mRNA_P-wetherbeei_contig10176.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: A0A835Z3B2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B2_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.670e-27 Identity = 50/78 (64.10%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTALKGVKSGRAPVPTDPFKG 234 RACTIYE RP FC V+ TF MYGV EEMD FCT CCREQITDVYGK S EM +FN A+ +K G P DPF G Sbjct: 78 RACTIYETRPSFCTVSPETFADMYGVDGEEMDSFCTHCCREQITDVYGKRSDEMHRFNAAISELKRGDELQPVDPFSG 155
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: A0A4D9CSB2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSB2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.280e-23 Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTALKGVKSGRAPVPTDPFKG 234 RACT++E+RP FCRV TF +MYGV EMD+FCT CCREQI DVYG S EM FN A+K +K+ ++ KG Sbjct: 16 RACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMRSFNMAIKHLKASAGDARSERSKG 93
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: W7TMW6_9STRA (Uncharacterized protein family UPF0153 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMW6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.770e-22 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTALKGVKSGRAPVPTDPFKG 234 RACT++E+RP FCRV TF +MYGV EMD+FCT CCREQI DVYG S EM+ FN A+K +K+ ++ KG Sbjct: 196 RACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSERSKG 273
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: D8LKL6_ECTSI (Fe-S-cluster oxidoreductase-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKL6_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 2.260e-20 Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTALKGVKSGRAPVP 216 RACT+Y +RP FCRV TF MYGV E+MD FC+ CC EQI+DVYG S E+ FN AL ++ G P P Sbjct: 185 RACTVYSDRPRFCRVETETFGSMYGVEPEDMDDFCSSCCNEQISDVYGAESKELRVFNEALAALERGERPKP 256
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: A0A7S3K3R1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3R1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.530e-20 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTALKGVK 195 R CTIY++RPDFC+V +F MYG+ +++D FCT CCRE I+DVYG S EM +FN ALK ++ Sbjct: 125 RLCTIYDDRPDFCKVEANSFQSMYGIHSDDLDNFCTSCCREHISDVYGLNSQEMRRFNGALKSLR 189
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: A0A8J7EIP6_9CYAN (YkgJ family cysteine cluster protein n=1 Tax=Nodosilinea sp. LEGE 06152 TaxID=2777966 RepID=A0A8J7EIP6_9CYAN) HSP 1 Score: 84.7 bits (208), Expect = 1.660e-19 Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTAL 183 R CTIY +RPDFCRVT TF M+GV +E+D F +CC+E I D+YG SPEM +FN A+ Sbjct: 54 RLCTIYPDRPDFCRVTFSTFETMFGVASDELDDFAIDCCQEHIADIYGDESPEMERFNQAV 114
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: A0A2T2W634_9CYAN (Fe-S cluster protein n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A2T2W634_9CYAN) HSP 1 Score: 84.3 bits (207), Expect = 2.350e-19 Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTALKG 189 R CTIY +RPDFCRVT TF M+GV +E+D F +CC+E I D+YG SPEM +F A+ G Sbjct: 54 RTCTIYPDRPDFCRVTFSTFETMFGVASDELDDFAIDCCQEHIADIYGDESPEMERFERAVGG 116
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: A0A5Q4EA80_9CYAN (YkgJ family cysteine cluster protein n=1 Tax=Leptolyngbya sp. DLM2.Bin27 TaxID=2480213 RepID=A0A5Q4EA80_9CYAN) HSP 1 Score: 84.3 bits (207), Expect = 2.350e-19 Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTAL 183 R CTIY +RP FCRVT TF M+G+ +++D F +CC+E I D+YG+ASPEM +FN A+ Sbjct: 54 RRCTIYPDRPSFCRVTLDTFEAMFGIEADQLDDFAIDCCQEHIADIYGEASPEMSRFNAAV 114
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: UPI0019F4FAC6 (YkgJ family cysteine cluster protein n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019F4FAC6) HSP 1 Score: 81.6 bits (200), Expect = 2.570e-18 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTAL 183 R CTIYE+RP FCRVT TF+ M+G+ +++ F +CCREQI DVYG S EM+KF+ A+ Sbjct: 54 RECTIYEKRPSFCRVTAETFHSMFGITAADLNDFAIDCCREQIEDVYGDRSLEMLKFDRAV 114
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Match: A0A6H2NI06_9CYAN (YkgJ family cysteine cluster protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A6H2NI06_9CYAN) HSP 1 Score: 80.5 bits (197), Expect = 7.730e-18 Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 1 RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKASPEMIKFNTAL 183 R CTIY++RPDFCRVT TF M+ + +++ F +CC+E I D+YG+ SPEM +FN A+ Sbjct: 54 RRCTIYDQRPDFCRVTATTFEAMFDIDPADLNEFAIDCCQEHIDDIYGEDSPEMQRFNQAV 114 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10176.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10176.2.1 >prot_P-wetherbeei_contig10176.2.1 ID=prot_P-wetherbeei_contig10176.2.1|Name=mRNA_P-wetherbeei_contig10176.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp RACTIYEERPDFCRVTQVTFNRMYGVGVEEMDRFCTECCREQITDVYGKAback to top mRNA from alignment at P-wetherbeei_contig10176:1755..2379- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10176.2.1 ID=mRNA_P-wetherbeei_contig10176.2.1|Name=mRNA_P-wetherbeei_contig10176.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=625bp|location=Sequence derived from alignment at P-wetherbeei_contig10176:1755..2379- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10176:1755..2379- >mRNA_P-wetherbeei_contig10176.2.1 ID=mRNA_P-wetherbeei_contig10176.2.1|Name=mRNA_P-wetherbeei_contig10176.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig10176:1755..2379- (Phaeothamnion wetherbeei SAG_119_79)back to top |