mRNA_P-wetherbeei_contig10349.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10349.1.1
Unique NamemRNA_P-wetherbeei_contig10349.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A836CK93_9STRA (Heat shock protein 40 like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK93_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.740e-80
Identity = 154/265 (58.11%), Postives = 187/265 (70.57%), Query Frame = 1
Query:    4 VARAEQLLAEGKFSQANTLLDAVMAVGAGRALRLRKVQALVGAGKHDEAYAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            V RA QLL +G+ SQA  L++A +            V ALVG G+HDEAY++   L++     P +L ARAKCLY MGNLD+++KHL EAAR DPD+  EY  LIR+ARAMEATKERGN+AFKAG   EAI AWTEA A+DP NKL+N+KL+FNR A A ARLR+H +A  +A  AIA D  Y+KAY RRA SL  LGG E LEA +RDYE ++  L+ A  A  +V+ KLH A  ALKQARRKDYYKIL V+R A E+ IKKAY
Sbjct:  154 VDRATQLLKDGRASQALQLIEAAL-----------HVDALVGLGRHDEAYSLVGGLLRASPGSPHLLFARAKCLYMMGNLDASIKHLAEAARHDPDNK-EYITLIRRARAMEATKERGNKAFKAGQMQEAIAAWTEALAMDPSNKLYNAKLYFNR-ANALARLRQHREAADNAGLAIACDDTYSKAYMRRAASLFALGGVEELEAAIRDYEKVSDMLDAAGRA--DVQDKLHSANVALKQARRKDYYKILGVQRDADEETIKKAY 403          
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A6H5LKM9_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKM9_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 1.730e-68
Identity = 137/271 (50.55%), Postives = 188/271 (69.37%), Query Frame = 1
Query:    4 VARAEQLLAEGKFSQANTLLD-AVMAVGAGRALRLRKVQALVGAGKHDEAYAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQ-----EAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            V RA   LA+GK ++A ++L+  ++     R L+L KV+ L+G GKH+EAYAM++ L++   N   +L+ RA+CLY MGNLDSA+KHLQ     EAARQDPD++ EYR LI++ + ME+TKE GN+AFKA     AI +W EA  +D  N+ FNSKL+ NR A A A+L +H +AV +AS A++ D  Y KA+ RRA SL ++GG ENLEA  RDYE L   +   +  QRE++ K+ + +AA+KQA+RKDYYK+L V R A + EIKKAY
Sbjct:  174 VERAADSLAQGKPARAASILEECLVKAPQSRELKLMKVECLMGMGKHEEAYAMSSALIRNSQNNSKLLITRARCLYLMGNLDSAIKHLQAFLLFEAARQDPDNS-EYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALTVDKTNRSFNSKLYCNR-AAAYAKLSKHKEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEK--QREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAY 440          
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A4D9DHL1_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHL1_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.000e-58
Identity = 118/254 (46.46%), Postives = 170/254 (66.93%), Query Frame = 1
Query:   40 FSQANTLLDAVMAVG-AGRALRLRKVQALVGAGKHDEAYAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            F +AN L+D  +++  A   +RL K++  VG G+++EA+A +  L++   ++  +L  RA CLY +GN ++A+KHLQ+A R DPD+ A Y  L+++ RA++A K+ G+  F  G +  AI AWTEA A+DP  K  N+K+F N RA A A++R+H +AV D   A+ALD  Y KA  R+A+SL  LGG ENLE C+RDYEV A     +E  +RE   K+HQ + ALK+A+RKD Y+IL +   ATEDEI+KAY
Sbjct:  162 FVRANALVDQCLSLASASPQVRLLKLECQVGLGQYEEAFAGSNHLLRLSPSLAPLLYLRAMCLYHLGNFEAALKHLQQAVRSDPDNHA-YVSLLKKVRALDAKKKEGDTCFTQGQYQPAIDAWTEALAVDPSQKAVNAKMF-NNRATAYAKMRKHTEAVADCKRALALDPQYLKALKRKAESLYALGGEENLEQCLRDYEVAARLAPASE--EREYARKMHQVKVALKRAKRKDLYRILGLSTDATEDEIRKAY 411          
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A7S2SJZ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJZ2_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.780e-57
Identity = 115/234 (49.15%), Postives = 156/234 (66.67%), Query Frame = 1
Query:   97 LRLRKVQALVGAGKHDEAYAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            +++ K++AL G GKH+EA+ +TT+LM+ +  VP +L  RA+CLY M ++  A++H+QEA R DPD+TA YR  +++ + MEA KE GN AFK G + EAI  WT    ID  ++ +N+KL+FNR A A ARLRRH   V D + AI LD  Y KAY+RRA+S   LG  E LE  +RDYE  A  L+  E  QR  R KL Q +  +K+A R D YK+L V + +TEDEI+KAY
Sbjct:  194 IQMMKIEALCGIGKHNEAFTLTTSLMRMNSRVPGLLFWRARCLYYMDSVPQAIRHMQEAMRNDPDNTA-YRTELKKWKHMEAEKEAGNAAFKGGRYEEAIAKWTTCLGIDASHRTYNAKLYFNR-ATAQARLRRHQQTVDDCTKAIELDSGYLKAYNRRAESYRILGEKEGLEQALRDYEK-AAELDD-EANQRSYRQKLQQVKVEIKRAGRLDLYKLLGVSKDSTEDEIRKAY 423          
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A7S2B4H4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4H4_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.590e-56
Identity = 126/271 (46.49%), Postives = 174/271 (64.21%), Query Frame = 1
Query:    4 VARAEQLLAEGKFSQANTLLDAVMAVGAGRA-LRLRKVQALVGAGKHDEAYAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAEN-----LEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            +A A Q LAE K++Q    ++ V     G A +++ KV++L G G++ EAY++TT+LM+ +  +  +L  RAKCLY M  +  A+KHLQEA R DPD+   YR  I++ RA+EA KE GN AFKAG+  EAI  WT    +DP N+ FN+KL+ NR   A ++LRRH +AV D + AI LD  Y KAY+RRA+SL  L G  N     L+  +RDYE  A  L++ E  QR+ + K+   Q  +K+  RKD+YKIL V + AT+DEIKKAY
Sbjct:  135 LALARQCLAEEKYTQTWRQIEIVEKSLPGIADIQMIKVESLCGLGRYQEAYSLTTSLMRTNSRLQGLLFWRAKCLYYMNQMPQAIKHLQEAMRNDPDNKT-YRTEIKKWRALEAQKEAGNAAFKAGNLQEAITEWTACLEVDPSNRPFNAKLYANR-GTAYSKLRRHQEAVDDCTRAIDLDPMYLKAYNRRAESLRCLDGEPNEMKVHLQGALRDYEK-AMELDSEEN-QRDYKTKMRTVQTEIKRVGRKDFYKILGVSKDATDDEIKKAY 401          
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A662YAU2_9STRA (J domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAU2_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.440e-55
Identity = 118/265 (44.53%), Postives = 172/265 (64.91%), Query Frame = 1
Query:    4 VARAEQLLAEGKFSQANTLLDAVMAVGAGRALRLRKVQALVGAGKHDEAYAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            V +A+  LA  +FS  + L  A +  G+  A++L + +AL+G  ++DEA+A+ T LM+ D + P +L  RA+CLY  G   SA+KHLQ+A R DPD++   ++ I++ RA+E +KE  N AFK G   +A+  +TE   IDP+NK FNSK+  NR A A +RL RH +A++D   AI  DH YAKAY R+A  L  LGG ENLE  +R Y+  +  +   + AQR+++  + Q +  +K+A+RKD+YKIL V + ATE EIKKAY
Sbjct:   85 VRKAKAQLALVRFSLLSLLHAAQVCTGSS-AIKLLRGEALIGCERYDEAFAVLTQLMRTDSSSPELLFLRARCLYYQGEFPSAIKHLQQALRSDPDNSKCMKE-IKRIRALENSKEEANDAFKTGKMADAVEKYTECLKIDPQNKAFNSKIHCNR-ANALSRLGRHDEAIKDCDKAIYYDHGYAKAYLRKAACLKALGGLENLEQALRVYDQASKLV--GDDAQRDIQNSIRQTKLEVKKAKRKDFYKILAVSQTATEAEIKKAY 344          
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A6G0XB60_9STRA (J domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XB60_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.050e-51
Identity = 109/266 (40.98%), Postives = 167/266 (62.78%), Query Frame = 1
Query:    4 VARAEQLLAEGKFSQANTLLDAVMAVGA-GRALRLRKVQALVGAGKHDEAYAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            + R    +  GKF +A+   D+ + +      L+  + +AL+G  ++DEA+A+ T LM+ D + P VL  RA+CLY  G   SA++HLQEA R DPD+  ++   I++ RA++  KE  N  FKAG + +A+ A+TE  +IDP NK +N+KL  NR A A A+L ++ +A+RD   AI  D +Y KAY R+AQ L ++GG +NLE  +R+YE  +  +   E  QR+    + + +  LK+A+RKDYYKIL + + AT+ +IKKAY
Sbjct:  129 IKRGRDHVKAGKFREASFCFDSALQICTHSNDLKKWRAEALIGCERYDEAFAVLTQLMRSDSSSPDVLFLRAQCLYFQGEFTSAIRHLQEALRADPDN-GKFVKEIKRIRALDTQKEAANDHFKAGRFQDAVEAYTECLSIDPSNKSYNAKLHCNR-AAALAKLNKNEEAIRDCDKAIYYDSSYVKAYLRKAQCLKDIGGKDNLEQALREYETASKLV--GEDQQRQYAQYIRETKLLLKKAKRKDYYKILEIPQTATDADIKKAY 390          
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A7S2B237_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B237_9STRA)

HSP 1 Score: 184 bits (466), Expect = 7.060e-51
Identity = 107/230 (46.52%), Postives = 153/230 (66.52%), Query Frame = 1
Query:  109 KVQALVGAGKHDEAYAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            K+QAL G G++ EAY ++T+LM+ +  VP ++  RAKCLY M  +DSA+KH+QEA R DPD++ EYR  I++ R +E  K+ GN  FK G + +AI  W++   +DP ++ FN+KL  NR A A ++LRRH + V D + A+ LD  Y KAY RRA+SL  L G ENL+    DYE  A  L+  E +Q   + KL   QA +K+A RKD+YKI+ +++ ATE+EI+K Y
Sbjct:  217 KIQALCGIGRYQEAYTVSTSLMRVNSRVPGLIFWRAKCLYYMDQMDSAIKHMQEAMRMDPDNS-EYRVEIQKWRGLEEQKQIGNTKFKNGDFLKAIECWSKCLEVDPTHRSFNAKLLLNR-ATAYSKLRRHEETVADCTRALELDDKYIKAYSRRAESLRVLDGKENLQRAFNDYEK-AMELDN-EDSQGSYKQKLRAVQAEIKRAGRKDFYKIMGLQKDATEEEIRKKY 442          
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A7S1C252_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C252_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.320e-50
Identity = 120/266 (45.11%), Postives = 165/266 (62.03%), Query Frame = 1
Query:   10 RAEQLLAEGKFSQANTLLDAVMAVGAGRA-LRLRKVQALVGAGKHDEAYAMTTTLMKQDGNVPA--VLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            RA + LAEGK  +A  L  A        A L+L +VQ ++ +G+  +AYA+TT LM+      +  +L  RA+ LY +  +D A+KHLQ+A R DPD+TA  +D IR+ R +E  K+ GN+AF  G W +AI A+TE   +DP +K +N+K+  NR A A  +LR++  AV D  A +ALD  Y KAY R+AQ L  +GGA+NLE  +R YE     L   + A  EV   L   +AALKQA+RKDYYKIL V R A +D++KKAY
Sbjct:  196 RAAEALAEGKQGRALALAQAAADDAPAFAPLQLIRVQCILESGRAQDAYALTTDLMRDPAVAASSKLLHLRARALYYLDKVDMAIKHLQQALRNDPDNTACAKD-IRKFRMLEKKKQAGNEAFGRGRWQQAIDAYTECLGVDPHHKSYNAKVLCNR-AAARMKLRQYDAAVADCDATLALDDTYVKAYMRKAQCLSAVGGADNLEEAMRAYESAKRLLPRGDTA--EVDRLLRDTKAALKQAKRKDYYKILGVARDANDDQLKKAY 457          
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Match: A0A024TD26_9STRA (J domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TD26_9STRA)

HSP 1 Score: 177 bits (450), Expect = 8.590e-49
Identity = 108/267 (40.45%), Postives = 166/267 (62.17%), Query Frame = 1
Query:    4 VARAEQLLAEGKFSQANTLLDAVMAV--GAGRALRLRKVQALVGAGKHDEAYAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTAEYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNSKLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGGAENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKILCVERGATEDEIKKAY 798
            + R  + +   KF +A    D+V+     +    +LR  +AL+G  ++DEA+A+ T LM+ + + P +L  RA+CLY  G   SA++HLQEA R DPD+ A +   I++ RA++  KE  N AFK G + EA+ A+T   +IDP NK +N+KL  NR A A A+L ++ +A+RD   AI  D +Y KAY R+AQ L +LGG +NLE  +R+YE  +  +   E  QR+    + + +  +K+A+RKDYYKIL + + A++ +IKKAY
Sbjct:  129 IKRGREHIKASKFREAVYCFDSVLTTCTNSNEVKKLR-AEALIGCERYDEAFAVLTQLMRSESSSPDILYLRAQCLYFQGEFTSAIRHLQEALRADPDN-ARFVKEIKRIRALDTQKEAANDAFKGGRYQEAVEAYTACLSIDPANKSYNAKLHCNR-AAALAKLDKNDEAIRDCDKAIYYDSSYVKAYLRKAQCLKDLGGKDNLEQALREYETASKLV--GEDQQRQYAQYIRETKLLIKKAKRKDYYKILDIGQHASDADIKKAY 390          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10349.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CK93_9STRA1.740e-8058.11Heat shock protein 40 like protein n=1 Tax=Tribone... [more]
A0A6H5LKM9_9PHAE1.730e-6850.55J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A4D9DHL1_9STRA1.000e-5846.46J domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A7S2SJZ2_9STRA3.780e-5749.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2B4H4_9STRA2.590e-5646.49Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A662YAU2_9STRA1.440e-5544.53J domain-containing protein (Fragment) n=1 Tax=Not... [more]
A0A6G0XB60_9STRA3.050e-5140.98J domain-containing protein n=2 Tax=Aphanomyces Ta... [more]
A0A7S2B237_9STRA7.060e-5146.52Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1C252_9STRA2.320e-5045.11Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A024TD26_9STRA8.590e-4940.45J domain-containing protein n=5 Tax=Aphanomyces Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10349contigP-wetherbeei_contig10349:246..2363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FNP6
PFAMsCastor_Poll_mid,Cupin_8,DnaJ,HSF_DNA-bind,SWIB,TPR_1,TPR_16,TPR_19,TPR_2,TPR_8
Model size798
Max annot lvl2759|Eukaryota
KEGG koko:K09527
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.52e-73
EggNOG OGsCOG0484@1|root,KOG0550@2759|Eukaryota
Descriptionchaperone cofactor-dependent protein refolding
Cds size798
COG categoryO
BRITEko00000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185864.9013712-CDS-P-wetherbeei_contig10349:245..4251683185864.9013712-CDS-P-wetherbeei_contig10349:245..425Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10349 246..425 +
1683185864.912647-CDS-P-wetherbeei_contig10349:799..9821683185864.912647-CDS-P-wetherbeei_contig10349:799..982Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10349 800..982 +
1683185864.9218788-CDS-P-wetherbeei_contig10349:1273..13771683185864.9218788-CDS-P-wetherbeei_contig10349:1273..1377Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10349 1274..1377 +
1683185864.9306777-CDS-P-wetherbeei_contig10349:1649..19101683185864.9306777-CDS-P-wetherbeei_contig10349:1649..1910Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10349 1650..1910 +
1683185864.9426646-CDS-P-wetherbeei_contig10349:2293..23631683185864.9426646-CDS-P-wetherbeei_contig10349:2293..2363Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10349 2294..2363 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10349.1.1prot_P-wetherbeei_contig10349.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10349 246..2363 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10349.1.1

>prot_P-wetherbeei_contig10349.1.1 ID=prot_P-wetherbeei_contig10349.1.1|Name=mRNA_P-wetherbeei_contig10349.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
QVARAEQLLAEGKFSQANTLLDAVMAVGAGRALRLRKVQALVGAGKHDEA
YAMTTTLMKQDGNVPAVLLARAKCLYAMGNLDSAVKHLQEAARQDPDSTA
EYRDLIRQARAMEATKERGNQAFKAGSWHEAIVAWTEAAAIDPENKLFNS
KLFFNRRAGANARLRRHADAVRDASAAIALDHAYAKAYHRRAQSLLELGG
AENLEACVRDYEVLAGGLETAEGAQREVRAKLHQAQAALKQARRKDYYKI
LCVERGATEDEIKKAY
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mRNA from alignment at P-wetherbeei_contig10349:246..2363+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10349.1.1 ID=mRNA_P-wetherbeei_contig10349.1.1|Name=mRNA_P-wetherbeei_contig10349.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2118bp|location=Sequence derived from alignment at P-wetherbeei_contig10349:246..2363+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGGCACGGGCAGAGCAGCTGCTAGCGGAGGGCAAGTTCTCGCAGGC CAACACTTTGCTAGACGCCGTCATGGCGGTGGGCGCCGGCCGCGCGCTGC GGCTGCGGAAGGTGCAGGCGCTCGTCGGCGCCGGCAAGCACGACGAGGCT TACGCCATGACTACCACCCTCATGAAGCAGGTGCTGCCGCATTTTGCGCT TTCGTTGGTTTTGAGTGAACGCCCTCATGCTCTTCTTGTCGACTGCTTTT CGAGACGGTTGGCGTTTCCGTTGCCTTTCAATGGGCCTCTTGGGACCTGA ATTTGCTGCTCAGGCAGTCTTTCAGAAACGCTGGTTTGAACCGTTTGTGA CATCACGAACTCCGGTCAAAAGCCGTGCTGAAGCCTTGCCTAACCCATAT GTTCCGGTTCGTGTGGTGACCGCCGCCCTGCCTCCTTCCCGCAAACTTAG CCTTATATCTAACTGTCGCCAACGGAACGGATGAAATGAACGAACGAACG GCCGAACCAAATCGACAACCTTTGGTGGTGGCGGCGGCGTCCTTTGGCTT GCAGGACGGCAACGTGCCAGCGGTGCTGCTGGCGCGGGCCAAATGCCTGT ACGCCATGGGCAACCTGGACAGCGCCGTCAAGCACCTTCAGGAGGCTGCG CGGCAGGACCCCGACAGCACCGCCGAGTACCGCGACCTCATCCGTCAGGC GCGCGCCATGGAGGCCACCAAGGAGCGCGGCAACCAGGTAGGCATGTCGA CACCAGAAGGCCCAGTATATTGTTGACTTTAAACTAATGATCCTACAAAA ACATCTGAACATCTTTGGTGGGCAGCTTTGGGTAAATGCTGGTCGCCAGG AAGCGGTTCAATTTGGCCTGGTTGCTTTGGGTGGCGTATTAATGCTACGG GTTGCGGCATGTGCCACGGTTTATGGCATTGTTTTGGGGTTGCCGGCTGG TGCGAGCGGTTCGTACTTGCCGCAAAAGCATAAATTCATTTCCAGCTTTT CGGCATGTCGGCATTTCCCCCATTGCAGGCGTTCAAAGCCGGGTCGTGGC ACGAGGCGATAGTTGCGTGGACGGAGGCGGCGGCGATCGACCCCGAGAAC AAGCTCTTCAACTCGAAGCTCTTCTTCAACCGGTAAGCTTGTGCGCGGGG TTCAAAAGCGGAGGCCGATTGCCTTGTTGTAGCAGAGAAAAGTTCCTTTG ATGTCTGTATTCACAAGGTGGCGCCCTAGAGATGGTTCAGTGTGGCATGT TCTAATCCTCGCTCTACGTAACTCTTCTGCTGTGGCTTATCCCTTCCCGC ATCGTCGCCGCTTGCGATCTCAATGCTTGGTTTACCGGCCTGCAACTACC GGCGAACCCGCTGCACTTGATGCTGCAACGACCGATGCTGCAATCCCCCG CAAGCAGGGCGGGCGCCAACGCGAGGCTGCGGCGGCACGCCGACGCGGTG CGGGACGCGTCGGCGGCCATCGCGCTCGACCACGCATATGCCAAGGCATA CCACCGGCGGGCGCAGAGCCTGCTGGAGCTGGGGGGTGCCGAGAACCTCG AGGCGTGCGTGCGGGACTACGAGGTGTTGGCGGGCGGGCTGGAGACGGCG GAAGGCGCGCAGCGGGAGGTGCGGGCGAAGCTGCACCAGGCACAGGCTGC ACTCAAGCAGGCCAGGTGAGAAGGGGAGAGAGGGATTTCCGGGAGTTGGG GAAGGAGAGGAGAGTTAGAGAGGGAAGACGGAGAGAGGAGACGAGAGAGG TGATGCGGAAAGAACAGGAACGGCGAGCGTGCTGTGTGAGGCGGAGGTGG CTAGGGAAAGCACGAAAATTGCGTCGGACTGTGCTGCCTGGGATTCAGGC TGTGGAGCAAGGTTTTGGTGCTTTTCGTTATTGCAAACCGATTCGCGCTC CATTGCTGTTGCGACCATGAAGTAGGACGTCTTTGAGTGACGTTTTTTGC CGAATCGCTATACGCCTTTTTCTTCCTGCTGCCTTCCTGCTGTTGGCGGC GGTGGCGAATCGACGTCCGGCACCGGGCCCTTTGTCTTTTCTCTTTAGGC GGAAGGACTACTACAAGATCCTGTGCGTGGAGCGGGGAGCGACGGAGGAT GAGATCAAGAAGGCGTAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10349:246..2363+

>mRNA_P-wetherbeei_contig10349.1.1 ID=mRNA_P-wetherbeei_contig10349.1.1|Name=mRNA_P-wetherbeei_contig10349.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig10349:246..2363+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGGCACGGGCAGAGCAGCTGCTAGCGGAGGGCAAGTTCTCGCAGGC
CAACACTTTGCTAGACGCCGTCATGGCGGTGGGCGCCGGCCGCGCGCTGC
GGCTGCGGAAGGTGCAGGCGCTCGTCGGCGCCGGCAAGCACGACGAGGCT
TACGCCATGACTACCACCCTCATGAAGCAGGACGGCAACGTGCCAGCGGT
GCTGCTGGCGCGGGCCAAATGCCTGTACGCCATGGGCAACCTGGACAGCG
CCGTCAAGCACCTTCAGGAGGCTGCGCGGCAGGACCCCGACAGCACCGCC
GAGTACCGCGACCTCATCCGTCAGGCGCGCGCCATGGAGGCCACCAAGGA
GCGCGGCAACCAGGCGTTCAAAGCCGGGTCGTGGCACGAGGCGATAGTTG
CGTGGACGGAGGCGGCGGCGATCGACCCCGAGAACAAGCTCTTCAACTCG
AAGCTCTTCTTCAACCGCAGGGCGGGCGCCAACGCGAGGCTGCGGCGGCA
CGCCGACGCGGTGCGGGACGCGTCGGCGGCCATCGCGCTCGACCACGCAT
ATGCCAAGGCATACCACCGGCGGGCGCAGAGCCTGCTGGAGCTGGGGGGT
GCCGAGAACCTCGAGGCGTGCGTGCGGGACTACGAGGTGTTGGCGGGCGG
GCTGGAGACGGCGGAAGGCGCGCAGCGGGAGGTGCGGGCGAAGCTGCACC
AGGCACAGGCTGCACTCAAGCAGGCCAGGCGGAAGGACTACTACAAGATC
CTGTGCGTGGAGCGGGGAGCGACGGAGGATGAGATCAAGAAGGCGTAT
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