mRNA_P-wetherbeei_contig10193.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10193.1.2
Unique NamemRNA_P-wetherbeei_contig10193.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: A0A836CJS3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS3_9STRA)

HSP 1 Score: 380 bits (975), Expect = 1.250e-125
Identity = 188/257 (73.15%), Postives = 217/257 (84.44%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLKALTVRCTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADINDSTHSI 771
            V AK R +VLLK +SGQ+ GGFWA MGPSGSGKSTLLNTLALR+D  V++ GD+RLNGR Y NA+LK MSGYVMQDDL N NLTCEETL YTA+LRCPQDA  A R+ RVD  L+Q+GLEHARHT VG+PL+KG+SGGERKRL VA ELL EP+LLFLDEPT+GLDSVTALSLC +L+ ++  CTVICTIHQPQSKIF LFDNLILLK+G I YQGP  ++LAFFE  GFPCP LTNPADHLLDS++   +DS+HS+
Sbjct:   64 VTAKTRKQVLLKGLSGQIKGGFWACMGPSGSGKSTLLNTLALRLDPAVSVVGDLRLNGRAYDNAQLKRMSGYVMQDDLFNGNLTCEETLTYTARLRCPQDANAAQRKVRVDGVLRQVGLEHARHTPVGTPLRKGISGGERKRLAVAQELLVEPQLLFLDEPTTGLDSVTALSLCHTLRKISDTCTVICTIHQPQSKIFALFDNLILLKSGDIAYQGPAKESLAFFEKTGFPCPPLTNPADHLLDSISLTRSDSSHSL 320          
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: A0A835YR02_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR02_9STRA)

HSP 1 Score: 379 bits (973), Expect = 1.010e-124
Identity = 196/290 (67.59%), Postives = 222/290 (76.55%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLKALTVRCTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPA--------------------------------LTNPADHLLDSMAADINDSTHSIM 774
            V AK RN+VLLK +SGQ+ GGFWA MGPSGSGKSTLLNTLALR+DR V++SGD+RLNGR Y NAELK MSGYVMQDDLLN NLTCEETL YTA+LRCPQD TDA R+ RVD  L+QMGLEHARHTIVG+PL+KG+SGGERKRL V LELL EP+LLFLDEPTSGLDSVTAL LC  L+ ++  CTV+CTIHQPQSKI++LFDNLILLKAG I YQGP  +ALAFFE  G+PCP                                 LTNPADHLLDS++    DS+HS+M
Sbjct:   66 VTAKARNQVLLKGISGQMRGGFWACMGPSGSGKSTLLNTLALRLDRAVSVSGDLRLNGRSYDNAELKRMSGYVMQDDLLNGNLTCEETLDYTARLRCPQDKTDAMRKVRVDRVLQQMGLEHARHTIVGTPLRKGISGGERKRLSVGLELLVEPKLLFLDEPTSGLDSVTALMLCNILREISETCTVVCTIHQPQSKIYSLFDNLILLKAGDIAYQGPAREALAFFEQTGYPCPXXXXXXXXXXXXDPRATHAAXXXXXXXXXXXXPLTNPADHLLDSISMTRTDSSHSLM 355          
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: A0A835ZBW7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW7_9STRA)

HSP 1 Score: 377 bits (968), Expect = 2.630e-124
Identity = 186/257 (72.37%), Postives = 217/257 (84.44%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLKALTVRCTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADINDSTHSI 771
            VVAK R ++LLK +SGQ+ GGFWA MGPSGSGKSTLLNTLALR+D GV ++GD+RLNGRP +NA+LK MSGYVMQDDL N NLTCEE L YTA+LRCPQD + A R+ RVD  L+Q+GLEHARHT VG+PLKKG+SGGERKRL VA ELL EP+LLFLDEPT+GLDSVTALSLC +L+ ++  C+VICTIHQPQSKIF LFDNLILLKAG I YQGP  QAL FFE+ G PCP LTNPADHLLD ++   ++S+HS+
Sbjct:   86 VVAKARKQLLLKGISGQIRGGFWACMGPSGSGKSTLLNTLALRLDPGVKVTGDLRLNGRPCSNAQLKRMSGYVMQDDLFNGNLTCEEQLTYTARLRCPQDTSAAQRKARVDGVLRQVGLEHARHTSVGTPLKKGISGGERKRLAVAQELLVEPQLLFLDEPTTGLDSVTALSLCHTLRKISDACSVICTIHQPQSKIFALFDNLILLKAGDIAYQGPAKQALPFFESTGHPCPPLTNPADHLLDVVSLTRSESSHSL 342          
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: D8TMA3_VOLCA (ABC transporter domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TMA3_VOLCA)

HSP 1 Score: 343 bits (881), Expect = 8.220e-112
Identity = 168/260 (64.62%), Postives = 208/260 (80.00%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLKALTVR--CTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADINDSTHSIM 774
            V A+ + R LL +V+G++  GF+A+MGPSGSGKSTLLN L+ R+DRGV++SG+++LNG+PY + ELKLMSGYVMQDDLLNA+LT EETL YTA+LR P+  T  +R  RV+  ++Q+GL H R  +VGSPLKKG+SGGERKRLCVA+ELLT+P+LLFLDEPTSGLDSVTALSLC  L+ L     CTV+CTIHQPQ+KIFNLFD L+LL  G IVYQGP   AL FF+ +GFPCPA  NPADH LD +   +NDS  S++
Sbjct:   43 VTARRQKRPLLNQVTGKITSGFYAIMGPSGSGKSTLLNALSCRLDRGVSMSGELKLNGQPYGSTELKLMSGYVMQDDLLNAHLTVEETLRYTAELRMPRTTTPEERMARVEEVMQQVGLSHVRSVVVGSPLKKGISGGERKRLCVAMELLTKPKLLFLDEPTSGLDSVTALSLCKLLRRLAASRTCTVVCTIHQPQAKIFNLFDQLLLLNRGTIVYQGPAQGALDFFDRSGFPCPAYENPADHFLDVITPSMNDSVESLV 302          
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: A0A8J4CN86_9CHLO (ABC transporter domain-containing protein n=8 Tax=Volvox TaxID=3066 RepID=A0A8J4CN86_9CHLO)

HSP 1 Score: 341 bits (874), Expect = 8.750e-111
Identity = 169/260 (65.00%), Postives = 207/260 (79.62%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLKALTVR--CTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADINDSTHSIM 774
            V A+   R LL  V+G++  GF+A+MGPSGSGKSTLLNTL+ R+DRGVT++G+++LNG+ Y+NAELKL+SGYVMQDDLLNA+LT EETL YTA+LR P+ +T  +R  RV+  ++Q+GL H R  IVGSP+KKG+SGGERKRLCVA+ELLT P+LLFLDEPTSGLDSVTALSLC  L+ L     CTV+CTIHQPQ+KIFNLFD L+LL  G IVYQGP   AL FF  +GFPCPA  NPADH LD +  ++NDS  S +
Sbjct:   40 VTARRHMRPLLNGVTGKITAGFYAIMGPSGSGKSTLLNTLSCRLDRGVTVAGELKLNGQLYSNAELKLLSGYVMQDDLLNAHLTVEETLRYTAELRMPRGSTPEERMARVEEVMQQVGLTHVRSVIVGSPIKKGISGGERKRLCVAMELLTRPKLLFLDEPTSGLDSVTALSLCRLLRRLATSRTCTVVCTIHQPQAKIFNLFDQLLLLNRGNIVYQGPAQGALEFFGRSGFPCPAFENPADHFLDVITPNMNDSVESFV 299          
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: A0A150GN10_GONPE (ABC transporter domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GN10_GONPE)

HSP 1 Score: 339 bits (870), Expect = 6.010e-110
Identity = 171/260 (65.77%), Postives = 206/260 (79.23%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLKAL--TVRCTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADINDSTHSIM 774
            V A+   R LL  V+G++VGGF+A+MGPSGSGKSTLLNTLA R+D GV+ISG+++LNG  Y+NAELK MSGYVMQDDLLNA+LT  ETL YTA+LR P+ +T  +R QRV   + Q+GL H R  IVGSP+KKG+SGGERKRLCVA+ELLT+P LLFLDEPTSGLDSVTALSLC  L+ L  +  CTV+CTIHQPQ+KIF LFD L+LL  G IVYQGP   AL FF+ +GFPCPA  NPADH LD +  ++NDS  S++
Sbjct:   57 VTARRAKRPLLNGVTGKIVGGFYAIMGPSGSGKSTLLNTLACRLDHGVSISGELKLNGNEYSNAELKKMSGYVMQDDLLNAHLTVHETLSYTAELRMPRTSTPEERAQRVQEVMGQVGLSHVRDVIVGSPMKKGISGGERKRLCVAMELLTKPALLFLDEPTSGLDSVTALSLCRLLRRLASSKTCTVVCTIHQPQAKIFALFDQLLLLNRGNIVYQGPAQGALDFFDRSGFPCPAYENPADHFLDVITPNMNDSVESLV 316          
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: A0A836C0Y5_9CHLO (ABC transporter domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C0Y5_9CHLO)

HSP 1 Score: 337 bits (864), Expect = 4.280e-109
Identity = 166/259 (64.09%), Postives = 205/259 (79.15%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLKALTVR--CTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADINDSTHSI 771
            V AK  +R LL  V+G++  GF+A+MGPSGSGK+TLLNTLA R+DRGV +SGD+RLNG  YTNAELK M+GYVMQDDLLNA+LT EETL YTA+LR P+  +  +R +R++ A+ Q+G+ H R  IVGSP++KG+SGGERKRLCVA+ELLT+P LLFLDEPTSGLDSVTALSLC  L+ L     CTV+CTIHQPQ+KIFNLFDNL+LL  G+IVYQGP   AL FF+ +GFPCP   NPADH+LD +   + +S   +
Sbjct:   57 VQAKAMSRPLLNSVTGKITSGFYAIMGPSGSGKTTLLNTLAFRLDRGVAVSGDLRLNGMEYTNAELKRMAGYVMQDDLLNAHLTVEETLRYTAELRMPRTTSPRERLERIEGAMSQVGISHVRDVIVGSPMQKGISGGERKRLCVAMELLTKPALLFLDEPTSGLDSVTALSLCRLLRRLASARACTVVCTIHQPQAKIFNLFDNLLLLNRGSIVYQGPAGGALDFFDRSGFPCPQHENPADHILDVITPTMTESMEDL 315          
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: A0A835WTF6_9CHLO (ABC transporter domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WTF6_9CHLO)

HSP 1 Score: 335 bits (858), Expect = 3.140e-108
Identity = 165/262 (62.98%), Postives = 206/262 (78.63%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLKALTVR--CTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADINDSTHSIMVR 780
            V ++   R LL  V+G +  GF+A+MGPSGSGKSTLLNTL+ R+DRGVT+ G+++LNG+ Y+NAELK +SGYVMQDDLLNA+LT EETL YTA+LR P+  T  +RQ+RV+  +  +GL H R  IVGSP+KKG+SGGERKRLCVA+ELLT+P+LLFLDEPTSGLDSVTALSLC  L+ L +   CTV+ TIHQPQ+KIFNLFD L+LL  G+IVYQGP   AL FF+ +GFPCP   NPADH LD +  + NDS  S++ +
Sbjct:   54 VTSRKVKRPLLNNVTGAITDGFYAIMGPSGSGKSTLLNTLSCRLDRGVTVEGELKLNGQEYSNAELKKLSGYVMQDDLLNAHLTVEETLRYTAELRMPRTTTPEERQERVETVMNSVGLSHVRDVIVGSPMKKGISGGERKRLCVAMELLTKPKLLFLDEPTSGLDSVTALSLCRLLRRLAMSRTCTVVTTIHQPQAKIFNLFDQLLLLNRGSIVYQGPAQDALDFFDRSGFPCPMHENPADHFLDVITPNHNDSVESLVAK 315          
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: A0A2J7ZUP2_9CHLO (ATP-binding cassette sub-family G member 2 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZUP2_9CHLO)

HSP 1 Score: 331 bits (848), Expect = 8.670e-107
Identity = 165/260 (63.46%), Postives = 206/260 (79.23%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLKALTV--RCTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADINDSTHSIM 774
            V A    R LL  V+G++  G++A+MGPSGSGKSTLLNTLALR+DR +++SG+++LNG+ Y+NAELK +SGYVMQDDLLNA+LT EETL YTA+LR P+  T  +R+ RV   ++Q+GL H    IVGSPL+KG+SGGERKRLCVA+ELLT+P LLFLDEPTSGLDSVTALSLC  LK L     CTV+CTIHQPQ+KIFNLFD+L+LL  G I+YQGP  QAL FF+ +GFPCP   NPADH +D +  ++NDS  S++
Sbjct:   49 VTATRIKRPLLNSVTGKITTGYYAIMGPSGSGKSTLLNTLALRLDRNMSVSGELKLNGQDYSNAELKKISGYVMQDDLLNAHLTVEETLGYTAELRMPRTTTVEERRARVKEVMEQVGLTHVSAVIVGSPLRKGISGGERKRLCVAMELLTKPLLLFLDEPTSGLDSVTALSLCKLLKRLATGRTCTVVCTIHQPQAKIFNLFDHLLLLNRGTIMYQGPAPQALGFFDRSGFPCPLHENPADHFMDVITPNMNDSVESLV 308          
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Match: A0A2K3DJM4_CHLRE (ABC transporter domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DJM4_CHLRE)

HSP 1 Score: 330 bits (846), Expect = 2.260e-106
Identity = 163/259 (62.93%), Postives = 204/259 (78.76%), Query Frame = 1
Query:    1 VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTISGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQDATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELLTEPRLLFLDEPTSGLDSVTALSLCMSLK--ALTVRCTVICTIHQPQSKIFNLFDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADINDSTHSI 771
            V ++   R LL  V+G +  GF+A+MGPSGSGKSTLLN LA R+D GV + G+++LNG+ Y++AELK +SGYVMQDDLLNA+LT EETL YTA+LR P+  T  +RQ+RV   ++Q+GL H R+ IVGSP+KKG+SGGERKRLCVA+ELLT P+LLFLDEPTSGLDSVTALSLC  L+  A+T  CTV+ TIHQPQ+KIF+LFD L+LL  G IVYQGP   AL FF+ +GFPCPA  NPA+H LD +  ++NDS  S+
Sbjct:   59 VTSRKTQRALLSNVAGAITDGFYAIMGPSGSGKSTLLNALACRLDHGVKLEGELKLNGQNYSHAELKKVSGYVMQDDLLNAHLTVEETLRYTAELRLPRTTTPEERQERVQTVMEQVGLAHVRNVIVGSPMKKGISGGERKRLCVAMELLTRPKLLFLDEPTSGLDSVTALSLCRLLRRLAMTRTCTVVTTIHQPQAKIFHLFDQLLLLNRGTIVYQGPAQDALDFFDRSGFPCPAHENPANHFLDVITPNLNDSVESL 317          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10193.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJS3_9STRA1.250e-12573.15P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835YR02_9STRA1.010e-12467.59P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835ZBW7_9STRA2.630e-12472.37P-loop containing nucleoside triphosphate hydrolas... [more]
D8TMA3_VOLCA8.220e-11264.62ABC transporter domain-containing protein n=1 Tax=... [more]
A0A8J4CN86_9CHLO8.750e-11165.00ABC transporter domain-containing protein n=8 Tax=... [more]
A0A150GN10_GONPE6.010e-11065.77ABC transporter domain-containing protein n=1 Tax=... [more]
A0A836C0Y5_9CHLO4.280e-10964.09ABC transporter domain-containing protein n=1 Tax=... [more]
A0A835WTF6_9CHLO3.140e-10862.98ABC transporter domain-containing protein n=3 Tax=... [more]
A0A2J7ZUP2_9CHLO8.670e-10763.46ATP-binding cassette sub-family G member 2 n=1 Tax... [more]
A0A2K3DJM4_CHLRE2.260e-10662.93ABC transporter domain-containing protein n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10193contigP-wetherbeei_contig10193:690..2304 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog3067.XP_002947559.1
PFAMsABC2_membrane,ABC_tran
Model size801
Max annot lvl3041|Chlorophyta
KEGG koko:K05681,ko:K21396
KEGG TC3.A.1.204
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.35e-112
EggNOG OGsCOG1131@1|root,KOG0061@2759|Eukaryota,37YH9@33090|Viridiplantae,34J9N@3041|Chlorophyta
DescriptionABC-2 type transporter
Cds size801
COG categoryQ
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185858.3159266-CDS-P-wetherbeei_contig10193:689..7901683185858.3159266-CDS-P-wetherbeei_contig10193:689..790Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10193 690..790 -
1683185858.324262-CDS-P-wetherbeei_contig10193:1097..12491683185858.324262-CDS-P-wetherbeei_contig10193:1097..1249Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10193 1098..1249 -
1683185858.3332422-CDS-P-wetherbeei_contig10193:1548..19591683185858.3332422-CDS-P-wetherbeei_contig10193:1548..1959Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10193 1549..1959 -
1683185858.3435614-CDS-P-wetherbeei_contig10193:2167..23041683185858.3435614-CDS-P-wetherbeei_contig10193:2167..2304Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10193 2168..2304 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10193.1.2prot_P-wetherbeei_contig10193.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10193 690..2304 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10193.1.2

>prot_P-wetherbeei_contig10193.1.2 ID=prot_P-wetherbeei_contig10193.1.2|Name=mRNA_P-wetherbeei_contig10193.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp
VVAKGRNRVLLKEVSGQVVGGFWAVMGPSGSGKSTLLNTLALRMDRGVTI
SGDMRLNGRPYTNAELKLMSGYVMQDDLLNANLTCEETLLYTAKLRCPQD
ATDADRQQRVDAALKQMGLEHARHTIVGSPLKKGVSGGERKRLCVALELL
TEPRLLFLDEPTSGLDSVTALSLCMSLKALTVRCTVICTIHQPQSKIFNL
FDNLILLKAGAIVYQGPTDQALAFFEANGFPCPALTNPADHLLDSMAADI
NDSTHSIMVRRLRRLRR
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mRNA from alignment at P-wetherbeei_contig10193:690..2304-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10193.1.2 ID=mRNA_P-wetherbeei_contig10193.1.2|Name=mRNA_P-wetherbeei_contig10193.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1615bp|location=Sequence derived from alignment at P-wetherbeei_contig10193:690..2304- (Phaeothamnion wetherbeei SAG_119_79)
GTCGTTGCAAAGGGCCGAAATCGCGTGCTCTTGAAGGAAGTGTCAGGTCA GGTTGTGGGAGGCTTTTGGGCCGTCATGGGGCCTTCCGGGTCGGGAAAAA GCACGCTGCTCAACACGCTAGCACTCCGAATGGACCGGTAAGAGAGAGTG TTTGGTTACTCGGTATTGGCTCCCCTTACCACCACAACGACGGCACTACA TTGGCCACTGCTTAAAAGGCGTTGGCACCGACTCAAATTTACCAAACCGC CTTCTTCCTCCTTCGCGGTCTCCCTTGTCCTCGCCCGTCACGTACGTTTG CCATTCAATCAACCAACTGCGCAACAATGGCAACAACATAAACAGGGGCG TGACCATTTCGGGCGACATGCGCCTCAACGGGCGGCCCTACACCAATGCC GAGCTCAAGCTTATGTCCGGCTACGTCATGCAAGACGACTTGCTCAACGC CAACCTGACGTGCGAAGAGACGCTGCTCTACACGGCGAAGCTGCGCTGCC CACAGGACGCAACCGACGCCGACCGGCAGCAGCGCGTCGACGCCGCGCTC AAGCAGATGGGGCTGGAACACGCGCGGCACACTATCGTCGGCTCCCCGCT CAAAAAGGGCGTGTCGGGCGGCGAGCGCAAGCGACTGTGCGTCGCGCTGG AGCTGCTGACGGAGCCCCGCTTGCTGTTTTTGGACGAGCCAACATCAGGG CTCGACTCGGTGACGGCGCTGTCGCTGTGCATGTCACTCAAGGCGCTGAC GGTGCGGTGAGTGAATCGACTCGGATACGGAGGTTTGAACAACCTTCCGT TTCACGGCCAACTGCTACCCTGGAGCCGGGGTTCCCTGGTTCATTTCAAT TTTCTGGTGCTGTGCAGAGCACACCGAGGGTAGCTGTCAGGCAAGCCGAC CAAGACAAACCGCGTGCCTTCAACGCGTCAGCTTGCTCTTCAAGCGGCTG ACTTCCCGATCATTGCGGGAAATCGACTGTTTTTCCACCCTCCGTTTCAC TGCTAACAAATTCTGAAACTTTTAACCTTCTCCTCCACTTACCTCTGTGC TGCAGCTGTACAGTAATTTGTACAATTCATCAACCGCAGAGCAAGATCTT CAACCTCTTCGATAACCTCATCCTGCTCAAGGCCGGCGCCATCGTCTATC AGGGGCCGACCGACCAGGCGCTCGCCTTCTTCGAGGCCAACGGCTTTCCC TGCCCAGGTCCGTATGTCCGTCTGTCCGTAATACCCCGCGTTTAGTTTCT GGTTTGGGCAAGTTTTCTGTTTTCTGTTTTCGAGTATGGGGCCATGCGGG CAACCTGCACCCGGTTGCGGCCATCAGCCCAGCGCAACAGCAGCCGCGGT GGTCGCACTCCCCGCCGCTGTGCGCGGGTCGGAATCGCCGCCCCCGCTGC CAGACAGCCGCTGCTAGCGAAGACACTCATGACCTTTTCCCGTCGACTGT TGTCCATTCGCTTACCACACCGTTTCTGCCGTCTCCTCTGTTCGAAAATG CATGGCAAAAACAGCACTGACTAACCCGGCGGACCATCTGCTGGACAGCA TGGCGGCAGACATAAATGATTCGACCCATTCGATCATGGTGAGGAGGCTG AGGAGGCTGAGGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10193:690..2304-

>mRNA_P-wetherbeei_contig10193.1.2 ID=mRNA_P-wetherbeei_contig10193.1.2|Name=mRNA_P-wetherbeei_contig10193.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig10193:690..2304- (Phaeothamnion wetherbeei SAG_119_79)
GTCGTTGCAAAGGGCCGAAATCGCGTGCTCTTGAAGGAAGTGTCAGGTCA
GGTTGTGGGAGGCTTTTGGGCCGTCATGGGGCCTTCCGGGTCGGGAAAAA
GCACGCTGCTCAACACGCTAGCACTCCGAATGGACCGGGGCGTGACCATT
TCGGGCGACATGCGCCTCAACGGGCGGCCCTACACCAATGCCGAGCTCAA
GCTTATGTCCGGCTACGTCATGCAAGACGACTTGCTCAACGCCAACCTGA
CGTGCGAAGAGACGCTGCTCTACACGGCGAAGCTGCGCTGCCCACAGGAC
GCAACCGACGCCGACCGGCAGCAGCGCGTCGACGCCGCGCTCAAGCAGAT
GGGGCTGGAACACGCGCGGCACACTATCGTCGGCTCCCCGCTCAAAAAGG
GCGTGTCGGGCGGCGAGCGCAAGCGACTGTGCGTCGCGCTGGAGCTGCTG
ACGGAGCCCCGCTTGCTGTTTTTGGACGAGCCAACATCAGGGCTCGACTC
GGTGACGGCGCTGTCGCTGTGCATGTCACTCAAGGCGCTGACGGTGCGCT
GTACAGTAATTTGTACAATTCATCAACCGCAGAGCAAGATCTTCAACCTC
TTCGATAACCTCATCCTGCTCAAGGCCGGCGCCATCGTCTATCAGGGGCC
GACCGACCAGGCGCTCGCCTTCTTCGAGGCCAACGGCTTTCCCTGCCCAG
CACTGACTAACCCGGCGGACCATCTGCTGGACAGCATGGCGGCAGACATA
AATGATTCGACCCATTCGATCATGGTGAGGAGGCTGAGGAGGCTGAGGAG
G
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