mRNA_P-wetherbeei_contig10180.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A3C0TW67_9PROT (RNA-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TW67_9PROT) HSP 1 Score: 238 bits (607), Expect = 1.110e-76 Identity = 120/190 (63.16%), Postives = 149/190 (78.42%), Query Frame = 1 Query: 43 ENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQINLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPDIFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFR 612 E GP+RRC+A+GESLP ERLIRFV++PDG L PDLAA+LPGRG+W+ +NR L+KA++ K F+RAARRQI P D +I ALL RR + +LG ARKAG A+ GREKV+A AR G+IGVL+ ASD AEDG +KL RLA+A P + W + EL LAFGR+NVIHAAIA+GR+ADRF++EA RL GFR Sbjct: 19 ETGPVRRCVASGESLPVERLIRFVVAPDGALVPDLAADLPGRGVWLASNRKALEKALSVKAFARAARRQITAPEDFAVRIEALLARRGLDMLGFARKAGQAVCGREKVDALARGGRIGVLLCASDAAEDGKSKLQRLAQAASPGANMIDWFTSDELGLAFGRENVIHAAIAKGRMADRFLIEATRLAGFR 208
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A7L5BWN3_9RHOB (RNA-binding protein n=1 Tax=Pikeienuella piscinae TaxID=2748098 RepID=A0A7L5BWN3_9RHOB) HSP 1 Score: 199 bits (505), Expect = 2.920e-61 Identity = 109/195 (55.90%), Postives = 139/195 (71.28%), Query Frame = 1 Query: 40 DENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQINLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPD----IFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFR 612 +++GP RRCIATGES +RLIRFVL PDG LTPDLAA LPGRG+W+TA R ++ KAV + FSR R+ + P DL D++ ALL+ R ++ LGIARKAG+A+TG EKV A+ + G++G L+AASDGAEDG KL+ + A++ I V L EL LAFGRD+VIHAA+ QG DR + EA RL GFR Sbjct: 9 EKDGPERRCIATGESGGTDRLIRFVLDPDGRLTPDLAARLPGRGVWLTAKRTLVAKAVKKRLFSRGFRQPVEAPADLADRLEALLVTRLVEALGIARKAGLAVTGFEKVRARLKKGRVGALLAASDGAEDGRGKLIAVVTAIEKAGGGAIPIVDALRSEELGLAFGRDSVIHAALDQGGATDRVIREARRLDGFR 203
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A2M7GFN1_9PROT (YlxR domain-containing protein n=1 Tax=Rhodospirillales bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_66_15 TaxID=1974092 RepID=A0A2M7GFN1_9PROT) HSP 1 Score: 185 bits (470), Expect = 9.010e-56 Identity = 99/193 (51.30%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 34 DADENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQINLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPDIFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFR 612 DAD GP+RRCI TG+ P L+RFV+ PD + PDLAA LPGRG+W++A RDV++ A K F++AA+R++ +PPDL D+I A ++RR M LG+AR+AG + G EK A R+ + G+L+AA DG EDG +KL +A+ P + L AEL A GRD+V+HA +A GRLADR V E RLLGFR Sbjct: 18 DAD-GGPVRRCIVTGKKRPVAELLRFVVGPDDRIVPDLAAGLPGRGLWLSARRDVVNTASEKKLFAKAAKRKVIVPPDLADEIEAQMVRRCMDALGLARRAGQVVAGFEKANAWLRAARGGLLVAARDGGEDGKSKL----RALAPGLAQFTVLDAAELGRALGRDHVVHAVVAPGRLADRLVFEQNRLLGFR 205
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A6N7F6H2_9PROT (RNA-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F6H2_9PROT) HSP 1 Score: 183 bits (464), Expect = 5.030e-55 Identity = 98/194 (50.52%), Postives = 125/194 (64.43%), Query Frame = 1 Query: 31 RDADENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQINLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPDIFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFR 612 R D P RRCI T ES P RL+R V++PDG + PD+ LPGRG+W+ A RD++ A A FSRAAR + + DL D+I LLLRR + L+G+AR+AG A+TG EK A SG+ G L+AA+DGAEDG AKL +AV + V + EL AFGRD +HAA+A+G L DR + E GRL GFR Sbjct: 17 RRGDAESPERRCIVTRESAPRNRLVRCVVAPDGTVVPDIEGRLPGRGLWLRAERDIVGVACARNVFSRAARAPVRVADDLADRIEDLLLRRCLDLIGLARRAGEAVTGFEKTRAMVESGRAGALVAAADGAEDGRAKL----RAVARGLPLVELFTADELGAAFGRDRAVHAAVAKGGLLDRLLAETGRLAGFR 206
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A211YU39_9PROT (YlxR domain-containing protein n=8 Tax=Bacteria TaxID=2 RepID=A0A211YU39_9PROT) HSP 1 Score: 183 bits (465), Expect = 7.870e-55 Identity = 101/192 (52.60%), Postives = 128/192 (66.67%), Query Frame = 1 Query: 49 GPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQINLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPDIFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFRGKLN 624 GP RRCIATG P LIRFV+ PDG + PDLA LPGRG+WV+A R+ L +A A F++AAR+ + P DL D++ ALL R + L+G+AR+AG A+ G EKV A G+ VL+AASDGA DG AKL LA AV+P V S L +AF RD ++HAAIA+G LA+R V EA RL G RG+ + Sbjct: 19 GPERRCIATGTVRPKAELIRFVVGPDGQVVPDLAERLPGRGLWVSAEREALLRAQAKGLFAKAARQSVRAPDDLVDRVEALLHRSCIDLIGMARRAGQAVAGYEKVHAWLAEGRAAVLLAASDGAADGRAKLAALAAAVRPAPALVEIFSADALGMAFARDRMVHAAIARGGLAERLVAEAARLDGIRGRAD 210
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A6A8QI37_9PROT (RNA-binding protein n=1 Tax=Telmatospirillum sp. TaxID=2079197 RepID=A0A6A8QI37_9PROT) HSP 1 Score: 182 bits (463), Expect = 9.700e-55 Identity = 95/191 (49.74%), Postives = 133/191 (69.63%), Query Frame = 1 Query: 40 DENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQINLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPDIFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFR 612 +E GP RRCIA+G+ LP ERLIRFV+ PDG + PD+ A LPGRG+W++A+RD+++ A F++A RR++ +PPDL ++I ALLLRR + +G+AR+AG AI G EKV + ++G +L+AA+DGA DG K+ +A+ PD+ V G EL AFGRD +HA + GRLAD ++A RL GFR Sbjct: 30 EEKGPNRRCIASGQVLPVERLIRFVVGPDGNVVPDIEAVLPGRGLWLSASRDMVNTAATKNLFAKAFRRKVGVPPDLSERIEALLLRRCIDRIGLARRAGQAICGFEKVRGELKAGHGALLLAAADGAADGRDKI----RALAPDLPLVAVFRGEELGAAFGRDRAVHALLTVGRLADGLKVDAARLAGFR 216
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A2D9F5W2_9PROT (YlxR domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F5W2_9PROT) HSP 1 Score: 181 bits (458), Expect = 5.530e-54 Identity = 91/191 (47.64%), Postives = 130/191 (68.06%), Query Frame = 1 Query: 40 DENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQINLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPDIFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFR 612 ++ GP+RRCI +GE P E LIRFV+ PD + PDLA +LPGRG+W++A RDV++ A F++AA+R++++PP L D + A ++RR M LG+AR+AG + G EK +A R+ + G+L+AA DG+EDG +KL +A+ P + L EL A GRD+V+HA +A G LADR V E RL+GFR Sbjct: 19 EDAGPIRRCIVSGEKRPVEELIRFVVGPDDTVVPDLAGDLPGRGLWLSARRDVVNTASEKNLFAKAAKRKVSVPPGLADAVEAQMVRRCMDALGLARRAGQVVAGFEKTDAWLRTAQRGLLVAARDGSEDGKSKL----RALAPGLAQFTVLDAGELGRALGRDHVVHAGVASGGLADRLVFEQNRLMGFR 205
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A2E2MK23_9PROT (YlxR domain-containing protein n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E2MK23_9PROT) HSP 1 Score: 180 bits (456), Expect = 7.680e-54 Identity = 92/191 (48.17%), Postives = 128/191 (67.02%), Query Frame = 1 Query: 40 DENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQINLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPDIFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFR 612 ++ GP+RRC+ TG+ P L+RFV+ PD + PDL +LPGRGIW++A RDV++ A F++AA+R++ +PP L D I A ++RR M LG+AR+AG + G EK A R+ + G+L+AA DG+EDG +KL +A+ P + L AEL A GRD+V+HAA+A G LADR V E RLLGFR Sbjct: 7 EDGGPVRRCVVTGDKKPVPELLRFVVGPDDCIVPDLGGDLPGRGIWLSARRDVVNTACEKNHFAKAAKRKVTVPPRLADDIEAQMVRRCMDALGLARRAGKVVAGFEKTCAWLRTARRGLLVAARDGSEDGKSKL----RALAPGLAQFTVLDAAELGRALGRDHVVHAAVAPGGLADRLVFEQSRLLGFR 193
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A7V7DQ82_9PROT (RNA-binding protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7DQ82_9PROT) HSP 1 Score: 179 bits (455), Expect = 7.730e-54 Identity = 94/196 (47.96%), Postives = 134/196 (68.37%), Query Frame = 1 Query: 34 DADENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQINLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPDIFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFRGKL 621 D +++GP RRCI T P E ++RF +SPDG + PD+AA LPGRG+W++A+RDV++ A F++AARR++ + PDL D I LLL R + L+G+ R+AG A+ G EKV + ++G+ V++AASDGA D K+L LA+ + V L+ EL AFGRD+ +H +A GRLA+RF+ EAGRL GFR K+ Sbjct: 4 DQEDSGPCRRCIVTAVVRPVECMVRFGISPDGAVVPDVAARLPGRGLWLSADRDVVNTAARKGLFAKAARRRVEVQPDLADLIERLLLGRCIDLIGLGRRAGQAVAGFEKVRGELKAGRGRVVLAASDGAADSREKVLALARGLP----VVTELASRELGAAFGRDHAVHGLMAPGRLAERFLSEAGRLAGFRTKM 195
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Match: A0A317EGF4_9PROT (RNA-binding protein n=1 Tax=Zavarzinia aquatilis TaxID=2211142 RepID=A0A317EGF4_9PROT) HSP 1 Score: 181 bits (458), Expect = 8.720e-54 Identity = 100/196 (51.02%), Postives = 131/196 (66.84%), Query Frame = 1 Query: 40 DENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAAELPGRGIWVTANRDVLDKAVAGKGFSRAARRQ-----INLPPDLGDQIAALLLRRTMQLLGIARKAGVAITGREKVEAQARSGKIGVLIAASDGAEDGAAKLLRLAKAVKPDIFYVHWLSGAELSLAFGRDNVIHAAIAQGRLADRFVMEAGRLLGFR 612 D GP+RRCIATGE+L E +IR+V+ PDG L PDL A LPGRG W A RD +++AV K F++AA R + +P L D+I A+L RR M +LG+AR+AG G +K+E+Q+R G G+L+ ASDGA DG KL ++ A + L+ AELSLA GR+NVIHAA GRLA++F+ EA RL GFR Sbjct: 24 DGPGPIRRCIATGETLEREAMIRYVVGPDGTLVPDLKAILPGRGFWTCARRDAIERAVTRKIFAKAAARAGHEGPLTVPDGLADRIEAMLARRCMDILGLARRAGEVTAGFDKIESQSRKGPPGLLLGASDGAADGKRKLRSISAAA----MHSEILTSAELSLALGRENVIHAAFKPGRLAEQFLGEARRLAGFR 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10180.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10180.1.1 >prot_P-wetherbeei_contig10180.1.1 ID=prot_P-wetherbeei_contig10180.1.1|Name=mRNA_P-wetherbeei_contig10180.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=209bp MKTLPKKATRRDADENGPLRRCIATGESLPPERLIRFVLSPDGVLTPDLAback to top mRNA from alignment at P-wetherbeei_contig10180:1371..1997- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10180.1.1 ID=mRNA_P-wetherbeei_contig10180.1.1|Name=mRNA_P-wetherbeei_contig10180.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig10180:1371..1997- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10180:1371..1997- >mRNA_P-wetherbeei_contig10180.1.1 ID=mRNA_P-wetherbeei_contig10180.1.1|Name=mRNA_P-wetherbeei_contig10180.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig10180:1371..1997- (Phaeothamnion wetherbeei SAG_119_79)back to top |