mRNA_P-wetherbeei_contig10181.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10181.1.1
Unique NamemRNA_P-wetherbeei_contig10181.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: A0A0G4IQX1_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IQX1_PLABS)

HSP 1 Score: 293 bits (749), Expect = 6.320e-95
Identity = 145/266 (54.51%), Postives = 186/266 (69.92%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFASAS---GFKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L   I V     YGF C+GLFA  D+  G +IW  +   E +  YTR QI A PQ E+  L+M+SYML DD + ST DPE D S++FNHSC PN WY  DE IVA RDIK GE + YDY+ TETE+S+H G+KC CGS QCR  L FS++RS  F+  + GH T +I RKH+EN W D RA+LRH+  G  LG+F   +    F+AGEK+LVFSGKVVH++QL+EPG++S R++E+SLQV +DLWQIPA K +GD  ET D++NH
Sbjct:    1 MLPDTIEVRPFDAYGFACRGLFAKVDMPAGALIWWHDKGTEPVDVYTRTQIEAHPQREK--LVMFSYMLGDDQFSSTADPESDPSFFFNHSCSPNTWYDTDERIVAMRDIKAGEQLVYDYSFTETEASLHSGMKCQCGSGQCRGVLTFSEWRSRAFVKRYHGHLTEYIWRKHSENSWYDPRAELRHRPDGA-LGMFCRTTPGMAFRAGEKILVFSGKVVHRDQLLEPGALSARDWEMSLQVHQDLWQIPAWKESGDKCETTDYVNH 263          
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: A0A485KN49_9STRA (Aste57867_9537 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN49_9STRA)

HSP 1 Score: 288 bits (737), Expect = 2.070e-93
Identity = 139/266 (52.26%), Postives = 190/266 (71.43%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFASASG---FKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L  ++ + A   YGF C+GLFA ED+A G  +W ++T+ E L  +TR +ILA   PE++ LI +SYM++DDC+ ST +PE D+ +YFNHSC+PNCW++GD  IV  R +K GE +CYDYA TETESS+H+G++C CG+A CR  L FS +RS  F+ +  GH T +I RKHAENGW D R +LR+K     +GLFA  +       G+ VL+FSGKV+HK+QL+E G+++ R++E+SLQV  DLWQIPA K TGD  ET D+INH
Sbjct:    1 MLPPQVKLEAFDMYGFDCRGLFAQEDLAAGTTVWLWDTATEPLVTFTRKEILA--HPEREKLINFSYMVNDDCFASTLEPEADACWYFNHSCDPNCWFEGDGKIVTLRPVKKGEQLCYDYACTETESSLHYGMQCRCGAAACRGLLKFSDWRSRGFLKKNLGHVTDYIMRKHAENGWYDTRMELRYKSKTS-MGLFARETSDCKILKGDIVLMFSGKVIHKDQLLERGAMTSRDFEMSLQVQRDLWQIPAWKETGDKCETSDYINH 263          
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: A0A024U8P3_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024U8P3_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.740e-87
Identity = 136/266 (51.13%), Postives = 182/266 (68.42%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFASASG---FKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L++ + V     YGF C GLFA ED+ +G ++W+    D +L  YT+A+ILA PQ E   LI YSYM  DD + ST +P  D S+YFNHSC+P CWY+GDE I   RD+K GE + YDY+ TETESSMH+GL+CLCG+A CR  L FS++RS  +  + +GH   ++  KH EN W D RA++R K G    G+FA        KAGE V+VFSGK+VH+ Q+ EPG++S+R+ E+SLQVA DLWQIP+ K +G+  +T DFINH
Sbjct:    1 MLTEVVQVKQFNDYGFECWGLFAKEDLPKGTLVWYAEGHD-VLDTYTKAEILAHPQRE--TLITYSYMRGDDKFCSTLNPSSDPSWYFNHSCDPTCWYEGDERITTCRDVKKGEQLAYDYSCTETESSMHYGLRCLCGTAACRGVLTFSEWRSRAYARKNKGHLNDYVWEKHTENSWYDPRAEVRTKSGDS-RGMFARIQKDALIKAGEIVVVFSGKIVHRNQVSEPGAISKRDLEMSLQVAPDLWQIPSWKESGEKYDTSDFINH 262          
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: A0A6G0X2H4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2H4_9STRA)

HSP 1 Score: 273 bits (697), Expect = 2.380e-87
Identity = 137/266 (51.50%), Postives = 184/266 (69.17%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFASASG---FKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L++ + V     YGF C GLFA EDI EG ++W+    D +L  YT+A+ILA PQ  +D+LI YSYM  DD + ST +P  D S+YFNHSC+P CWY+GDE I+ RR +K GE + YDY+ TETESSMH+GL+CLCGSA CR  L FS++RS  ++   +GH   +I +KH+E+ W D R ++R K G    GLFA        KA E V+VFSGKV+H++QL E G+ S+R++E+SLQVA  LWQIP+ K +G+  +T DFINH
Sbjct:    1 MLTEVVDVKKFNDYGFECMGLFAKEDIPEGTLVWYAEGHD-ILDCYTKAEILAHPQ--KDMLITYSYMRGDDRFCSTLNPSSDPSWYFNHSCDPTCWYEGDERIITRRAVKKGEQLTYDYSCTETESSMHYGLRCLCGSANCRGTLTFSEWRSRAYVRANKGHLNDYIWQKHSEHSWYDPRTEVRSKAGSS-RGLFARIQKDAVIKANEIVVVFSGKVIHRDQLAEAGAFSKRDFEMSLQVAPHLWQIPSWKESGEQYDTSDFINH 262          
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: A0A485KN15_9STRA (Aste57867_9368 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN15_9STRA)

HSP 1 Score: 273 bits (697), Expect = 2.530e-87
Identity = 133/266 (50.00%), Postives = 185/266 (69.55%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFASASG---FKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L++ + V     YGF C GLFA +D+ +G ++W+    D L++ YT+A+ILA PQ  +D LI YSYM  DD + ST  PE D S+YFNHSC+P CWY+GDE I   RD+K GE + YDY+ TETESSMH+GL CLC +A CR  L FS++RS  F+ + +GH    + +KH+EN W D R ++R K GG   GLFA        +AG+ V+VFSGK+VH++Q+ EPG++S+R++E+SLQVA  LWQIP+ K +G+  +T D+INH
Sbjct:    1 MLTEDVEVKKFHDYGFECWGLFAKQDLPKGTLVWYAQDEDVLIK-YTKAEILAHPQ--KDTLITYSYMRGDDQFCSTLHPETDPSWYFNHSCDPTCWYEGDEKITTCRDVKKGEQLAYDYSCTETESSMHYGLNCLCRTAACRGVLTFSEWRSRAFVRKNKGHLNEHVWKKHSENSWYDARTEVRLKSGGS-KGLFARVQKDAVIRAGDIVVVFSGKIVHRDQMSEPGAISKRDFEMSLQVAPHLWQIPSWKESGEKCDTSDYINH 262          
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: T0QXD7_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QXD7_SAPDV)

HSP 1 Score: 271 bits (694), Expect = 6.560e-87
Identity = 132/266 (49.62%), Postives = 180/266 (67.67%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFASASG---FKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L + + + A   YGF CKGLFAT D+     +W ++ + E L  +TR +I+A    +++ L+ +SYM+ DD + +T  PE D ++YFNH+C+PNCW++GD  IV RR +K+GE +CYDYA TETESS+H G+ C CGS +CR  L F  +RS  F+    GH T FI +KHAEN W D R +LRHK     LGLF         +AGE VLVFSGKV+HK+Q +E G+++ R++E+SLQV +DLWQIPA K TGD  ET D+INH
Sbjct:    1 MLPETVELRAFQFYGFACKGLFATADLPANTPVWTWDKATEPLETWTRHEIMA--HADREKLVNFSYMVGDDAFATTLAPERDPTWYFNHACDPNCWFEGDGQIVTRRPVKMGEQLCYDYACTETESSLHAGMTCQCGSDKCRGTLKFDDWRSRAFIKANYGHVTDFIMKKHAENSWYDSRMELRHKSKSS-LGLFCREDADCKIQAGEIVLVFSGKVIHKDQFLESGAMTARDFEMSLQVHKDLWQIPAWKETGDKIETSDYINH 263          
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: W4FEK5_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FEK5_9STRA)

HSP 1 Score: 271 bits (693), Expect = 9.290e-87
Identity = 132/266 (49.62%), Postives = 181/266 (68.05%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFA---SASGFKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L  ++ + A   YGF C GLFA ED+     +W ++T  E L  +TR ++++   P++  LI +SYM++DDC+ +T  PEED+ +YFNHSC+PNCW++GD  IV RR +K GE +CYDYA TETESS+H  + C CG+  CR +L F+ +RS  FM +  GH T +I RKHAENGW D R +LR+K     +GLF    S      GE VL+FSGK+VHK+ L+E G+++ R++E+SLQV  DLWQIPA K TGD  ET D+INH
Sbjct:    1 MLPPQVQLEAFQFYGFECHGLFAQEDLPVNTPVWVWDTVTEPLVTFTRKEVMS--HPDRQKLINFSYMVNDDCFATTTAPEEDACWYFNHSCDPNCWFEGDGKIVTRRAVKKGEQLCYDYACTETESSLHVDMNCRCGAETCRGQLKFNDWRSRGFMKKNLGHVTDYIMRKHAENGWYDTRMELRYKSKSS-MGLFCREVSDCKILKGEIVLMFSGKIVHKDTLLERGAMTPRDFEMSLQVQRDLWQIPAWKETGDKIETSDYINH 263          
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: A0A067BML2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BML2_SAPPC)

HSP 1 Score: 270 bits (690), Expect = 2.400e-86
Identity = 134/266 (50.38%), Postives = 186/266 (69.92%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFASA---SGFKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L++ + V     YGF C GLFA ED+ +G +IW+    D ++  YT+A+ILA PQ  +D LI YSYM  DD +G+T +P  D S+YFNHSC+P  WY+GDE I   RD+K GE + YDYA TETESSMH+GL+CLCG+A CR  L FS++RS +F+ + R H    + +KH+EN W D RA++R K G   +GLFA     +  K GE + VFSGK+VH++ ++EPG+VS+R++E+SLQVA  LWQIP+ K +G+  +T D+INH
Sbjct:    1 MLTEVVDVKKFHDYGFECMGLFAKEDLPKGTLIWYSQDID-VVDIYTKAEILAHPQ--KDTLITYSYMRGDDKFGTTLNPSSDPSWYFNHSCDPTTWYEGDERITTCRDVKKGEQLTYDYACTETESSMHYGLQCLCGTAACRGVLTFSEWRSRKFIKKNRDHLNDHVWKKHSENSWYDPRAEVRAKSGDA-MGLFARLHKDAVIKKGEIICVFSGKIVHRDHILEPGAVSKRDFEMSLQVAPTLWQIPSWKESGEKCDTSDYINH 262          
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: A0A1V9ZHX4_9STRA (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZHX4_9STRA)

HSP 1 Score: 282 bits (721), Expect = 4.290e-86
Identity = 137/266 (51.50%), Postives = 185/266 (69.55%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFA---SASGFKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L + + + A   YGF C+G+FA ED+ E  V+W ++T+ E L  +TRA I++   PE++ L  +SYM+ DD + ST +PE D  +YFNH+C+PNCW++GD  +V RR +K GE +CYDYA TETESS+H G+ C CGS +CR +L F ++RS  F+    GH T FI +KHAEN W D R +LRHK     LGLF    S    +AGE VLVFSGKVVHK+Q +E G+++ R++E+SLQV +DLWQIPA K TGD  ET D+INH
Sbjct:    1 MLPETVELRAFQFYGFECRGIFAVEDLPENAVVWTWDTATEPLETFTRAAIVS--HPEREKLANFSYMVGDDAFASTLEPERDPCWYFNHACDPNCWFEGDGQLVTRRAVKKGEQLCYDYACTETESSLHAGMICQCGSEKCRGKLTFGEWRSRAFIKANYGHVTDFIMKKHAENSWYDSRMELRHKSATS-LGLFCREDSDCKIQAGETVLVFSGKVVHKDQFLESGAMTARDFEMSLQVHKDLWQIPAWKETGDKIETSDYINH 263          
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Match: A0A6G0XAD9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAD9_9STRA)

HSP 1 Score: 269 bits (687), Expect = 7.720e-86
Identity = 128/266 (48.12%), Postives = 183/266 (68.80%), Query Frame = 1
Query:    4 VLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRAQILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYKGDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFSQYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFA---SASGFKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVKRTGDTKETGDFINH 792
            +L  ++ + +   YGF C GLFA ED+    V+W ++ + E L  +TR +I+    PE++ L+ +SYM++DDC+ ST +PE D  +YFNHSC+PNCW++GD+ IV RR +  GE +CYDYA TETESS+H+G++C CG+  CR +L F+ +RS  F+ +  GH T +I RKHAENGW D R +LR+K     +GLF    S      G+ VL+FSGK++HK+ L+E  +++ R++E+SLQV  DLWQIPA K TGD  ET D+INH
Sbjct:    1 MLPPQVKLDSFDLYGFKCHGLFAQEDLDANTVVWIWDRATEPLVTFTRKEIM--DHPEREKLVNFSYMVNDDCFASTTEPEADPCWYFNHSCDPNCWFEGDDKIVTRRPVLKGEQLCYDYACTETESSLHYGMECRCGADTCRGQLKFTDWRSRGFIKKNLGHVTDYIMRKHAENGWYDTRMELRYKSKTS-MGLFCREESDCKILKGDIVLMFSGKIIHKDHLLERNAMTPRDFEMSLQVHRDLWQIPAWKETGDKCETSDYINH 263          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10181.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G4IQX1_PLABS6.320e-9554.51Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A485KN49_9STRA2.070e-9352.26Aste57867_9537 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024U8P3_9STRA1.740e-8751.13Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A6G0X2H4_9STRA2.380e-8751.50Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KN15_9STRA2.530e-8750.00Aste57867_9368 protein n=1 Tax=Aphanomyces stellat... [more]
T0QXD7_SAPDV6.560e-8749.62Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
W4FEK5_9STRA9.290e-8749.62Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A067BML2_SAPPC2.400e-8650.38Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
A0A1V9ZHX4_9STRA4.290e-8651.50Lipid IV(A) 3-deoxy-D-manno-octulosonic acid trans... [more]
A0A6G0XAD9_9STRA7.720e-8648.12Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10181contigP-wetherbeei_contig10181:333..1812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog112098.XP_008614211.1
PFAMsSET
Model size798
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.44e-88
EggNOG OGs2E1RF@1|root,2S91I@2759|Eukaryota
DescriptionCysteine-rich motif following a subset of SET domains
Cds size798
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185857.8408897-CDS-P-wetherbeei_contig10181:332..5061683185857.8408897-CDS-P-wetherbeei_contig10181:332..506Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10181 333..506 -
1683185857.8517022-CDS-P-wetherbeei_contig10181:908..11281683185857.8517022-CDS-P-wetherbeei_contig10181:908..1128Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10181 909..1128 -
1683185857.8619251-CDS-P-wetherbeei_contig10181:1282..14291683185857.8619251-CDS-P-wetherbeei_contig10181:1282..1429Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10181 1283..1429 -
1683185857.8703156-CDS-P-wetherbeei_contig10181:1555..18121683185857.8703156-CDS-P-wetherbeei_contig10181:1555..1812Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10181 1556..1812 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10181.1.1prot_P-wetherbeei_contig10181.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10181 333..1812 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10181.1.1

>prot_P-wetherbeei_contig10181.1.1 ID=prot_P-wetherbeei_contig10181.1.1|Name=mRNA_P-wetherbeei_contig10181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
MVLSKKIHVVAHTKYGFPCKGLFATEDIAEGEVIWHFNTSDELLRQYTRA
QILAAPQPEQDVLIMYSYMLDDDCYGSTHDPEEDSSYYFNHSCEPNCWYK
GDENIVARRDIKVGEHVCYDYALTETESSMHFGLKCLCGSAQCRRELDFS
QYRSPRFMAEFRGHTTAFIARKHAENGWVDRRAQLRHKEGGGGLGLFASA
SGFKAGEKVLVFSGKVVHKEQLMEPGSVSQREYELSLQVAEDLWQIPAVK
RTGDTKETGDFINHW*
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mRNA from alignment at P-wetherbeei_contig10181:333..1812-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10181.1.1 ID=mRNA_P-wetherbeei_contig10181.1.1|Name=mRNA_P-wetherbeei_contig10181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1480bp|location=Sequence derived from alignment at P-wetherbeei_contig10181:333..1812- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTTCTGTCCAAGAAGATCCACGTCGTCGCCCATACGAAGTACGGGTT CCCGTGCAAGGGCCTCTTCGCGACCGAGGACATTGCCGAGGGGGAAGTGA TTTGGCATTTTAATACCTCCGATGAACTTTTGCGTCAATATACACGGGCC CAAATCCTCGCGGCGCCACAGCCGGAGCAGGACGTTCTCATTATGTACAG CTACATGCTCGACGACGACTGCTACGGGAGCACCCACGATCCCGAAGAGG ATTCAAGGTGCGGGCGGTTTCGCACCTCGTTGATCGGTTCCCCCGGTACT TAGTGCCGCCTCGCGGCGCTCGTACGCTGACGACCGCCTTTTTCTGTGCT TCCGAAACCTACTTTCTTTTCTCTGCGTTGCAGTTATTACTTCAACCACA GCTGCGAGCCTAATTGCTGGTACAAGGGGGACGAAAACATTGTGGCCCGC CGGGACATTAAGGTCGGCGAGCATGTCTGCTACGACTACGCCCTGACAGA GACGGAATCGTCCATGCACTTCGGCCTCAAGTAAGCTGTCCGTTAGAGCA AGCCGACATTAGCCCTTTTTGTTAAGAGATGACATCCACCACTCCCGACA CTATTTTCACTTCCTTAAAAGCGCCTCAGTTTTTCCTCATGCGGCGGTTA TTGCTTTCCTTTGTGTACCTACTTTCTCGGGCAGGTGCCTCTGCGGGAGT GCCCAATGCCGGCGGGAGCTCGACTTCTCGCAGTATCGCTCGCCGCGCTT CATGGCAGAGTTTCGGGGCCACACGACGGCATTCATCGCCCGAAAGCACG CCGAGAACGGCTGGGTCGACCGCCGCGCGCAGCTCCGCCACAAGGAGGGC GGCGGCGGCCTCGGTCTCTTCGCTAGCGCCAGCGGCTTCAAAGCCGGCGA GAAGGTGGGTCTGCTGGCGTGTGTGTGATGTCATATTTTTGGAGGATACA CAGGATGTTTACAATGGGTCGAAGTTCTACGGTGAAGTCTGAGTCAAAGG GAAGGGAAGGTCTGTTAGGCTTGAAGTTGGTTTTGGCAATGTTTTAAAGG AAAGATCGAGAACACCACAAAGCTCAGCGCTGCAGTCGGTGATAATGCCG CTCCGACCGCCACGGAAGTGAATGCGTCGCATTATTGCAGCAACGCTGCC ACCATCGCTTCGTTTTCATCGTCGTGTCCTCTCGCCTCCGATGCTCAACC TGTCTTTCCTCTAACCCCCTTCATTTCCATCCCCTTTTTTTTCCTTCTTC CATCGTTTGCCTTGGGTTGGGCGCTTTGCCTTGCCGCATTCAATCAAAAT CACCAGGTGCTGGTATTCAGCGGCAAGGTGGTGCACAAGGAGCAGCTGAT GGAGCCCGGCAGCGTGAGCCAGCGTGAATACGAGCTGTCGCTACAGGTTG CGGAGGACCTCTGGCAGATCCCCGCTGTCAAGCGCACCGGCGACACAAAG GAGACGGGCGACTTCATCAACCACTGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10181:333..1812-

>mRNA_P-wetherbeei_contig10181.1.1 ID=mRNA_P-wetherbeei_contig10181.1.1|Name=mRNA_P-wetherbeei_contig10181.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig10181:333..1812- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTTCTGTCCAAGAAGATCCACGTCGTCGCCCATACGAAGTACGGGTT
CCCGTGCAAGGGCCTCTTCGCGACCGAGGACATTGCCGAGGGGGAAGTGA
TTTGGCATTTTAATACCTCCGATGAACTTTTGCGTCAATATACACGGGCC
CAAATCCTCGCGGCGCCACAGCCGGAGCAGGACGTTCTCATTATGTACAG
CTACATGCTCGACGACGACTGCTACGGGAGCACCCACGATCCCGAAGAGG
ATTCAAGTTATTACTTCAACCACAGCTGCGAGCCTAATTGCTGGTACAAG
GGGGACGAAAACATTGTGGCCCGCCGGGACATTAAGGTCGGCGAGCATGT
CTGCTACGACTACGCCCTGACAGAGACGGAATCGTCCATGCACTTCGGCC
TCAAGTGCCTCTGCGGGAGTGCCCAATGCCGGCGGGAGCTCGACTTCTCG
CAGTATCGCTCGCCGCGCTTCATGGCAGAGTTTCGGGGCCACACGACGGC
ATTCATCGCCCGAAAGCACGCCGAGAACGGCTGGGTCGACCGCCGCGCGC
AGCTCCGCCACAAGGAGGGCGGCGGCGGCCTCGGTCTCTTCGCTAGCGCC
AGCGGCTTCAAAGCCGGCGAGAAGGTGCTGGTATTCAGCGGCAAGGTGGT
GCACAAGGAGCAGCTGATGGAGCCCGGCAGCGTGAGCCAGCGTGAATACG
AGCTGTCGCTACAGGTTGCGGAGGACCTCTGGCAGATCCCCGCTGTCAAG
CGCACCGGCGACACAAAGGAGACGGGCGACTTCATCAACCACTGGTGA
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