTGV+YGMK A PE+LKAG  AIVNISS+YG+IGSP  +SYHASK AVR+M K  ALE+A +GIR+N++ PG I TP+   +  +    I +  PMG  G P++IA+GSLFL SDEA +ITGAEL IDGGW
Sbjct:    1 MTKRLEGKVALISGGASGLGEAQALLYAREGASVVIGDLQEELGQAVAARI--AGEGGQALFTRLDVTDLESWHAAVALAVATFGKLTTLVNNAGIFHPGGIETESPAGWDRMVAINQTGVFYGMKAAAPELLKAGNAAIVNISSLYGLIGSPDAISYHASKAAVRVMGKGGALEFAKRGIRVNTIFPGQIRTPILGDITPEQDAAIKASIPMGVVGDPMDIAHGSLFLASDEARYITGAELWIDGGW 246          
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Match: A0A124JUA2_9SPHN (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase n=1 Tax=Novosphingobium fuchskuhlense TaxID=1117702 RepID=A0A124JUA2_9SPHN)

HSP 1 Score: 268 bits (686), Expect = 2.190e-87
Identity = 145/249 (58.23%), Postives = 181/249 (72.69%), Query Frame = 1
Query:    1 MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADAIGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMGGVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAG-GGAIVNISSVYGIIGSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLPKDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGW 744
            M+GRLEGKV LISGGASG+GEA A  +A EGA+V+IGD+QE +G  V   I     GG+AAFT LDV+  ASW  AV  +V  YGKLTTLVNNAGI   GG+  E+   W K +AVNQTGV+YGMK   PE++KAG G AIVNISS+YG+IGSPG +SYHASK AVR+M K AALE+  +G+R+N++ PG I TP+   +  +    I +  PMG  G P+++A+ SLFL SDEA +ITGAEL +DGGW
Sbjct:    1 MSGRLEGKVALISGGASGLGEAQALLYAREGARVMIGDLQEVLGASVVARI--RGEGGEAAFTRLDVTELASWQAAVALSVATYGKLTTLVNNAGIFHPGGIIDESPEGWAKMVAVNQTGVFYGMKAGAPELVKAGTGSAIVNISSLYGLIGSPGAISYHASKAAVRVMGKGAALEFVKQGVRVNTIFPGQIRTPILGDITPEQDAAIKASIPMGIVGDPMDVAHASLFLASDEARYITGAELWVDGGW 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10449.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TSU5_9PROT1.590e-13880.23Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A3C0TTW1_9PROT3.440e-12879.75Uncharacterized protein (Fragment) n=1 Tax=Alphapr... [more]
A0A496WQE2_9GAMM3.400e-9859.762,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
A0A1Y5FYI1_9GAMM3.930e-9759.36Uncharacterized protein n=3 Tax=Gammaproteobacteri... [more]
A0A3D3T5Y8_9GAMM7.910e-9759.362,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
A0A523FMV1_9PROT1.120e-9658.23Glucose 1-dehydrogenase n=1 Tax=Alphaproteobacteri... [more]
A0A352Q701_9GAMM1.590e-9658.96Uncharacterized protein n=1 Tax=Porticoccaceae bac... [more]
A0A0N1C202_9SPHN2.400e-9160.892,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
A0A258V3E9_9SPHN1.950e-9060.082,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
A0A124JUA2_9SPHN2.190e-8758.232,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10449contigP-wetherbeei_contig10449:1400..2155 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1346791.M529_18725
Preferred namelinX
PFAMsadh_short_C2
Model size756
Max annot lvl204457|Sphingomonadales
KEGG rclassRC01305
KEGG koko:K15238
KEGG ReactionR05243
KEGG Pathwayko00361,ko01100,ko01120,map00361,map01100,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.37e-80
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MUFX@1224|Proteobacteria,2U8AI@28211|Alphaproteobacteria,2KA2X@204457|Sphingomonadales
Description2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase
Cds size756
COG categoryIQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185869.8326457-CDS-P-wetherbeei_contig10449:1399..21551683185869.8326457-CDS-P-wetherbeei_contig10449:1399..2155Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10449 1400..2155 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10449.2.1prot_P-wetherbeei_contig10449.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10449 1400..2155 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10449.2.1

>prot_P-wetherbeei_contig10449.2.1 ID=prot_P-wetherbeei_contig10449.2.1|Name=mRNA_P-wetherbeei_contig10449.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
MAGRLEGKVVLISGGASGIGEAHAHAFAAEGAKVLIGDIQEKMGKDVADA
IGITNSGGQAAFTNLDVSSEASWNDAVKKAVNLYGKLTTLVNNAGIGMMG
GVTTETQASWDKTIAVNQTGVWYGMKTAIPEMLKAGGGAIVNISSVYGII
GSPGMLSYHASKGAVRLMTKAAALEYATKGIRINSVHPGIIATPLAKTLP
KDAIDDIFSKTPMGRFGKPVEIANGSLFLCSDEASFITGAELVIDGGWTT
Q*
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mRNA from alignment at P-wetherbeei_contig10449:1400..2155+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10449.2.1 ID=mRNA_P-wetherbeei_contig10449.2.1|Name=mRNA_P-wetherbeei_contig10449.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig10449:1400..2155+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGGAAGACTGGAAGGAAAAGTCGTATTGATCAGCGGTGGCGCCAG CGGCATAGGCGAGGCGCATGCGCATGCCTTCGCCGCAGAGGGCGCCAAGG TGCTGATCGGTGACATACAGGAAAAAATGGGCAAGGACGTAGCGGACGCG ATTGGCATCACCAATAGCGGCGGCCAGGCGGCCTTTACCAATCTGGATGT ATCCAGCGAGGCAAGCTGGAATGACGCGGTCAAGAAAGCTGTGAACCTGT ATGGCAAGCTCACCACGCTGGTGAACAATGCGGGCATTGGCATGATGGGC GGCGTCACCACGGAAACCCAGGCTAGCTGGGACAAAACCATCGCCGTTAA CCAGACGGGTGTGTGGTACGGCATGAAAACCGCCATTCCGGAAATGCTGA AGGCTGGCGGCGGCGCAATTGTCAATATATCATCCGTCTACGGAATTATT GGCAGCCCGGGCATGTTGTCCTATCACGCCTCCAAGGGCGCGGTGCGGCT GATGACGAAGGCGGCGGCGCTGGAATATGCGACAAAGGGCATCCGCATCA ATTCCGTGCATCCGGGTATCATCGCCACGCCGCTTGCGAAAACCCTGCCG AAAGACGCCATCGACGATATCTTCTCCAAAACGCCGATGGGCCGGTTTGG CAAGCCGGTGGAAATCGCCAATGGTTCGCTGTTCCTGTGTTCGGATGAAG CTTCATTCATAACCGGGGCGGAACTGGTGATTGATGGCGGCTGGACCACG CAATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10449:1400..2155+

>mRNA_P-wetherbeei_contig10449.2.1 ID=mRNA_P-wetherbeei_contig10449.2.1|Name=mRNA_P-wetherbeei_contig10449.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig10449:1400..2155+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGGAAGACTGGAAGGAAAAGTCGTATTGATCAGCGGTGGCGCCAG
CGGCATAGGCGAGGCGCATGCGCATGCCTTCGCCGCAGAGGGCGCCAAGG
TGCTGATCGGTGACATACAGGAAAAAATGGGCAAGGACGTAGCGGACGCG
ATTGGCATCACCAATAGCGGCGGCCAGGCGGCCTTTACCAATCTGGATGT
ATCCAGCGAGGCAAGCTGGAATGACGCGGTCAAGAAAGCTGTGAACCTGT
ATGGCAAGCTCACCACGCTGGTGAACAATGCGGGCATTGGCATGATGGGC
GGCGTCACCACGGAAACCCAGGCTAGCTGGGACAAAACCATCGCCGTTAA
CCAGACGGGTGTGTGGTACGGCATGAAAACCGCCATTCCGGAAATGCTGA
AGGCTGGCGGCGGCGCAATTGTCAATATATCATCCGTCTACGGAATTATT
GGCAGCCCGGGCATGTTGTCCTATCACGCCTCCAAGGGCGCGGTGCGGCT
GATGACGAAGGCGGCGGCGCTGGAATATGCGACAAAGGGCATCCGCATCA
ATTCCGTGCATCCGGGTATCATCGCCACGCCGCTTGCGAAAACCCTGCCG
AAAGACGCCATCGACGATATCTTCTCCAAAACGCCGATGGGCCGGTTTGG
CAAGCCGGTGGAAATCGCCAATGGTTCGCTGTTCCTGTGTTCGGATGAAG
CTTCATTCATAACCGGGGCGGAACTGGTGATTGATGGCGGCTGGACCACG
CAATAA
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