mRNA_P-wetherbeei_contig10293.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: D7FML5_ECTSI (Putative: similar to cytoplasmic dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML5_ECTSI) HSP 1 Score: 132 bits (331), Expect = 8.110e-34 Identity = 60/91 (65.93%), Postives = 75/91 (82.42%), Query Frame = 1 Query: 1 CEDRATTDLHWSPHHPELLLAAYSARGRGVDPAAVAGTGCYNDADGLVLVWSLAVQSRPEYVLTSQSPVLCARFHEFDSHLIFGSTYSGQV 273 C++R+ TDL WSPHHPEL+LA+Y+ARG G+D A + + + DADGLVLVWS+A+Q RPEY L+SQSPVL ARFH FD+H+I G TYSGQV Sbjct: 339 CQERSLTDLQWSPHHPELVLASYTARGHGLD--ATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQV 427
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: A0A836C896_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C896_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.850e-32 Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 1 Query: 1 CEDRATTDLHWSPHHPELLLAAYSARGRGVD-PAAVAGTGCYNDA--DGLVLVWSLAVQSRPEYVLTSQSPVLCARFHEFDSHLIFGSTYSGQV 273 C DRA TD+HWSPH+PELLL AYSA GRG + +A+ G DA DGLVLVWSLA+ SRPE++L SQSP+L ARFHEFD+HL+ G +YSGQV Sbjct: 111 CGDRAITDVHWSPHYPELLLVAYSASGRGQNLESALLGAPAAGDAHPDGLVLVWSLALPSRPEFILYSQSPILTARFHEFDAHLVVGGSYSGQV 204
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: A0A4P9Z315_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z315_9FUNG) HSP 1 Score: 95.5 bits (236), Expect = 6.370e-21 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 1 CEDRATTDLHWSPHHPELLLAAYSARGRGVDPAAVAGTGCYNDADGLVLVWSLAVQSRPEYVLTSQSPVLCARFHEFDSHLIFGSTYSGQV 273 C+ RATTD+HWSP HPEL++AAY+ + N+ DGLVLVW++ + RPE+ +QS VL ARF +F ++L+ G TYSGQ+ Sbjct: 283 CQHRATTDVHWSPKHPELVVAAYNKNAMAI-----------NEPDGLVLVWNVHLVERPEFTFHAQSDVLSARFSDFHANLVIGGTYSGQI 362
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: A0A2P2I7P5_9CRUS (Cytoplasmic dynein 1 intermediate chain 2 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2I7P5_9CRUS) HSP 1 Score: 85.1 bits (209), Expect = 2.290e-17 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 1 CEDRATTDLHWSPHHPELLLAAYSARGRGVDPAAVAGTGCYNDADGLVLVWSLAVQSRPEYVLTSQSPVLCARFHEFDSHLIFGSTYSGQV 273 C R+ T + WSP HPEL L +Y++ V + DGLV++WSL + SRPE V T Q+ VL A+FH ++HLIFG T+SGQ+ Sbjct: 85 CSGRSVTSIDWSPLHPELFLTSYASSTDEV---------LSDSPDGLVIIWSLRLPSRPERVFTCQAAVLTAQFHPKNAHLIFGGTFSGQI 166
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: A0A6A7FZX7_9CRUS (Cytoplasmic dynein 1 intermediate chain 2-like isoform X4 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FZX7_9CRUS) HSP 1 Score: 85.1 bits (209), Expect = 2.840e-17 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 1 CEDRATTDLHWSPHHPELLLAAYSARGRGVDPAAVAGTGCYNDADGLVLVWSLAVQSRPEYVLTSQSPVLCARFHEFDSHLIFGSTYSGQV 273 C R+ T + WSP HPEL L +Y++ V + DGLV++WSL + SRPE V T Q+ VL A+FH ++HLIFG T+SGQ+ Sbjct: 293 CSGRSVTSIDWSPLHPELFLTSYASSTDEV---------LSDSPDGLVIIWSLRLPSRPERVFTCQAAVLTAQFHPKNAHLIFGGTFSGQI 374
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: A0A8J1W1E4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1W1E4_9DINO) HSP 1 Score: 83.6 bits (205), Expect = 9.850e-17 Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 7 DRATTDLHWSPHHPELLLAAYSARGRGVDPAAVAGTGCYNDADGLVLVWSLAVQSRPEYVLTSQSPVLCARFHEFDSHLIFGSTYSGQV 273 DR TTD+ WSPH PEL A+Y + +D +G+V VW+LA+Q+RPE+V T+ S VL RF +F+ L GSTYSG + Sbjct: 281 DRTTTDVQWSPHFPELFCASYGPKKNAT----------LSDDEGVVCVWNLALQNRPEFVFTAGSQVLSVRFDKFNPALYLGSTYSGSI 359
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: A0A1Y2GI44_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GI44_9FUNG) HSP 1 Score: 80.1 bits (196), Expect = 1.620e-15 Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 4 EDRATTDLHWSPHHPELLLAAYSARGRGVDPAAVAGTGCYNDADGLVLVWSLAVQSRPEYVLTSQSPVLCARFHEFDSHLIFGSTYSGQV 273 ++R+ TD+ WS HPEL++++Y+ +P AV N+ DG+V VW++ + RPE+V SQS VL RF +F +LI G TYSGQ+ Sbjct: 255 KNRSVTDVGWSTKHPELIVSSYNK-----NPLAV------NEPDGIVCVWNVHLDDRPEFVFHSQSDVLTVRFSDFHPNLIIGGTYSGQI 333
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: A0A484DZZ2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZZ2_BRELC) HSP 1 Score: 79.7 bits (195), Expect = 2.220e-15 Identity = 47/104 (45.19%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 10 RATTDLHWSPHHPELLLAAYSARGRGVDPA----------------AVAGTGCYNDADGLVLVWSLAVQSRPEYVLTSQSPVLCARFHEFDSHLIFGSTYSGQV 273 RA TD+ SP +PEL L AYSARG D A VA T + +G+VL+WS A+ SRPEY T S V A F+ FD H+I G TYSGQ+ Sbjct: 255 RAVTDVDVSPFYPELTLVAYSARGFVEDEAKDGSRSSQWDTMGNSATVALTDVASTMEGVVLLWSTALPSRPEYRFTCHSQVTSACFNPFDRHIIIGGTYSGQI 358
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: M5GEQ2_DACPD (WD40 repeat-like protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GEQ2_DACPD) HSP 1 Score: 78.6 bits (192), Expect = 5.680e-15 Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 4 EDRATTDLHWSPHHPELLLAAYSARGRGVDPAAVAGTGCYNDADGLVLVWSLAVQSRPEYVLTSQ-SPVLCARFHEFDSHLIFGSTYSGQV 273 ++R+ TD+ WS PEL +AAY+ +P+A+ ND DG+VLVW++ + RPE+VL SQ S VL RF + S+LIFG TYSG++ Sbjct: 293 KNRSVTDVDWSHKFPELCVAAYNK-----NPSAL------NDPDGVVLVWNMHLLERPEFVLHSQQSDVLAVRFSPYQSNLIFGGTYSGEI 372
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Match: A0A397GQ61_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GQ61_9GLOM) HSP 1 Score: 78.2 bits (191), Expect = 7.700e-15 Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 4 EDRATTDLHWSPHHPELLLAAYSARGRGVDPAAVAGTGCYNDADGLVLVWSLAVQSRPEYVLTSQSPVLCARFHEFDSHLIFGSTYSGQV 273 ++R+ TD++WS +PEL++++Y+ +P A+ N+ DG+VLVWSL + RPEY+ SQS VL F EF +I G TYSGQ+ Sbjct: 268 KNRSVTDVNWSHKNPELVVSSYNK-----NPIAM------NEPDGVVLVWSLRLLERPEYIFHSQSDVLTTSFSEFHPTIIIGGTYSGQI 346 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10293.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10293.1.1 >prot_P-wetherbeei_contig10293.1.1 ID=prot_P-wetherbeei_contig10293.1.1|Name=mRNA_P-wetherbeei_contig10293.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp CEDRATTDLHWSPHHPELLLAAYSARGRGVDPAAVAGTGCYNDADGLVLVback to top mRNA from alignment at P-wetherbeei_contig10293:1612..2188+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10293.1.1 ID=mRNA_P-wetherbeei_contig10293.1.1|Name=mRNA_P-wetherbeei_contig10293.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=577bp|location=Sequence derived from alignment at P-wetherbeei_contig10293:1612..2188+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10293:1612..2188+ >mRNA_P-wetherbeei_contig10293.1.1 ID=mRNA_P-wetherbeei_contig10293.1.1|Name=mRNA_P-wetherbeei_contig10293.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=282bp|location=Sequence derived from alignment at P-wetherbeei_contig10293:1612..2188+ (Phaeothamnion wetherbeei SAG_119_79)back to top |