mRNA_P-wetherbeei_contig10322.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: D8LTR3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR3_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 3.230e-20 Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 158 FGAVASIGMRMGIKHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVAPGIMTPRQRERAAL 433 G + + G+RM K+++K+ RKR+P+ K +YKG KEG + S+GRF+ DPE+RLEI+APDL GFKL PYV+ + PR+ +A L Sbjct: 4 IGNIVTGGLRMS-KYISKSARKRIPMTSKMGNKNFYKGKGATKEGTINSRGRFIVDPEKRLEIIAPDLDGFKLKPYVSKAVWKPRRGGQALL 94
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: A0A1Z5J9Q3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9Q3_FISSO) HSP 1 Score: 89.4 bits (220), Expect = 3.450e-20 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 197 KHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVAPGI-MTPRQRER 424 K+++KA +KR+ L KRA G+YKGN KEGRLTSKG+F+ DP RRLE+V PDLTGFKL PY+A + P +++R Sbjct: 31 KYLSKAAKKRLVLTTKRAHKGFYKGNGATKEGRLTSKGKFIVDPLRRLELVVPDLTGFKLKPYIARSVPRVPPEQQR 107
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: A0A7S4A9E0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9E0_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 9.050e-20 Identity = 40/65 (61.54%), Postives = 54/65 (83.08%), Query Frame = 2 Query: 197 KHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVA 391 K+++K+ RKR+PL KRA GYYKGN KEGRLTSKG+F++DP+++LE++APDL GF L PY+A Sbjct: 54 KYISKSARKRLPLTTKRAGKGYYKGNGSTKEGRLTSKGKFVSDPKKKLELMAPDLEGFNLKPYIA 118
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: A0A448ZFN2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFN2_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 5.630e-19 Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 2 Query: 197 KHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVA 391 K+++K+ RKR+PL KRA GYYKG KEGRLTSKG+F+ DP+++LE++ PDL GF L PY+A Sbjct: 19 KYISKSARKRMPLTTKRAGKGYYKGKGATKEGRLTSKGKFIPDPKKKLELIVPDLEGFNLKPYIA 83
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: B5YMJ4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMJ4_THAPS) HSP 1 Score: 87.0 bits (214), Expect = 1.000e-18 Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 197 KHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVAPGI--MTPRQR 418 K+++K+ KR+PL KRA GYYKG C EGRLTSKG+F+A+P ++L+++ PDL GFKL PY+A I + P QR Sbjct: 82 KYLSKSATKRLPLDTKRAKKGYYKGKGCTSEGRLTSKGKFIANPLKKLQLIVPDLEGFKLKPYIAKSISKVPPEQR 157
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: A0A7S2KAW4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KAW4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.960e-18 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 197 KHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVAPGI--MTPRQR 418 K++TKA KR+PL K+ GYYKGN EGR+TSKG+F+ADP ++L++V PDL GFKL PY+A + + P QR Sbjct: 67 KYLTKAATKRLPLTNKKVKKGYYKGNGATVEGRITSKGKFIADPMKKLQLVVPDLEGFKLKPYIASAVSKLPPEQR 142
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: A0A7S3L6Q4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6Q4_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 8.540e-18 Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 158 FGAVASIG-MRMGIKHVTKAGRKRVPLHVKRAPIG-YYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVAPGIMT-PRQRER 424 F A ++G +R K+++K+ RKR PL KRA G +YKG KEGRLTSKG+F+ DP +RLE++ PDLTGFKL PY+A + P +++R Sbjct: 15 FTASLNLGQVRFMSKYMSKSARKRQPLTTKRASRGGFYKGKGGTKEGRLTSKGKFIVDPLKRLELIVPDLTGFKLKPYIAASVPKHPPEKQR 106
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: A0A7S1D0Q8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0Q8_CYCTE) HSP 1 Score: 81.3 bits (199), Expect = 3.990e-17 Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 158 FGAVASIGMRMGIKHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVA 391 F + S +R K ++K+ KR+PL KRA G+YKG K+GRLTSKG+F+ DP +RLE+V PDL GFKL PY+A Sbjct: 10 FLSPVSSSVRHMSKFLSKSATKRLPLGTKRARKGFYKGKGGTKDGRLTSKGKFIVDPAKRLELVVPDLQGFKLKPYIA 87
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: K0SRM2_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SRM2_THAOC) HSP 1 Score: 84.0 bits (206), Expect = 5.540e-17 Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 197 KHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVA 391 K+++K+ KR+PL+ KRA GYYKG C EGRLTSKG+F+ADP ++L ++ PDL GF L PY+A Sbjct: 141 KYLSKSATKRLPLNTKRAKKGYYKGKGCTSEGRLTSKGKFIADPLKKLNLIVPDLEGFTLKPYIA 205
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Match: A0A7S2RFS1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFS1_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 6.090e-17 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 182 MRMGIKHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLTSKGRFLADPERRLEIVAPDLTGFKLLPYVA 391 +R+ K+ A RKR+PL KRA GYYKGN CR EGR TSKG F+ D R LE+V PDL GFKL PYV+ Sbjct: 29 LRLFSKYYGNALRKRLPLSPKRARKGYYKGNGCRSEGRHTSKGGFVVDKNRLLELVVPDLQGFKLKPYVS 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10322.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10322.1.1 >prot_P-wetherbeei_contig10322.1.1 ID=prot_P-wetherbeei_contig10322.1.1|Name=mRNA_P-wetherbeei_contig10322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp MLGFGAVASIGMRMGIKHVTKAGRKRVPLHVKRAPIGYYKGNQCRKEGRLback to top mRNA from alignment at P-wetherbeei_contig10322:1710..2343- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10322.1.1 ID=mRNA_P-wetherbeei_contig10322.1.1|Name=mRNA_P-wetherbeei_contig10322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=634bp|location=Sequence derived from alignment at P-wetherbeei_contig10322:1710..2343- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10322:1710..2343- >mRNA_P-wetherbeei_contig10322.1.1 ID=mRNA_P-wetherbeei_contig10322.1.1|Name=mRNA_P-wetherbeei_contig10322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig10322:1710..2343- (Phaeothamnion wetherbeei SAG_119_79)back to top |