mRNA_P-wetherbeei_contig10229.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10229.1.1
Unique NamemRNA_P-wetherbeei_contig10229.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A6L5FDW1_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FDW1_9HYPH)

HSP 1 Score: 252 bits (644), Expect = 8.420e-78
Identity = 169/369 (45.80%), Postives = 224/369 (60.70%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASICDAAVAGDLIVVPGFSGHRLG---VAAHTGVTASVQQKAMRLSGVVRAVSHAASADGFLIEEQTGD---LFFVEKGADGLSVAEAATVDGRGLGTITLAQTPARAL---GVGTVRADRLFDLSLLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALGQGDR--VTSAMAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRYAALSPST 1074
            MDL L+ EQ LL+DS A  + A G  K ARG R     FS    R     GWLGILVP  AGGLGLG  ELALV+++AGR L  EP+  AA++A AL   ++P    + D A+ G  ++VP F     G   +A  T V    +  A+RL+G    V  A  ADGFL+  +  D   L +V + A G +++   TV+GR L T+TL   PA  +          D L +L LL  S+EL+GVM  A ++T++YL+ R QFG+PIGSFQALQH+A + + RI ++RSL+FQ     D   +  A A A+K+  S +A+IVT++ IQ+HGAIGFTD+HDIGLY+KRAM LSA  GNAA  RRRY A +  T
Sbjct:    5 MDLYLTSEQALLRDSAAKFIEAAG-PKAARGFRAQDPSFSAPRLRHAGELGWLGILVPGAAGGLGLGLTELALVLEQAGRGLVCEPIGLAAISAAALGQGRTPH--PVLDRAMTGAALIVPAFQESAHGDDPLAPRTHVAG--EDGALRLTGKKMFVC-ADGADGFLVNARGRDGPALCYVARNAPGCTLSRTQTVEGRKLATLTLTDAPADLIPPHSSSRNAVDALHNLVLLALSSELLGVMEKANEITLDYLRLRKQFGKPIGSFQALQHQAANIYVRIEATRSLVFQIAANNDAFCIDPATAIALKAKASEDAMIVTEACIQLHGAIGFTDEHDIGLYLKRAMLLSALFGNAAAQRRRYIAAADLT 367          
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A520NS74_9PROT (Acyl-CoA dehydrogenase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NS74_9PROT)

HSP 1 Score: 243 bits (619), Expect = 3.520e-74
Identity = 162/359 (45.13%), Postives = 203/359 (56.55%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASICDAAVAGDLIVVPGF-SGHRLGVAAHTGVTASVQQKAMRLSGVVRAVSHAASADGFLIEEQTGD-LFFVEKGADGLSVAEAATVDGRGLGTITLAQTPARALG---VGTVRADRLFDLSLLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALGQGDR--VTSAMAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRYA 1056
            MDLLL+EEQ +L+DS A      GG  R R +R +    + D+  Q A  GWL IL P+ +GGL LG  EL LV +E G+ L PEPVA  A  A AL D          D  V GD +V+P    G R        +TA+   K + L G+   V+  A A  FL+     D +      AD   +A   T+DG   G+I L    A  +      T R   L D   +  +AEL+GVM AA DMTVE+LKTR QF +PIG+FQALQHRAVD+   I   RSL++QA G  D   V S +A+A  S  +  AL V KSAIQMHG IGFTD+HDIGLY+KRAM L+A  GNA +HR+RYA
Sbjct:    1 MDLLLTEEQGMLRDSAATFTERHGGAARLRDMRGSETKINTDIWHQAAEAGWLAILAPESSGGLNLGITELCLVAEELGKGLVPEPVAAVAAVARALGDNA--------DEIVGGDRVVLPALMEGPRAIGDEPPALTATADGKYLSLDGLKTGVATPADAGQFLVSASGADGIVLALVDADKTEIASGETIDGAATGSIILNGAKATLVAGSNEATARIAALLDTLHMSNAAELLGVMEAAQDMTVEFLKTREQFDKPIGAFQALQHRAVDNLAAIEMCRSLIYQAAGAIDDGGVASGLASAALSRSAKSALDVCKSAIQMHGGIGFTDEHDIGLYLKRAMALAARYGNAGLHRKRYA 351          
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A127F586_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F586_9HYPH)

HSP 1 Score: 242 bits (618), Expect = 5.930e-74
Identity = 168/374 (44.92%), Postives = 222/374 (59.36%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASICDAAVAGDLIVVPGFSGHRLG--------VAAHTGVTASVQQKAMRLSGVVRAVSHAASADGFLIEEQTGD---LFFVEKGADGLSVAEAATVDGRGLGTITLAQTPARALGV---GTVRADRLFDLSLLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALGQGD--RVTSAMAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRYAALSPST 1074
            M+L L+ EQ LL+DS A  + A G  K AR  R++   F+    R+    GWLGILVP+ AGGLGLG  ELALV+++AGR L  EP+  AA++A AL     P    +    + GD +VVP       G         A  TG T       ++L+G    V  A  ADGFL+     D   L FV + A G ++  A TVDGR L  + L QTPA  +          D L++LSL+  SAEL+GVM  A  +T++YL+ R QFG+ IGSFQALQH+A + + R  + RSL+FQ  G  +  R+  AMAAA K+  S +AL VT++ IQ+HGAIGFTD+HDIGLY+KRAM LS+ +GNAA  RRRY A++  T
Sbjct:    1 MELNLTSEQGLLRDSAAKFIGAAG-PKIARKFRDSDHSFAPQRLREAGELGWLGILVPESAGGLGLGLTELALVLEQAGRGLVCEPIGLAAISAAALGFAPKPL--PLLSRVMTGDALVVPALQERAHGDDPLEPSTEATGTGTT-------LQLTGQKMFVC-ADGADGFLVSASGRDGPVLCFVARDALGCTLQPAETVDGRRLAALYLDQTPADLVSPYPSSRDAVDALYNLSLVALSAELLGVMEEAQRITLDYLRIRKQFGKLIGSFQALQHQAANIYLRTEAVRSLIFQVAGNNEPWRIDPAMAAAAKAKASEDALFVTEACIQLHGAIGFTDEHDIGLYLKRAMLLSSLMGNAAAQRRRYVAIAGLT 363          
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A2E5V486_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5V486_9PROT)

HSP 1 Score: 236 bits (601), Expect = 6.480e-71
Identity = 157/373 (42.09%), Postives = 220/373 (58.98%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASICDA---AVAGDLIVVPGFSGHRLGVAAHTGVTASVQQKAMRLSGVVRAVSHAASADGFLIEEQTGD---LFFVEKGADGLSVAEAATVDGRGLGTITLAQTPARA-----LGV--GTVRADRLFDLSLLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQAL-----GQGDRVTSAMAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRYAALS 1065
            M+L+L+E+Q+LL++S    +   GG  + R LR T  GF     + ++  GWL ++VP+++GGLGLG  ELALV+++AGR L  EPVA  A  A A+   ++   AS  +A    V G+ I++P      +       + A       +L+GV R V  + +A GF+++  T D   L  V +   GL++  + +VDG   GT+  ++    A      GV  G   A  + D  LL  SAE++GVM  AL++   Y+KTR QFG PIGSFQALQHRAV++   I  +RSLL+QA      G G+R   AM AAVK+  S   + VTKS IQMHGAIGFTD++D GLY++RAM L+A  GNAA H+ RYA LS
Sbjct:    9 MELVLNEDQKLLRESAEKLVERCGGAGKHRNLRNTEPGFDDSRLKTISKAGWLSLMVPEKSGGLGLGVTELALVLEQAGRGLLTEPVAALAAAARAVGVGQAATGASTEEALNKVVTGENILIPVLQDPLVPDEKRERIFAEHYHYGYQLTGVRRGVPFSDAAHGFIVDANTSDGIILIIVPQDTRGLNIKISRSVDGTAHGTLEFSEVTLMADELLISGVRQGEALAANIHDRMLLGVSAEMLGVMEQALELATSYMKTREQFGHPIGSFQALQHRAVNNQIEIELTRSLLYQACEAFDSGNGNR---AMVAAVKTRASEAVVSVTKSVIQMHGAIGFTDEYDAGLYLRRAMTLAAQYGNAAEHKERYAILS 378          
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A537NGP3_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NGP3_9PROT)

HSP 1 Score: 234 bits (596), Expect = 1.010e-70
Identity = 163/369 (44.17%), Postives = 215/369 (58.27%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASICDAAVAGDLIVVPGFSGHRLGVAAHTGVTASVQQK---AMRLSGVVRAVSHAASADGFLIEEQTGD---LFFVEKGADGLSVAEAATVDGRGLGTITLAQTPARAL---GVGTVRADRLFDLSLLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALGQGDR--VTSAMAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRYAALSPST 1074
            MDL L+ EQ LL+DS A    A  G K ARG RE    F+    RQ    GWLGILVP  A GLGLG  ELALV+++AGR L  EP+  AA++A  L          + + A+AG+ +VVP      +G   H  +    Q K   A RL+G    V  A  A+GFL+         L +V + A G +V+   TVDGR + T++LA TPA  +          D L+ L+L   S EL+GVM  A +MT++YL+ R QFG+ IGSFQALQH+AV+   R   +RSL+FQ     +   +  AMA A K+  S EA+ VT++ +Q+HGAIGFTD+HD+GLY+KRAM LS+  GNAA  RRRY A +  T
Sbjct:    1 MDLDLTTEQSLLRDSAA-KFVAAAGPKVARGFREQELSFAPARLRQAGDLGWLGILVPSSANGLGLGLSELALVLEQAGRGLVCEPIGLAAVSAAVLGPHP------MLERAMAGEALVVPALQ--EVGYD-HDPLAPRTQAKGNGAPRLTGQKMFVC-ADGAEGFLVSASAPHGPVLCYVARNAPGSTVSPTRTVDGRNIATLSLADTPADLIPPHASSRNAVDALYHLALFATSCELLGVMERAQEMTLDYLRIRKQFGKLIGSFQALQHQAVNIHIRTAVTRSLVFQIAANNETYSIDPAMAIAAKAKASEEAIAVTEACVQLHGAIGFTDEHDVGLYLKRAMLLSSLFGNAATQRRRYVAAAGLT 358          
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A537T3E8_9PROT (Acyl-CoA dehydrogenase n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537T3E8_9PROT)

HSP 1 Score: 233 bits (593), Expect = 3.290e-70
Identity = 163/367 (44.41%), Postives = 218/367 (59.40%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASICDAAVAGDLIVVPGFSGHRLGVAAHTGVTASVQQK-AMRLSGVVRAVSHAASADGFLIEEQTGD---LFFVEKGADGLSVAEAATVDGRGLGTITLAQTPARALGV---GTVRADRLFDLSLLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALGQGD--RVTSAMAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRYAALSPST 1074
            MDL L+ EQ LL+DS    + A G  K AR  RE    F+ +  R     GWLG+LVP  A GLGLG  ELAL++++AGR L  EP+  AA++A ALA        S+ D  + G  +VVP       G    +  T  V +  A+RLSG    V  A  ADGFL+     D   L +V + A G S+    TV+GR L T+ LAQ PA  +          + L++L+L+  S EL+GVM  A ++T++YL+ R QFG+ IGSFQALQH+AV+ +  + + RSL+FQ     +   +  AMA AVK+  S +AL VT++ IQ+HGAIGFTD+HDIGLY+KRAM LS+  GNAA  RRRY AL+  T
Sbjct:    1 MDLHLTSEQTLLRDSAVKFIQAAG-PKVARAFREQDPSFAPERLRWAGEVGWLGMLVPTSADGLGLGLTELALLLEQAGRGLVCEPIGFAAISAAALA--HGGTLHSMLDPLMTGRALVVPALEESGFGDDPLSPRTQMVGEAGALRLSGQKTFVC-ADGADGFLVSASGPDGPALCYVARNARGCSLTTTQTVEGRKLATLGLAQAPADLIPPHPSSRNAVEALYNLALMALSCELLGVMERAQEITLDYLRIRKQFGKLIGSFQALQHQAVNIYVCVEAIRSLVFQIAAHNEVFDIDPAMAIAVKAKASEDALFVTEACIQLHGAIGFTDEHDIGLYLKRAMLLSSLFGNAAAQRRRYVALANIT 363          
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A2E6GQC5_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GQC5_9PROT)

HSP 1 Score: 233 bits (594), Expect = 5.760e-70
Identity = 156/370 (42.16%), Postives = 217/370 (58.65%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASI---CDAAVAGDLIVVPGFSGHRLGVAAHTGVTASVQQKAMRLSGVVRAVSHAASADGFLIEEQTGD---LFFVEKGADGLSVAEAATVDGRGLGTITLAQTPARA---LGVGTVRADRL----FDLSLLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALG--QGDRVTSAMAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRYAALS 1065
            M+L+L+++QRLL++S    +   GG    R LRE+  GF  +    +A  GWL ++VP++A GLGLG  +LAL +++AGR L  EPV+  A +A A+   ++   A      ++ VAG+ I++P              V A       +L+G    V +A +ADGFL++  T D   L  V K   G+SV  + +VDG   GTI  A+    A   L  G  + + L    +D  +L  SAE++GVM  AL++ V Y++TR QFGRPIGSFQALQHRAV+D  +I  +RSLL+Q      G   + AM AAVK+  S   L VTKS IQMHGAIGFTD++D GL+++RAM L+A  GNA  HR RY  LS
Sbjct:    1 MELVLTDDQRLLKESAEKLVERCGGADAHRKLRESETGFDSERLGIIAEAGWLSLMVPEKADGLGLGITDLALALEQAGRGLMTEPVSALAASARAVGTGRAATGAGTEQALNSLVAGENILLPVLQDPSKPEENRERVFAEHYHYGYQLTGKRTGVPYADAADGFLVDANTSDGTILIIVPKDTFGVSVDISRSVDGTAHGTIEFAEATLMADELLIAGVKQGEALSVDIYDRLILGVSAEMLGVMEQALELAVAYMQTREQFGRPIGSFQALQHRAVNDHIQIELTRSLLYQVCSAIDGGHGSRAMVAAVKARASDAVLSVTKSVIQMHGAIGFTDEYDAGLFLRRAMTLAAQYGNATEHRERYVRLS 370          
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A2D8PPI8_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PPI8_9PROT)

HSP 1 Score: 231 bits (589), Expect = 1.160e-69
Identity = 157/361 (43.49%), Postives = 208/361 (57.62%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASICDAAVAGDLIVVPGFS-GHRLGVAAHTGVTASVQQKAMRLSGVVRAVSHAASADGFLIEEQT--GDLFFVEKGADGLSVAEAATVDGRGLGTITLAQTPARAL---GVGTVRADRLFDLSLLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALGQGDRVTSA--MAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRYAA 1059
            MDLLLSEEQ +L++S         G +R R +RE+     R + +++A  GWL I V ++AGGLGLGS E+ LV +E GR L PEPV  AA  A A+ +   P    I    V G  I++P  + G R        V AS     +RL+G    + +AA  +GF++   +  G +      AD L  A A T+DG  +  +    T AR +           RL D+  L  +AEL+GVM+ A ++TVEYLKTR QF RPIGSFQALQH+AVD+      S+SL++QA    D   SA  +A+A  S  +  AL V KS IQ+HG IGFTD+HDIGLY+KRAM LS   GNA +HR+RYAA
Sbjct:    1 MDLLLSEEQTMLRESAVTFAQRQNGAERLREIRESNTKIDRGLWQEMANAGWLAIAVSEDAGGLGLGSTEICLVAEELGRGLIPEPVPAAAAVAAAIGN--DPAVGEI----VGGSTIIMPALAEGKRAIGDEKPSVKASGSNDDVRLAGAKSGIPNAADCNGFVVSASSPDGPVLAYVAAADALFSA-ADTIDGGTIDVLQFDDTSARIVCGPNEAPPAITRLLDMLHLATAAELLGVMHQAHEITVEYLKTREQFDRPIGSFQALQHQAVDNLVATEMSKSLIYQAAQAIDARGSAPGLASAALSRTATSALDVCKSTIQLHGGIGFTDEHDIGLYLKRAMTLSVRYGNAGLHRKRYAA 354          
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A2D6G032_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6G032_9PROT)

HSP 1 Score: 239 bits (609), Expect = 9.810e-69
Identity = 156/363 (42.98%), Postives = 214/363 (58.95%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASICDAAVAGDLIVVPGFSGHRLGVAAHTGVTASVQQKAMRLSGVVRAVSHAASADGFLIEEQTGD---LFFVEKGADGLSVAEAATVDGRGLGTITLAQTP---ARALGVGTVRA---DRLFDLSLLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALGQGDRVTSA---MAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRY 1053
            M  +LSE+Q L+++S        GG  R R LR+  +GF  +      G+GWL +L P+ AGG GLG++EL LV ++AGR LA  P+  AA   +ALA+    +A  +   A+AG+ ++ P   G   G AAH           ++LSG + AV  AA+ADGF+++   G+   L  VE  A GLS   A  +DG  LG ++L + P   A  L  G   A    RL  +  L  SAEL+GVM+AA +MT EYLKTR+QFGR + +FQALQHRAVD+F  + S+R+L+F+A G  DR       +A+A K+      + V  S IQ+HGAIGFTD+HDIGLY+KRAM +SA  G    H +RY
Sbjct:    1 MQTVLSEDQALIRESAQRFGADHGGGDRLRALRDGASGFDPEDLGDAGGDGWLALLAPESAGGAGLGALELCLVAEQAGRALATFPLVPAAAGVLALAEGGESFA-ELLAGAIAGEALIGPALQGDSRGDAAHPVGLTGGSGGDLKLSGRLMAVPAAANADGFIVDAGEGESRALVLVEADAPGLSAEAARNIDGSPLGVVSLGEVPVAEAAVLARGDAAALLRRRLDTVIQLGLSAELIGVMDAAQEMTNEYLKTRSQFGRTLSAFQALQHRAVDNFMLVESARALVFEAAGFSDRDDGHADWLASAAKAKAGPAVIEVCNSCIQLHGAIGFTDEHDIGLYLKRAMAVSALYGPPPAHLKRY 362          
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Match: A0A1F4FN66_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FN66_9PROT)

HSP 1 Score: 226 bits (576), Expect = 1.650e-67
Identity = 155/368 (42.12%), Postives = 218/368 (59.24%), Query Frame = 1
Query:    1 MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGEGWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADCKSPWAASICDAAVAGDLIVVPGFSGHRLGVAAHTGVTASVQQKA-MRLSGVVRAVSHAASADGFLIEEQTGD----LFFVEKGADGLSVAEAATVDGRGLGTIT---LAQTPARALGVGTVRADRLFDLS---LLMASAELVGVMNAALDMTVEYLKTRTQFGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALGQGD--RVTSAMAAAVKSHVSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRRYAALS 1065
            MD +L E+Q LL+DS A     +GG  RAR LR        D  R++ G GW  IL+P+E+GGLGLG  +L+LV++E+G+ L   P+  A + A+ALA  +S   A++ D  +AG  + VP  +    G  A      +++  A  RL G VR V  A SAD FL+  + G     L  V +  +GL V  AA VDG     +    +A   A+ L  G    +R+  +    +L  SAELVG+ +AALDMT+EYLK R QFG+P+GSFQALQHRAV+ +  I  +RSL+++     D  +   AM +A+K+  S  AL VT++A+QMHGAIG+TD+HDIGLY KRA+ L+A  GN   H  R++ L+
Sbjct:    5 MDAILDEQQALLRDSAARLCAEVGGPGRARALRYAEEDMDHDAWRRICGTGWPSILIPEESGGLGLGLFDLSLVLEESGKQLLMVPLLQACVAALALA--RSGDRATLADV-LAGTRLAVPVLADEENGYNAGATHPVAIKDGAGYRLDGTVRFVPFALSADTFLVAARVGGGELLLAAVARNREGLRVKTAANVDGSTSSDLFFDHVAVQGAKVLAHGETARERVAMMQSVLVLGTSAELVGLADAALDMTLEYLKFRKQFGKPLGSFQALQHRAVNGYIDIELNRSLVYRVFSAWDAGQRHPAMVSALKARTSRSALEVTRAALQMHGAIGYTDEHDIGLYYKRAVVLAALYGNDNNHASRFSRLT 369          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10229.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L5FDW1_9HYPH8.420e-7845.80Acyl-CoA dehydrogenase n=1 Tax=Hyphomicrobiales ba... [more]
A0A520NS74_9PROT3.520e-7445.13Acyl-CoA dehydrogenase n=2 Tax=Rhodospirillaceae b... [more]
A0A127F586_9HYPH5.930e-7444.92Acyl-CoA dehydrogenase n=1 Tax=Rhodoplanes sp. Z2-... [more]
A0A2E5V486_9PROT6.480e-7142.09Uncharacterized protein n=2 Tax=Rhodospirillaceae ... [more]
A0A537NGP3_9PROT1.010e-7044.17Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria... [more]
A0A537T3E8_9PROT3.290e-7044.41Acyl-CoA dehydrogenase n=5 Tax=Alphaproteobacteria... [more]
A0A2E6GQC5_9PROT5.760e-7042.16Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A2D8PPI8_9PROT1.160e-6943.49Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A2D6G032_9PROT9.810e-6942.98Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A1F4FN66_9PROT1.650e-6742.12Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10229contigP-wetherbeei_contig10229:865..1944 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1429916.X566_10580
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size1080
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.14e-56
EggNOG OGsCOG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TQRA@28211|Alphaproteobacteria,3JWC4@41294|Bradyrhizobiaceae
DescriptionAcyl-CoA dehydrogenase, middle domain
Cds size1080
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185860.118302-CDS-P-wetherbeei_contig10229:864..19441683185860.118302-CDS-P-wetherbeei_contig10229:864..1944Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10229 865..1944 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10229.1.1prot_P-wetherbeei_contig10229.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10229 865..1944 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10229.1.1

>prot_P-wetherbeei_contig10229.1.1 ID=prot_P-wetherbeei_contig10229.1.1|Name=mRNA_P-wetherbeei_contig10229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=360bp
MDLLLSEEQRLLQDSVAGTLTALGGVKRARGLRETGAGFSRDVHRQLAGE
GWLGILVPQEAGGLGLGSIELALVMQEAGRHLAPEPVATAALTAMALADC
KSPWAASICDAAVAGDLIVVPGFSGHRLGVAAHTGVTASVQQKAMRLSGV
VRAVSHAASADGFLIEEQTGDLFFVEKGADGLSVAEAATVDGRGLGTITL
AQTPARALGVGTVRADRLFDLSLLMASAELVGVMNAALDMTVEYLKTRTQ
FGRPIGSFQALQHRAVDDFTRIVSSRSLLFQALGQGDRVTSAMAAAVKSH
VSGEALIVTKSAIQMHGAIGFTDDHDIGLYMKRAMWLSASLGNAAVHRRR
YAALSPSTP*
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mRNA from alignment at P-wetherbeei_contig10229:865..1944-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10229.1.1 ID=mRNA_P-wetherbeei_contig10229.1.1|Name=mRNA_P-wetherbeei_contig10229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1080bp|location=Sequence derived from alignment at P-wetherbeei_contig10229:865..1944- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCTGTTGTTGAGCGAGGAGCAGCGCCTGCTGCAGGACAGCGTTGC AGGGACATTGACGGCACTGGGTGGCGTCAAGCGCGCGCGTGGGTTGCGTG AGACAGGCGCGGGCTTCAGCCGCGACGTTCACCGGCAGTTGGCAGGCGAG GGTTGGCTCGGCATTCTCGTGCCGCAGGAGGCGGGCGGGCTCGGGCTCGG CTCCATCGAACTCGCGCTCGTGATGCAGGAAGCCGGTCGTCACCTCGCGC CCGAGCCGGTTGCAACAGCCGCGCTTACGGCCATGGCATTGGCGGACTGC AAATCGCCATGGGCTGCTTCGATCTGCGATGCAGCCGTTGCCGGCGATCT CATCGTGGTCCCGGGATTTTCGGGGCATCGTTTGGGTGTGGCCGCACATA CCGGCGTGACCGCCAGTGTTCAGCAGAAAGCGATGAGACTTTCCGGCGTG GTCCGGGCCGTGTCGCACGCGGCGAGCGCGGATGGCTTTTTGATCGAAGA GCAGACGGGTGACTTGTTCTTCGTCGAGAAGGGAGCCGATGGATTGTCCG TCGCGGAAGCTGCTACCGTCGATGGCCGCGGTTTGGGGACGATAACCCTC GCGCAAACACCTGCGCGTGCGCTCGGCGTGGGAACAGTCCGCGCGGATCG ACTTTTCGACCTCTCGCTGCTGATGGCATCGGCCGAACTCGTCGGCGTGA TGAATGCTGCCCTCGACATGACCGTCGAGTACTTGAAGACGCGGACGCAG TTCGGACGCCCGATCGGGAGCTTCCAGGCGCTACAACACAGGGCCGTCGA TGATTTCACACGCATCGTCAGCAGCCGCTCGTTGTTGTTCCAGGCGCTGG GGCAGGGCGACCGGGTGACCTCGGCGATGGCGGCTGCGGTCAAGTCGCAC GTTTCCGGCGAGGCTCTCATCGTCACCAAGTCGGCGATCCAGATGCACGG CGCGATCGGCTTCACCGACGACCACGATATCGGTCTCTACATGAAGCGGG CGATGTGGCTGTCGGCCAGTCTCGGCAATGCGGCTGTGCACCGGCGGCGC TATGCAGCCTTGTCGCCGTCAACGCCATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10229:865..1944-

>mRNA_P-wetherbeei_contig10229.1.1 ID=mRNA_P-wetherbeei_contig10229.1.1|Name=mRNA_P-wetherbeei_contig10229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1080bp|location=Sequence derived from alignment at P-wetherbeei_contig10229:865..1944- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCTGTTGTTGAGCGAGGAGCAGCGCCTGCTGCAGGACAGCGTTGC
AGGGACATTGACGGCACTGGGTGGCGTCAAGCGCGCGCGTGGGTTGCGTG
AGACAGGCGCGGGCTTCAGCCGCGACGTTCACCGGCAGTTGGCAGGCGAG
GGTTGGCTCGGCATTCTCGTGCCGCAGGAGGCGGGCGGGCTCGGGCTCGG
CTCCATCGAACTCGCGCTCGTGATGCAGGAAGCCGGTCGTCACCTCGCGC
CCGAGCCGGTTGCAACAGCCGCGCTTACGGCCATGGCATTGGCGGACTGC
AAATCGCCATGGGCTGCTTCGATCTGCGATGCAGCCGTTGCCGGCGATCT
CATCGTGGTCCCGGGATTTTCGGGGCATCGTTTGGGTGTGGCCGCACATA
CCGGCGTGACCGCCAGTGTTCAGCAGAAAGCGATGAGACTTTCCGGCGTG
GTCCGGGCCGTGTCGCACGCGGCGAGCGCGGATGGCTTTTTGATCGAAGA
GCAGACGGGTGACTTGTTCTTCGTCGAGAAGGGAGCCGATGGATTGTCCG
TCGCGGAAGCTGCTACCGTCGATGGCCGCGGTTTGGGGACGATAACCCTC
GCGCAAACACCTGCGCGTGCGCTCGGCGTGGGAACAGTCCGCGCGGATCG
ACTTTTCGACCTCTCGCTGCTGATGGCATCGGCCGAACTCGTCGGCGTGA
TGAATGCTGCCCTCGACATGACCGTCGAGTACTTGAAGACGCGGACGCAG
TTCGGACGCCCGATCGGGAGCTTCCAGGCGCTACAACACAGGGCCGTCGA
TGATTTCACACGCATCGTCAGCAGCCGCTCGTTGTTGTTCCAGGCGCTGG
GGCAGGGCGACCGGGTGACCTCGGCGATGGCGGCTGCGGTCAAGTCGCAC
GTTTCCGGCGAGGCTCTCATCGTCACCAAGTCGGCGATCCAGATGCACGG
CGCGATCGGCTTCACCGACGACCACGATATCGGTCTCTACATGAAGCGGG
CGATGTGGCTGTCGGCCAGTCTCGGCAATGCGGCTGTGCACCGGCGGCGC
TATGCAGCCTTGTCGCCGTCAACGCCATAG
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