mRNA_P-wetherbeei_contig10167.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10167.1.2
Unique NamemRNA_P-wetherbeei_contig10167.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: D7G1X1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X1_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 5.240e-97
Identity = 188/321 (58.57%), Postives = 226/321 (70.40%), Query Frame = 1
Query:   52 SQSPWELSEADSAAMMAWTVLGIDLHPALTYHLRRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILRRRDAEAAAXXXXXXXXXXXG-------DDSGDGA-ALILCPTRELALQVTQHLTAVTKGTGVRVATRAAAVVAXXXXXXXXXXXAVNPTLPEGLVLTHVRALQEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLP-SPEVFIHRSGRTARAAAAGLALAVVSPADEAHYARICRVLG 987
            S+  WEL   ++A M  W  LG++LHPAL +HL R  F  PTP+QR VLPKAVL R D++GAAETGSGKTLA+GLP+L  IL RRDA AAA                   +   +G  AL+LCPTRELALQV  HL  V + TGV V   AAA  AXXXXXXXXX   + P LP  L L  +++LQ +KDV  YLFC  Y GRTL+FVN+IA ARRL+ALL AL +PA  LHAQMQQRQRL++LDRF    +A+LVATDVAARGLD+P V HVVHYD   S EVFIHR+GRTARA AAGL+L++V+P D+A++ + C VLG
Sbjct:  336 SERDWELGSEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAARLAEGEEADQXXXXXXXXEGLHEGLQALVLCPTRELALQVAAHLREVVRDTGVAVVEAAAAGPAXXXXXXXXXAAEL-PALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALSVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLG 655          
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: A0A6H5KFI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI4_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 4.490e-61
Identity = 188/568 (33.10%), Postives = 225/568 (39.61%), Query Frame = 1
Query:   52 SQSPWELSEADSAAMMAWTVLGIDLHPALTYHLRRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILRRRDAEAAAXXXXXXXXXXXGD-DSGDGA------------ALILCPTRELALQVTQHLTAVTKGTGV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVATR------------------------AAAVVAXXXXXXXXXXXAVNPTLPEGLVLTHVRALQEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLP-SPEVFIHRSGRTARAAAAGLALAVVSPADEAHYARICRVLG 987
            S+  WEL   ++A M  W  LG++LHPAL +HL R  F  PTP+QR VLPKAVL R D++GAAETGSGKTLA+GLP+L  IL RRDA A  XXXXXXX    G+ D  +G             AL+LCPTRELALQV  HL  V + TGV                                                                                                                                                                                                                          RV  R                        AAA              A  P LP  L L  +++LQ +KDV  YLFC  Y GRTL+FVN+IA ARRL+ALL AL +PA  LHAQMQQRQRL++LDRF    +A+LVATDVAARGLD+P V HVVHYD   S EVFIHR+GRTARA AAGL+L++V+P D+A++ + C VLG
Sbjct:  253 SERDWELGAEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAXXXXXXXXXSDEGGEADQREGEEKEREGLHEGLQALVLCPTRELALQVAAHLREVVRDTGVAVVAVVGGLAEVKQQRQLSRRPEVVVATPGRFWEMAGTHAHLSRLETLRHLVVDEADRMLERGHYPELSRLFSMLAKAEGRREGGDGGSSSKSRFEEKFPFDVSEGGEWSVPQEEEEEDSGEGGKMFDDAMDEXXXXXXXXXXXXXXXXASRVRSPPAETNRHDGRGFARQTYVFSATLTLGSSGRQQRKKGGAXXXXXKGKGKRGEGDDDAVKNIMDRVGVRGDPAVIDMGRRTVGGGGGAETGQDAAAAGPAVVDGGAGAGAADLPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLG 820          
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: A0A059LKR6_9CHLO (DEAD/DEAH box helicase (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LKR6_9CHLO)

HSP 1 Score: 202 bits (514), Expect = 1.200e-55
Identity = 147/368 (39.95%), Postives = 185/368 (50.27%), Query Frame = 1
Query:   94 MMAWTVLGIDLHPALTYHLRRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILRRRDAEAAAXXXXXXXXXXXGDDSGDGA--------ALILCPTRELALQVTQHLTAVTKGTGVRVA---------------TRAAAVVAXXXXXXXXXXXAVNPTLPEGLVLTHVRAL-----------------------------------------------QEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLPSP-EVFIHRSGRTARAAAAGLALAVVSPADEAHYARICRVL 984
            M +W + G+   P L+  L  L F  PTP+Q  V+  AV    DVLGAA+TGSGKTLA+GLPI++ +LR R  EA               + G  A        ALI+ PTRELALQV QHL  V +  G+RV                 +   +V            A  P       L  +RAL                                               +E +DV  Y   +Q+ GRTLVFVN+IA ARRLTA+L  L LP  ALHA+ QQRQRL+ LDRFR+S +A+LVATDVAARGLD+P V  VVHY LP+  + ++HRSGRTARA   GLA+A+V P + A Y  + R L
Sbjct:  172 MDSWRIYGLS-EPVLSA-LGALGFEEPTPIQAAVVEAAVRDGRDVLGAAQTGSGKTLAFGLPIIERLLRERRLEAR--------------EEGGAAPARRRCLKALIVAPTRELALQVQQHLERVARPCGLRVVPVVGGLAIQKQERQLVKRPEIVVGTPGRLWEVMQASGPAASHLCSLGGLRALVIDEADSMVMPGRFVELKSIVDRPLVVDLTPERQVASGVAEASLQCTEESRDVQLYCLLQQHPGRTLVFVNAIAAARRLTAILKILGLPVQALHAEQQQRQRLKALDRFRDSEQAVLVATDVAARGLDIPGVACVVHYQLPATLDSYVHRSGRTARAEKEGLAVAMVMPKEAARYQALLRAL 523          
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: A0A397DIS4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DIS4_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.330e-52
Identity = 130/346 (37.57%), Postives = 176/346 (50.87%), Query Frame = 1
Query:   88 AAMMAWTVLGIDLHPALTYHLRRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILRRRDAEAAAXXXXXXXXXXXGDDSGDGAALILCPTRELALQVTQHLTAV-------------------------TKGTGVRVAT---------------------------------------RAAAVVAXXXXXXXXXXXAVNPTLPEGLVLTHVRALQEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLP-SPEVFIHRSGRTARAAAAGLAL 930
            A + AW+     LHP L   L R++F APT +Q L L  A++ + DV+GAA TGSGKTLA+GLP+LQ +L+    E                  G   ALIL PTRELA+Q+  HL A+                         + G  + VAT                                         A   +               TLP+GL L  V  L E ++ + Y F  QY GRT+VF+N+I+G R+L  +L  L++P  ALHA+MQQ+QRL+ LD+FR   + IL+ATDVAARGLD+P+V++VVHY +P S E F+HRSGRTARA+  GL++
Sbjct:  200 AVLPAWSKF--KLHPTLNASLTRMAFTAPTLIQALTLTPAMIEQRDVVGAAPTGSGKTLAFGLPVLQYLLKSSSNEPR----------------GKCRALILTPTRELAIQIVSHLQALIPDKRRIGIVSLVGGMAIQKQQRQLSYGPEIVVATPGRLWETKNPTALTMLESIMKRIGLRGKPAVVDLSAKESNTATKSSTTDAPAKVPRGGAEVTLPDGLELAQVECLDEHRNNVLYYFLTQYPGRTIVFLNAISGVRKLAGVLHLLKMPVFALHAEMQQKQRLKKLDQFRAHEKGILIATDVAARGLDIPSVDYVVHYHIPRSAETFVHRSGRTARASKHGLSI 527          
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: A0A2U1JB49_SMIAN (Uncharacterized protein n=1 Tax=Smittium angustum TaxID=133377 RepID=A0A2U1JB49_SMIAN)

HSP 1 Score: 189 bits (481), Expect = 4.190e-51
Identity = 124/342 (36.26%), Postives = 176/342 (51.46%), Query Frame = 1
Query:  103 WTVLGIDLHPALTYHLRRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILRRRDAEAAAXXXXXXXXXXXGDDSGDGAALILCPTRELALQVTQHLTAVTKGTGVRVATRAAAVVAXXXXXXXXXXXAVNPTL------------------------------------------PEGLVLTHVR-----ALQEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLP-SPEVFIHRSGRTARAAAAGLALAVVSPADEAHYARICRVL 984
            WT LGI  H  L   L    F  PT +Q   +P A+  R DVLGAA+TGSGKTLA+GLPI Q I++ + A                D  G+ +A+IL PTRELA+QV  HL  ++K   + + +    +V              +P +                                          P+G +   +       LQ DK+   Y F  ++ G+TLVFVNSI+  RRL  +L  L++    LHAQMQQRQRL+NLDRF+ +   +L+++DVAARGLD+P V+HV+HY +P   E+++HRSGRTAR    G+ +  V P + ++Y R+C+ L
Sbjct:  253 WTNLGI--HHLLLKGLGDCGFTDPTEIQERAIPVALKGR-DVLGAAQTGSGKTLAFGLPICQKIVKLKSANT--------------DSRGELSAIILVPTRELAIQVKDHLVNISKHQKINIVS----IVGGMSLQKQERLIKQSPDILVATPGRLWEIVEQTDLLSQKLNKIQFLVLDEADRMLEQDITPKGSISDQISEARIDCLQPDKETYLYYFLTRFTGKTLVFVNSISLVRRLIPILTNLKIQVYPLHAQMQQRQRLKNLDRFKSAKNGVLISSDVAARGLDIPLVDHVIHYQVPRGGELYVHRSGRTARGHNEGVVVVFVCPEERSNYMRLCKTL 573          
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: A0A8H3BZJ7_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3BZJ7_9AGAM)

HSP 1 Score: 180 bits (457), Expect = 8.980e-51
Identity = 117/291 (40.21%), Postives = 153/291 (52.58%), Query Frame = 1
Query:   76 EADSAAMMAWTVLGIDLHPALTYHLRRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILRRRDAEAAAXXXXXXXXXXXGDDSGDGAALILCPTRELALQVTQHLTAVTKGTGVRVATRAAAVVAXXXXXXXXXXXAVNPTLPEGLVLTHVRALQEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLP-SPEVFIHRSGRTARAAAAGLALAVVSP 945
            E D + +  W+   I LHP + + L  LSF  PTP+Q+  LP A   R D++G AETGSGKTLAY LPILQ IL +                         AALIL PTRELALQ                                                          D   Y F  +Y GR+LVFV+SI G RRLT ++  L+L A  LH+Q+QQRQRL+NLDRF+ +  A+L+ATDVAARGLD+P+V+HV+HY LP + + ++HR+GRTARA   G +L +++P
Sbjct:   71 EFDQSLLPEWS--SIPLHPVILHSLLALSFTKPTPIQKAALPIAQAGR-DIVGVAETGSGKTLAYSLPILQHILSKPATNKTL------------------AALILAPTRELALQ----------------------------------------------------------DFYLYYFLLRYPGRSLVFVSSIDGIRRLTPIMELLQLKAFPLHSQLQQRQRLKNLDRFKSTPSAVLIATDVAARGLDIPSVDHVIHYQLPRTADAYVHRNGRTARAQREGFSLLLIAP 282          
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: A0A2T9YD14_9FUNG (Exocyst complex component Sec8 n=1 Tax=Furculomyces boomerangus TaxID=61424 RepID=A0A2T9YD14_9FUNG)

HSP 1 Score: 189 bits (481), Expect = 3.150e-50
Identity = 124/342 (36.26%), Postives = 176/342 (51.46%), Query Frame = 1
Query:  103 WTVLGIDLHPALTYHLRRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILRRRDAEAAAXXXXXXXXXXXGDDSGDGAALILCPTRELALQVTQHLTAVTKGTGVRVATRAAAVVAXXXXXXXXXXXAVNPTL------------------------------------------PEGLVLTHVR-----ALQEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLP-SPEVFIHRSGRTARAAAAGLALAVVSPADEAHYARICRVL 984
            WT LGI  H  L   L    F  PT +Q   +P A+  R DVLGAA+TGSGKTLA+GLPI Q I++ + A                D  G+ +A+IL PTRELA+QV  HL  ++K   + + +    +V              +P +                                          P+G +   +       LQ DK+   Y F  ++ G+TLVFVNSI+  RRL  +L  L++    LHAQMQQRQRL+NLDRF+ +   +L+++DVAARGLD+P V+HV+HY +P   E+++HRSGRTAR    G+ +  V P + ++Y R+C+ L
Sbjct:  253 WTNLGI--HHLLLKGLGDCGFTDPTEIQERAIPVALKGR-DVLGAAQTGSGKTLAFGLPICQKIVKLKSANT--------------DSRGELSAIILVPTRELAIQVKDHLVNISKHQKINIVS----IVGGMSLQKQERLIKQSPDILVATPGRLWEIVEQTDLLSQKLNKIQFLVLDEADRMLEQDITPKGSISDQISEARIDCLQPDKETYLYYFLTRFTGKTLVFVNSISLVRRLIPILTNLKIQVYPLHAQMQQRQRLKNLDRFKSAKNGVLISSDVAARGLDIPLVDHVIHYQVPRGGELYVHRSGRTARGHNEGVVVVFVCPEERSNYMRLCKTL 573          
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: UPI000E6E23A4 (DEAD-box ATP-dependent RNA helicase 13 n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E23A4)

HSP 1 Score: 187 bits (476), Expect = 3.510e-50
Identity = 140/418 (33.49%), Postives = 190/418 (45.45%), Query Frame = 1
Query:   94 MMAWTVLGIDLHPALTYHLRRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILRRRDAEAAAXXXXXXXXXXXGDDSGDGAALILCPTRELALQVTQHLTAVTKGTGVRVATRAAAVVAXXXXXXXXXXX------------------------------AVNPT-------------------------------------------LPEGLVL----------------------------------TH------------VRALQEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLP-SPEVFIHRSGRTARAAAAGLALAVVSPADEAHYARICRVLG 987
            ++ W   G++L   +   L  L F+APTP+Q L LP A+L R D+LGAAETGSGKTLA+G+PI+  IL+ +    A             + S    ALIL PTRELA+QV  HL A+ K T +R+A     + A                                         A++ T                                           LP+ L+L                                  TH            +    E KD   Y   +++ GRTLVF NSI+  RRLT L   L+     LHA MQQRQRL+NL+RFR++A A+LV+TDVAARGLD+P V HV+HY +P S E ++HRSGRTARA+  G+ + ++ PA+  +YA++CR LG
Sbjct:  216 LIGWN--GLELSDEILQALCDLKFVAPTPIQALTLPPAILGRRDILGAAETGSGKTLAFGIPIIHGILKLKQKLNAVLHK---------NTSRPLYALILTPTRELAVQVKNHLVALAKHTDIRIAVILGGMAAVKQERILKYCPEIVVATPGRLWELIQEHNEHLSKVDSIRFLAIDETDRMVERGHFNELQLLLERINADESLARKRQNFVFSATLTLVHDLPKHLILKKKKGAKILNQTPGQKLQHLIQLLGINNPKIVDVTHETGMAKSLTECRISCAMEHKDYYLYYLLKRHPGRTLVFCNSISCVRRLTQLFTILQCNPLPLHASMQQRQRLKNLERFRDNADAVLVSTDVAARGLDIPDVQHVIHYQVPRSSENYVHRSGRTARASKQGITILLMEPAESKNYAKLCRTLG 622          
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: A8HPX8_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HPX8_CHLRE)

HSP 1 Score: 171 bits (433), Expect = 7.510e-46
Identity = 118/311 (37.94%), Postives = 160/311 (51.45%), Query Frame = 1
Query:   94 MMAWTVLGIDLHPALTYHLRRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILRRRDAEAAAXXXXXXXXXXXGDDSGDGAALILCPTRELALQVTQHLTAVTKGTGVRV------------ATRAAAVVAXXXXXXXXXXXAVNPTLPEGLVLTHVRALQEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLP-SPEVFIHRSGRTARAAAA-GLALAVVSPADEAHYARICRVL 984
            M AW     +L   +   L  L F  PTP+QR  L  A+ +R+D++GAA+TGSGKTLA+GLPIL                                             V  HL A+ +  GVRV            A + AA  A            +   L + L    +  L +++D + Y     + GRTLVF N+++  RRL ALL  L LP  ALHAQ QQRQRL+ LDRFR +   +LVATDVAARGLD+P V+ VVHY +P S + +IHR GRTAR  +  G+A+A+V+P + A ++ +CR+L
Sbjct:  128 MSAWEEF--ELAGGVLAGLAALGFANPTPIQRECLGPAIRARADIIGAAQTGSGKTLAFGLPILH--------------------------------------------VCSHLQAIGRPCGVRVLSIVGGISDVKQARQLAARPAVIVATPGRLWDLMCSRLADRLTEASISCLDDERDELLYYLLAAHPGRTLVFANAVSAVRRLGALLALLGLPVYALHAQQQQRQRLKALDRFRANPNGVLVATDVAARGLDIPNVSTVVHYQIPPSADTYIHRCGRTARGISCDGIAIALVTPREAARFSGLCRLL 392          
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Match: A0A836CDB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.020e-42
Identity = 88/151 (58.28%), Postives = 107/151 (70.86%), Query Frame = 1
Query:  538 PTLPEGLVLTHVRALQEDKDVMCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRLRNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLP-SPEVFIHRSGRTARAAAAGLALAVVSPADEAHYARICRVLG 987
            P LPEGL L   ++LQ DKD   YLF  Q+ GRTLVFVN++  ARR+  +L  LR+P A LHAQM QR RLR LD  R S R  ++ATDVAARGLDVP V+HVVHYD P S   F+HRSGRTARA   G AL++++P DEA +AR+   +G
Sbjct:  782 PALPEGLTLAQTKSLQADKDAWLYLFATQFPGRTLVFVNAVVMARRVAQVLQLLRIPCAPLHAQMAQRARLRALDFLRTSERCCVIATDVAARGLDVPHVDHVVHYDAPRSAADFVHRSGRTARAGRGGFALSIIAPRDEAAFARVFAAVG 932          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10167.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1X1_ECTSI5.240e-9758.57DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KFI4_9PHAE4.490e-6133.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A059LKR6_9CHLO1.200e-5539.95DEAD/DEAH box helicase (Fragment) n=1 Tax=Helicosp... [more]
A0A397DIS4_9STRA1.330e-5237.57Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A2U1JB49_SMIAN4.190e-5136.26Uncharacterized protein n=1 Tax=Smittium angustum ... [more]
A0A8H3BZJ7_9AGAM8.980e-5140.21Hypothetical protein n=1 Tax=Rhizoctonia solani Ta... [more]
A0A2T9YD14_9FUNG3.150e-5036.26Exocyst complex component Sec8 n=1 Tax=Furculomyce... [more]
UPI000E6E23A43.510e-5033.49DEAD-box ATP-dependent RNA helicase 13 n=1 Tax=Cte... [more]
A8HPX8_CHLRE7.510e-4637.94Predicted protein n=1 Tax=Chlamydomonas reinhardti... [more]
A0A836CDB6_9STRA2.020e-4258.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10167contigP-wetherbeei_contig10167:26..2384 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G1X1
PFAMsDEAD,Helicase_C
Model size987
Max annot lvl2759|Eukaryota
KEGG koko:K14805
Hectar predicted targeting categoryother localisation
Exons3
Evalue8.6e-98
EggNOG OGsCOG0513@1|root,KOG0347@2759|Eukaryota
EC3.6.4.13
Descriptionhelicase activity
Cds size987
COG categoryL
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185857.0823452-CDS-P-wetherbeei_contig10167:25..5381683185857.0823452-CDS-P-wetherbeei_contig10167:25..538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10167 26..538 -
1683185857.0908637-CDS-P-wetherbeei_contig10167:1763..18561683185857.0908637-CDS-P-wetherbeei_contig10167:1763..1856Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10167 1764..1856 -
1683185857.0982127-CDS-P-wetherbeei_contig10167:2003..23841683185857.0982127-CDS-P-wetherbeei_contig10167:2003..2384Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10167 2004..2384 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10167.1.2prot_P-wetherbeei_contig10167.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10167 26..2384 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10167.1.2

>prot_P-wetherbeei_contig10167.1.2 ID=prot_P-wetherbeei_contig10167.1.2|Name=mRNA_P-wetherbeei_contig10167.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=329bp
GEGDEADAAVAVPSSPSSQSPWELSEADSAAMMAWTVLGIDLHPALTYHL
RRLSFLAPTPVQRLVLPKAVLSRSDVLGAAETGSGKTLAYGLPILQSILR
RRDAEAAAALAVAVAGAAAGDDSGDGAALILCPTRELALQVTQHLTAVTK
GTGVRVATRAAAVVAVSASSAAAAVAAVNPTLPEGLVLTHVRALQEDKDV
MCYLFCEQYNGRTLVFVNSIAGARRLTALLVALRLPAAALHAQMQQRQRL
RNLDRFRESARAILVATDVAARGLDVPAVNHVVHYDLPSPEVFIHRSGRT
ARAAAAGLALAVVSPADEAHYARICRVLG
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mRNA from alignment at P-wetherbeei_contig10167:26..2384-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10167.1.2 ID=mRNA_P-wetherbeei_contig10167.1.2|Name=mRNA_P-wetherbeei_contig10167.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2359bp|location=Sequence derived from alignment at P-wetherbeei_contig10167:26..2384- (Phaeothamnion wetherbeei SAG_119_79)
GGGGAGGGCGACGAGGCCGATGCAGCTGTGGCAGTGCCCTCATCTCCGTC TTCCCAGTCTCCGTGGGAGCTCAGCGAGGCCGACTCGGCCGCCATGATGG CGTGGACGGTTCTCGGAATCGACCTGCACCCGGCATTGACGTACCACCTC CGGCGCCTCAGCTTCCTGGCGCCGACGCCAGTCCAGCGTCTCGTCCTACC CAAGGCCGTTCTGTCCCGGAGCGATGTTCTGGGCGCGGCTGAGACGGGGT CCGGCAAGACGCTCGCTTACGGGCTTCCCATCCTGCAGAGCATCCTCCGC CGCCGCGACGCAGAAGCGGCAGCTGCACTAGCAGTAGCGGTGGCGGGGGC AGCAGCAGGAGACGACAGTGGCGACGGTGCTGTCGCAAACAACGGCGGCG GCGGCAGCAGCTATGGCGGTGGCGGGGGCGGCAGCAGCTATGGCAGTGGC GGCGGCGGCGGCGGCGACGGCGGCGACGGCGTCGGCGGCGGCGGTGGCGG TGGCAGGAGTGGCGGGCGGACGCTGGAGGCGCTCATCCTCTGCCCGACGC GCGAGCTAGCGCTGCAGGTGACGCAGCACCTGACGGCCGTAACGAAAGGG ACCGGAGTCCGCGTGGCGACCGTCGTCGGCGGCCTGGCGGAGGTGAAGCA GGAGCGGCTGCTATCGCGGCGGCCCGAGGTGGTGGTGGCGACACCCGGGA GGCTCTGGGAGCTCGTCGGGACGCACAGCCACCTGCGGAACCTCAGCGGC CTCCGGTGAACCGTTTTCCCTTTTTTGCCTTTCTATTTCTACCCTTCTTT GCCCTCGCGTTGCCTTGCTTTGCCGTGCTTTGCCGTGCTTTGCCGTGCTT TGCCGTTCGGGGTTTTCTCTGCCTTTCCTGTTGCTGTTCTTGAGGACTGC GAGATTGTCGGCTTTACAACAACTGCTTTTCTGGTTATAGAGCTTGAAGG CAACGACTTCACGGAATGGACGGGGACGCCGATTCAGTGGCTAAAAATGT CCTTCTTGAGCTACTTGGACAGGCTCGAAGTGCATCTGTTATTGAAAGGG AAAGGGTGGGTTGCTAAGAAGTATTCATGTCTCGCGAGACCACCTTTGAA TACTGTGGCTGTCTTGTGCCGGTGTTGTACCAATGCTTAAATAACCTTTA CCGGCCTCTGCGTGCAGGTTTCTGGTGGTCGACGAGGCGGACCGCATGGT GGAGAAGGGCCGCTACGCTGAGCTGCAAAAGCTCTTTGACCTGCTAGGCC GGCAGCAGCGGGGAACAACCGGCAGCGGCAGCGGCCTCTGTGGCAGCGGC CTCGGTGGCAGCGGCGGCGGCGGCAAGGGCAAGCGCAAAGGCGGCGATGG CGGCGGCAGGGGAAAACGCGGACGCAAGCGCGGGGCCACGGGTAAAGATG ACGGCATTCCGCAACCGTGGGTCGACGACTATGAAGCGGCGAACGCCGAC GACGCTGACGCTGACGGCAGCGGTAGCGGCGGCGAGCTGCTCGGTCCCGG TGATGGCGAGGGGGGAGGCGACATAGGCAACGACAGCGGAACAGCGGTGG CATCCGCGAAGGCGATGGTGACAGCGCCTGCTGTGCAGCGGCAGACTTTT GTCTTTTCGGCAACGCTGACACTGGGAGCAGGGCGCCAGCCAAAAAAGTG CCGTGGAAGCAGCGGCAGCGCATCGGATGGCGCAGGAAAGGCGCAGCTGG ATCCGCTGAGCGCGATCCTGGACCGCGTCGGCACGGGCAACAAGCGCGCC GTCATCGACCTGACCTCGAAGCCGGCCTGGCCCGGCGTTGCAGCCGCCGG AGCTGCGGTTTCCTCCGCCGACGGCAATGCTGCATCAGCGGCGAAGCGGG CGGCGGCAGTGGTGGCAGTATCCGCGTCTTCGGCGGCGGCGGCAGTGGCG GCGGTGAATCCAACGCTGCCGGAAGGTCTCGTGCTGACGCACGTGCGGGC ACTGCAGGAGGACAAGGACGTCATGTGCTACCTCTTTTGCGAGCAGTACA ACGGGCGGACCCTCGTCTTCGTCAACTCGATCGCTGGCGCCCGCCGCCTG ACGGCGTTGCTAGTGGCGCTGCGCCTGCCGGCGGCGGCCCTCCACGCGCA GATGCAGCAGCGGCAGCGGCTGCGCAACCTGGACCGCTTCCGAGAGAGCG CCCGCGCCATCCTGGTGGCGACCGATGTGGCTGCGCGGGGCCTGGACGTG CCCGCCGTGAACCACGTCGTCCACTACGACCTGCCGTCCCCTGAGGTCTT CATCCACCGTAGCGGCCGCACCGCCCGCGCCGCCGCCGCCGGGCTGGCGC TGGCGGTCGTGTCGCCCGCCGACGAGGCGCATTACGCCCGCATTTGTCGC GTGCTGGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10167:26..2384-

>mRNA_P-wetherbeei_contig10167.1.2 ID=mRNA_P-wetherbeei_contig10167.1.2|Name=mRNA_P-wetherbeei_contig10167.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig10167:26..2384- (Phaeothamnion wetherbeei SAG_119_79)
GGGGAGGGCGACGAGGCCGATGCAGCTGTGGCAGTGCCCTCATCTCCGTC
TTCCCAGTCTCCGTGGGAGCTCAGCGAGGCCGACTCGGCCGCCATGATGG
CGTGGACGGTTCTCGGAATCGACCTGCACCCGGCATTGACGTACCACCTC
CGGCGCCTCAGCTTCCTGGCGCCGACGCCAGTCCAGCGTCTCGTCCTACC
CAAGGCCGTTCTGTCCCGGAGCGATGTTCTGGGCGCGGCTGAGACGGGGT
CCGGCAAGACGCTCGCTTACGGGCTTCCCATCCTGCAGAGCATCCTCCGC
CGCCGCGACGCAGAAGCGGCAGCTGCACTAGCAGTAGCGGTGGCGGGGGC
AGCAGCAGGAGACGACAGTGGCGACGGTGCTGCGCTCATCCTCTGCCCGA
CGCGCGAGCTAGCGCTGCAGGTGACGCAGCACCTGACGGCCGTAACGAAA
GGGACCGGAGTCCGCGTGGCGACCCGGGCGGCGGCAGTGGTGGCAGTATC
CGCGTCTTCGGCGGCGGCGGCAGTGGCGGCGGTGAATCCAACGCTGCCGG
AAGGTCTCGTGCTGACGCACGTGCGGGCACTGCAGGAGGACAAGGACGTC
ATGTGCTACCTCTTTTGCGAGCAGTACAACGGGCGGACCCTCGTCTTCGT
CAACTCGATCGCTGGCGCCCGCCGCCTGACGGCGTTGCTAGTGGCGCTGC
GCCTGCCGGCGGCGGCCCTCCACGCGCAGATGCAGCAGCGGCAGCGGCTG
CGCAACCTGGACCGCTTCCGAGAGAGCGCCCGCGCCATCCTGGTGGCGAC
CGATGTGGCTGCGCGGGGCCTGGACGTGCCCGCCGTGAACCACGTCGTCC
ACTACGACCTGCCGTCCCCTGAGGTCTTCATCCACCGTAGCGGCCGCACC
GCCCGCGCCGCCGCCGCCGGGCTGGCGCTGGCGGTCGTGTCGCCCGCCGA
CGAGGCGCATTACGCCCGCATTTGTCGCGTGCTGGGG
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