mRNA_P-wetherbeei_contig1013.8.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5K757_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K757_9PHAE) HSP 1 Score: 103 bits (257), Expect = 1.100e-21 Identity = 55/148 (37.16%), Postives = 74/148 (50.00%), Query Frame = 2 Query: 266 ILKKDLGAGVMVSGA-----QFIGLKPDEMEAGGVLFFSSAIVRAVETRXXXXXXXGGARFRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRKNN 694 + KK G G+MVSG F P +++ A R ++R +D L E G WS+HLFEYGKN+EGYWTG KM + D++D +P+ VC FDW+S HDC+ AP S +NVG G+ N Sbjct: 613 VTKKSPGQGIMVSGTIIHNVGFFSASPAQIDQANRNRKMRCRESAAAARRGENVKE--EKYRAIDMLHVDEDGNSWSYHLFEYGKNKEGYWTGLKMLDHMNDVLDMVGVLYPEYKPVCLFDWTSCHDCLEVGAPRVSGMNVGFGQMRN 758
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5KYI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI9_9PHAE) HSP 1 Score: 100 bits (248), Expect = 3.370e-21 Identity = 63/162 (38.89%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 248 GQGVPFILKKDLGAGVMVSGAQFIGLKPDEMEAGGVLFFSSA---IVRAVETRXXXXXXXGGAR----------FRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRKNN 694 GQ VP +KK G G+MVSG V FFS++ I A R A+ FR +D L E G+ WS+HLFEYGKN+EGYWTG +M + D++D + +P+ V FDWSS HDCM APS +N+G+G N Sbjct: 132 GQHVP--VKKSQGQGIMVSGTII----------HNVGFFSASRAQIQDAERNRRKRCAATAAAKRRGENVKVEKFRPIDMLHEDEHGQYWSYHLFEYGKNKEGYWTGLRMLDHMSDVLDMFTVLYPEHKPVGLFDWSSCHDCMEVGAPSVKRMNLGVGGVRN 281
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5JX52_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX52_9PHAE) HSP 1 Score: 102 bits (253), Expect = 3.710e-21 Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 2 Query: 257 VPFILKKDLGAGVMVSGA-----QFIGLKPDEMEAGGVLFFSSAIVRAVETRXXXXXXXGGARFRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRK 688 V + KK G G+MVSG F+ E+++ L A + +R++D L+ E+G WS+HLFEYGKN+EGYWTG KM + D++D + ++P+ V FDWSS HDC+ AP+ +NVG G K Sbjct: 563 VHVVRKKSPGQGIMVSGTIIHNVGFVSATKREIKSAEQLRRKRCNASAAAAKRGENVKV--EVYRRIDKLYVDEEGNYWSYHLFEYGKNKEGYWTGLKMLDHMSDVIDMLAIKYPNHKPVGLFDWSSCHDCLEEGAPTVKRMNVGHGGK 709
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5JWN3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN3_9PHAE) HSP 1 Score: 100 bits (249), Expect = 3.790e-21 Identity = 60/160 (37.50%), Postives = 80/160 (50.00%), Query Frame = 2 Query: 248 GQGVPFILKKDLGAGVMVSGAQFIGLKPDEMEAGGVLFFSSAIVRAVETRXXXXXXXGGA-----------RFRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRKNN 694 GQ VP +KK G G+MVSG + G S A ++ E A +FR +D L E G+ WS+HLFEYGKN+EGYWTG +M + D++D + +P+ V FDWSS HDCM APS +N+G+G N Sbjct: 131 GQHVP--VKKSQGQGIMVSGTIIHNV--------GFFSASRAQIQDAERNRRKRCAASAAAKRRGENVKVEKFRPIDMLHEDEHGQYWSYHLFEYGKNKEGYWTGLRMLDHMSDVLDMFTVLYPEHKPVGLFDWSSCHDCMEVGAPSVKRMNLGVGGVRN 280
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5KQK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK7_9PHAE) HSP 1 Score: 100 bits (250), Expect = 8.540e-21 Identity = 63/162 (38.89%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 248 GQGVPFILKKDLGAGVMVSGAQFIGLKPDEMEAGGVLFFSSA---IVRAVETRXXXXXXXGGAR----------FRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRKNN 694 GQ VP +KK G G+MVSG V FFS++ I A R A+ FR +D L E G+ WS+HLFEYGKN+EGYWTG +M + D++D + +P+ V FDWSS HDCM APS +N+G+G N Sbjct: 278 GQHVP--VKKSQGQGIMVSGTII----------HNVGFFSASRAQIQEAERNRRKRCAASAAAKRRGENVKVEKFRPIDMLHEDEHGQYWSYHLFEYGKNKEGYWTGLRMLDHMSDVLDMFTVLYPEHKPVGLFDWSSCHDCMEVGAPSVKRMNLGVGGVRN 427
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5JCT5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT5_9PHAE) HSP 1 Score: 100 bits (249), Expect = 9.490e-21 Identity = 60/160 (37.50%), Postives = 80/160 (50.00%), Query Frame = 2 Query: 248 GQGVPFILKKDLGAGVMVSGAQFIGLKPDEMEAGGVLFFSSAIVRAVETRXXXXXXXGGA-----------RFRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRKNN 694 GQ VP +KK G G+MVSG + G S A ++ E A +FR +D L E G+ WS+HLFEYGKN+EGYWTG +M + D++D + +P+ V FDWSS HDCM APS +N+G+G N Sbjct: 177 GQHVP--VKKSQGQGIMVSGTIIHNV--------GFFSASRAQIQDAERNRRKRCAASAAAKRRGENVKVEKFRPIDMLHEDEHGQYWSYHLFEYGKNKEGYWTGLRMLDHMSDVLDMFTVLYPEHKPVGLFDWSSCHDCMEVGAPSVKRMNLGVGGVRN 326
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5KNP2_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP2_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.180e-20 Identity = 60/160 (37.50%), Postives = 80/160 (50.00%), Query Frame = 2 Query: 248 GQGVPFILKKDLGAGVMVSGAQFIGLKPDEMEAGGVLFFSSAIVRAVETRXXXXXXXGGA-----------RFRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRKNN 694 GQ VP +KK G G+MVSG + G S A ++ E A +FR +D L E G+ WS+HLFEYGKN+EGYWTG +M + D++D + +P+ V FDWSS HDCM APS +N+G+G N Sbjct: 418 GQHVP--VKKSQGQGIMVSGTIIHNV--------GFFSASRAQIQDAERNRRKRCAASAAAKRRGENVKVEKFRPIDMLHEDEHGQYWSYHLFEYGKNKEGYWTGLRMLDHMSDVLDMFTVLYPEHKPVGLFDWSSCHDCMEVGAPSVKRMNLGVGGVRN 567
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5K0T7_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T7_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.260e-20 Identity = 60/160 (37.50%), Postives = 80/160 (50.00%), Query Frame = 2 Query: 248 GQGVPFILKKDLGAGVMVSGAQFIGLKPDEMEAGGVLFFSSAIVRAVETRXXXXXXXGGA-----------RFRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRKNN 694 GQ VP +KK G G+MVSG + G S A ++ E A +FR +D L E G+ WS+HLFEYGKN+EGYWTG +M + D++D + +P+ V FDWSS HDCM APS +N+G+G N Sbjct: 565 GQHVP--VKKSQGQGIMVSGTIIHNV--------GFFSASRAQIQDAERNRRKRCAASAAAKRRGENVKVEKFRPIDMLHEDEHGQYWSYHLFEYGKNKEGYWTGLRMLDHMSDVLDMFTVLYPEHKPVGLFDWSSCHDCMEVGAPSVKRMNLGVGGVRN 714
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5JKY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY4_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 2.540e-20 Identity = 59/160 (36.88%), Postives = 79/160 (49.38%), Query Frame = 2 Query: 248 GQGVPFILKKDLGAGVMVSGAQFIGLKPDEMEAGGVLFFSSAIVRAVETRXXXXXXXGGA-----------RFRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRKNN 694 GQ VP +KK G G+MVSG + G S A ++ E A +FR +D L E G+ WS+HLFEYGKN+EGYWTG +M + D++D + +P+ V FDW S HDCM APS +N+G+G N Sbjct: 265 GQHVP--VKKSQGQGIMVSGTIIHNV--------GFFSASRAQIQDAERNRRKRCAASAAAKRRGENVKVEKFRPIDMLHEDEHGQYWSYHLFEYGKNKEGYWTGLRMLDHMSDVLDMFTVLYPEHKPVGLFDWPSCHDCMEVGAPSVKRINLGVGGVRN 414
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Match: A0A6H5KX84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX84_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 2.760e-20 Identity = 63/162 (38.89%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 248 GQGVPFILKKDLGAGVMVSGAQFIGLKPDEMEAGGVLFFSSA---IVRAVETRXXXXXXXGGAR----------FRKVDHLWYGEKGECWSFHLFEYGKNREGYWTGEKMKYFVEDMVDCASERFPDCLFVCKFDWSSNHDCMPPTAPSASALNVGIGRKNN 694 GQ VP +KK G G+MVSG L FFS++ I A R A+ FR +D L E G WS+HLFEYGKN+EGYWTG KM + D++D ++ +P+ V FDWSS HDCM A S +N+G+G N Sbjct: 289 GQHVP--VKKSQGQGIMVSGTIIHNLG----------FFSASREQIKEAERNRRKRCTASVAAKRPGENVKVEKFRPIDMLHKDEHGRYWSYHLFEYGKNKEGYWTGLKMLDHMADVLDVSTVLYPEHKPVGLFDWSSWHDCMEAVAQSVKRINLGVGGVRN 438 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1013.8.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1013.8.4 >prot_P-wetherbeei_contig1013.8.4 ID=prot_P-wetherbeei_contig1013.8.4|Name=mRNA_P-wetherbeei_contig1013.8.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp MVSGAQFIGLKPDEMEAGGVLFFSSAIVRAVETRRRSSAAAGGARFRKVDback to top mRNA from alignment at P-wetherbeei_contig1013:4780..5919+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1013.8.4 ID=mRNA_P-wetherbeei_contig1013.8.4|Name=mRNA_P-wetherbeei_contig1013.8.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1140bp|location=Sequence derived from alignment at P-wetherbeei_contig1013:4780..5919+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1013:4780..5919+ >mRNA_P-wetherbeei_contig1013.8.4 ID=mRNA_P-wetherbeei_contig1013.8.4|Name=mRNA_P-wetherbeei_contig1013.8.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig1013:4780..5919+ (Phaeothamnion wetherbeei SAG_119_79)back to top |