mRNA_P-wetherbeei_contig10332.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: A0A3C0TTM2_9PROT (UPF0260 protein DCO82_04430 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TTM2_9PROT) HSP 1 Score: 249 bits (637), Expect = 3.910e-83 Identity = 109/148 (73.65%), Postives = 126/148 (85.14%), Query Frame = 1 Query: 4 VMSTEPFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRCVNETGIEIDDLPGHIVRWP 447 +M+ + FW+ KRL +M+ +EWEALCDGC KCCLVKLEDED G++HYT+VACALLDAG CRC DY NRQKRVSDCV LTPENI RVK+WMPS+CAYRLLA+G+PLPQWH+L CGD AVH G SV GRCV+ETGI IDDLP +IV WP Sbjct: 1 MMAQDDFWKRKRLSQMTAQEWEALCDGCAKCCLVKLEDEDDGRVHYTNVACALLDAGICRCSDYENRQKRVSDCVILTPENIHRVKEWMPSTCAYRLLAEGRPLPQWHHLVCGDRDAVHHTGISVQGRCVSETGIAIDDLPDYIVGWP 148
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: A0A352KF98_9PROT (UPF0260 protein DCO73_13965 n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KF98_9PROT) HSP 1 Score: 209 bits (533), Expect = 3.560e-67 Identity = 92/140 (65.71%), Postives = 106/140 (75.71%), Query Frame = 1 Query: 19 PFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRCVNETGIEIDDLPGHIV 438 PFW +K L +S +EWEALCDGCGKCCLVKLEDED G IHYTDV CALLD CRC DY+NR +R+ DCV LTPENI VK WMP SCAYRL+A+GKPLP WH+L CGD VHR GKSV+G E+ + +LP HI+ Sbjct: 13 PFWESKSLDALSRDEWEALCDGCGKCCLVKLEDEDDGTIHYTDVGCALLDIAACRCSDYTNRAERMPDCVILTPENIGEVKHWMPQSCAYRLIAEGKPLPAWHHLVCGDRQMVHRRGKSVIGIAAIESEVPEAELPAHII 152
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: A0A2Z4UG55_9HYPH (UPF0260 protein RHODOSMS8_00490 n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2Z4UG55_9HYPH) HSP 1 Score: 197 bits (500), Expect = 3.520e-62 Identity = 86/150 (57.33%), Postives = 112/150 (74.67%), Query Frame = 1 Query: 1 EVMSTEPFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRCVNETGIEIDDLPGHIVRWPR 450 E ++ +PFW+ K++ EMS EEWE+LCDGC KCCL+KLEDEDTG++ YTD++C+LLD C+C DY NR +V DCVTLTPEN+ ++ WMPS+CAYRLLA+G+ LP WH L G+ +VH G SV GR V+E ++ DL G IV WP Sbjct: 3 EKLTEQPFWQTKKMTEMSREEWESLCDGCAKCCLIKLEDEDTGELEYTDISCSLLDCETCQCGDYPNRSVKVPDCVTLTPENVQQLN-WMPSTCAYRLLANGEDLPWWHPLVSGEQESVHLAGMSVRGRTVSEDDVDPTDLEGRIVTWPE 151
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: Y898_PARL1 (UPF0260 protein Plav_0898 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=Y898_PARL1) HSP 1 Score: 195 bits (495), Expect = 1.970e-61 Identity = 89/144 (61.81%), Postives = 107/144 (74.31%), Query Frame = 1 Query: 16 EPFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRCVNETGIEIDDLPGHIVRWP 447 EPFWR KRL +M+ EWE+LCDGC KCCLVKLEDEDTG++ YTD+AC LLDA CRC DY+NR +RV DCVTLTP+N++ + WMP SCAYRLL +GK LP WH L G+ AV G SV GR + E +++DL G IV WP Sbjct: 6 EPFWRAKRLEQMTRAEWESLCDGCAKCCLVKLEDEDTGELEYTDIACRLLDAETCRCSDYANRSERVPDCVTLTPKNLEDI-DWMPPSCAYRLLKEGKDLPWWHPLVSGEYEAVRLAGMSVHGRFLFEDEADMEDLEGRIVSWP 148
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: A0A2E1EKR1_9HYPH (UPF0260 protein CMI62_16210 n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E1EKR1_9HYPH) HSP 1 Score: 192 bits (489), Expect = 1.610e-60 Identity = 90/146 (61.64%), Postives = 105/146 (71.92%), Query Frame = 1 Query: 10 STEPFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRCVNETGIEIDDLPGHIVRWP 447 S EPFWR KRL EM+ EEWE+LCDGC KCCLVKLEDEDTG+I YTD+AC LLDA CRC DY NR RV DCVTLT EN++ + WMP SCAY+L+ +GK LP WH L G+ AV G SV GR + E +++DL IV WP Sbjct: 4 SPEPFWRVKRLDEMTREEWESLCDGCAKCCLVKLEDEDTGEIEYTDIACRLLDAETCRCSDYPNRSTRVPDCVTLTVENLEDI-DWMPPSCAYKLIKEGKDLPWWHPLVSGEYEAVRLAGMSVYGRFLYEDEADMEDLEERIVDWP 148
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: A0A085FPK6_9HYPH (UPF0260 protein FG93_01769 n=2 Tax=unclassified Bosea TaxID=2653178 RepID=A0A085FPK6_9HYPH) HSP 1 Score: 190 bits (483), Expect = 1.940e-59 Identity = 87/145 (60.00%), Postives = 103/145 (71.03%), Query Frame = 1 Query: 16 EPFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRC-VNETGIEIDDLPGHIVRWP 447 EPFWR+K L EM+P+EWE+LCDGCG+CCLVKLEDEDTG+IH TD+ C L DAG CRC DYSNR V DCVTLTP+ + R W+P +CAYRL+ +G+ LP WH L GD V G SV GR +E + DDLP IV WP Sbjct: 9 EPFWRSKTLDEMTPQEWESLCDGCGRCCLVKLEDEDTGRIHATDIGCRLFDAGACRCKDYSNRSTIVPDCVTLTPDEV-RTLPWLPPTCAYRLVGEGRDLPWWHPLVSGDPATVVAAGVSVRGRVFASEDDVHEDDLPERIVNWP 152
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: A0A6G6WX36_9HYPH (UPF0260 protein G5V57_19075 n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WX36_9HYPH) HSP 1 Score: 189 bits (480), Expect = 3.770e-59 Identity = 86/146 (58.90%), Postives = 104/146 (71.23%), Query Frame = 1 Query: 13 TEPFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRCVNETGIEIDDLPGHIVRWPR 450 +EPFW+ K L EM+PEEWE+LCDGCG+CCLVKLEDEDTGKIH+T++AC LLD CRC DY+NR RV DCV LTPEN+ + W+P SCAYR LA G+PL WH L G V G SV GR +E G+ +DL H+ + PR Sbjct: 2 SEPFWKTKTLAEMTPEEWESLCDGCGRCCLVKLEDEDTGKIHFTNLACKLLDRKSCRCSDYTNRSARVPDCVRLTPENVGTLN-WLPDSCAYRRLAKGQPLAWWHPLVSGRKATVMEAGISVSGRIRSEEGVAEEDLEDHLWKLPR 146
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: A0A059FP21_9PROT (UPF0260 protein HJO_10039 n=2 Tax=Hyphomonas TaxID=85 RepID=A0A059FP21_9PROT) HSP 1 Score: 188 bits (478), Expect = 8.630e-59 Identity = 84/144 (58.33%), Postives = 105/144 (72.92%), Query Frame = 1 Query: 13 TEPFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRCVNETGIEIDDLPGHIVRW 444 TEPFW+ L +M E+WE+LCDGC KCCL+KLEDEDTG+I YT + C LLDAG C+C DY+NR+++V DCV LTP I+ + WMPS+CAYRL+ +GKPLP WH+L CGD VH G SV GR V+E + DD+ IV W Sbjct: 8 TEPFWKTIPLDKMDSEQWESLCDGCAKCCLLKLEDEDTGEIAYTKLHCTLLDAGTCQCSDYANRKQKVPDCVKLTPAGIEELP-WMPSTCAYRLIHEGKPLPDWHHLVCGDRERVHTEGHSVRGRTVSEDTVFEDDMEDFIVDW 150
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: A0A2E7IPT0_9GAMM (UPF0260 protein CMN85_12545 n=1 Tax=Spongiibacteraceae bacterium TaxID=2026793 RepID=A0A2E7IPT0_9GAMM) HSP 1 Score: 187 bits (476), Expect = 1.180e-58 Identity = 83/141 (58.87%), Postives = 100/141 (70.92%), Query Frame = 1 Query: 22 FWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRCVNETGIEIDDLPGHIVRW 444 FW NK L MS +EWE LCDGCGKCCL KLEDED GKI+YT VAC LLD CRC Y+ R CV LTP+++D + QW+P SC+YR + DG+ LPQWH+L CGD VHR G S++GRCV+E + DDL HIV+W Sbjct: 4 FWENKTLSSMSDKEWELLCDGCGKCCLHKLEDEDDGKIYYTGVACQLLDVESCRCSHYAERLSLEPTCVKLTPDDVDNL-QWLPGSCSYRRVQDGRGLPQWHHLICGDREEVHRGGHSIMGRCVSERHVHPDDLVEHIVQW 143
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Match: A0A062U859_9PROT (UPF0260 protein HY2_08985 n=3 Tax=Hyphomonas TaxID=85 RepID=A0A062U859_9PROT) HSP 1 Score: 187 bits (476), Expect = 1.630e-58 Identity = 80/144 (55.56%), Postives = 104/144 (72.22%), Query Frame = 1 Query: 13 TEPFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACALLDAGKCRCIDYSNRQKRVSDCVTLTPENIDRVKQWMPSSCAYRLLADGKPLPQWHYLECGDLGAVHRLGKSVLGRCVNETGIEIDDLPGHIVRW 444 TEPFW+ K L +M+ +EWE+LCDGCGKCCL+KLEDEDTG+I YT + C L D+G C+C DY NR+K V DCV LTP+ ++ ++ WMP +CAYRL+ +GK LP WHYL CGD +H G S+ GR V+E + +D IV W Sbjct: 8 TEPFWKTKTLDQMNRQEWESLCDGCGKCCLLKLEDEDTGEIAYTRLHCRLFDSGTCQCADYENRKKIVEDCVILTPQKVEEIR-WMPKTCAYRLIHEGKDLPSWHYLVCGDRERIHEEGHSIRGRTVSEDTVFEEDTEDWIVDW 150 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10332.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10332.1.1 >prot_P-wetherbeei_contig10332.1.1 ID=prot_P-wetherbeei_contig10332.1.1|Name=mRNA_P-wetherbeei_contig10332.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp MSTEPFWRNKRLGEMSPEEWEALCDGCGKCCLVKLEDEDTGKIHYTDVACback to top mRNA from alignment at P-wetherbeei_contig10332:146..598- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10332.1.1 ID=mRNA_P-wetherbeei_contig10332.1.1|Name=mRNA_P-wetherbeei_contig10332.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig10332:146..598- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10332:146..598- >mRNA_P-wetherbeei_contig10332.1.1 ID=mRNA_P-wetherbeei_contig10332.1.1|Name=mRNA_P-wetherbeei_contig10332.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig10332:146..598- (Phaeothamnion wetherbeei SAG_119_79)back to top |