mRNA_P-wetherbeei_contig1013.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1013.7.1
Unique NamemRNA_P-wetherbeei_contig1013.7.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A6H5KFI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI8_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 3.610e-22
Identity = 70/203 (34.48%), Postives = 102/203 (50.25%), Query Frame = 3
Query:  279 MSAAQVLNTYLKAQALRFLYVLLNKGVARDAALDFAAEATGKAAATIAGWEAQYLRNGAIGMSEQGIWPEQEWLLERED-LVEACKERLRTHASVRGQPNMRAEDFAAWFNKTHMPQLEHLHNNPPPSPADAPPGAEYDVFKGLSMKRIEGADG-VVRREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDEVKL 881
            +S AQ      KA ALR +Y  L KGV++  A + +AE    +  TI  WE +Y   G I          + W+L  ++ L+   +  +R +A   G+PNM A+ F  + NK  +P++     N             YD FK   + +I+ A G VV   I+  TA+ W+HKLG  +   + G+Y DGHDR+DVLKYR E  L
Sbjct:    9 VSHAQAGKLLTKAHALRGVYSKLLKGVSKRQAFEESAEFLQVSVGTIKQWELEYRTKGRIVTGRHA----RRWILSLDEGLLAVIRFYIRNNAVKNGEPNMTAQTFCDYINKVILPEIAATKAN------------GYDPFKHAPVTKIKNAKGEVVSYAITESTARSWLHKLGCSYRDMQSGLYFDGHDREDVLKYRVETYL 195          
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A1X7V209_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V209_AMPQE)

HSP 1 Score: 67.0 bits (162), Expect = 5.630e-9
Identity = 45/160 (28.12%), Postives = 76/160 (47.50%), Query Frame = 3
Query:  414 TIAGWEAQYLRN-GAIGMSEQGIWPEQEWLLEREDLVEACKERLRTHASVRGQPNMRAEDFAAWFNKTHMPQLEHLHNNPPPSPADAPPGAEYDVFKGLSMKRIEGADGVVRREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDEVKLMLR 890
            T+  W +++  N G+   S+QG   ++ ++L+ E+      + +R++A V+G+PN  A  F  W N   +P             AD PP                     + + I  RTA  W+H+LG      +KG+Y+DGH+R DV++YR   ++ LR
Sbjct:  124 TVRNWRSEFYANKGSFHESKQGKH-KRPFVLDDEECRSKASQWVRSNACVKGKPNKTALKFCHWVNTDLLPN------------ADLPPS--------------------LPQSIKERTAVKWLHELGFRSQRHKKGIYIDGHERKDVVEYR---RIFLR 247          
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A1B7MLW6_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Rhizopogon vinicolor AM-OR11-026 TaxID=1314800 RepID=A0A1B7MLW6_9AGAM)

HSP 1 Score: 59.3 bits (142), Expect = 6.550e-8
Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 3
Query:  744 RREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDEVKLML 887
            ++ +++RTA+ W+ +LG    T RKGVY+DGH RDDV+KYR EV L L
Sbjct:   20 KQPLNMRTARCWLLELGWRHTTVRKGVYMDGHKRDDVVKYRKEVFLPL 67          
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A0C3D1Y2_9AGAM (Uncharacterized protein n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3D1Y2_9AGAM)

HSP 1 Score: 64.3 bits (155), Expect = 1.500e-7
Identity = 43/163 (26.38%), Postives = 70/163 (42.94%), Query Frame = 3
Query:  393 ATGKAAATIAGWEAQYLRNGAIGMSEQGIWPEQEWLLEREDLVEACKERLRTHASVRGQPNMRAEDFAAWFNKTHMPQLEHLHNNPPPSPADAPPGAEYDVFKGLSMKRIEGADGVVRREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDEVKL 881
            AT   +  + GW   ++ +  +  S++G   +   LL    +   C+  LR+H        +     +          L+HL +     PA      E D+F  + MK + G        +S+ TA+ W+H  G  +++  KG Y DGHDR DV+ YR  V L
Sbjct:  321 ATSWGSCQLRGWTNTWVASRDLPKSQRGCHAKVYSLLNDPAIAAECRAYLRSHKWSMNPEKLADFTASKLVGNAARKYLQHLVDTE--MPAGLKRYLELDLFPRIHMKAVRG--------VSLSTARRWLHAEGFHYISHNKGPYFDGHDRPDVVDYRQNVFL 473          
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A3N4LLY5_9PEZI (Uncharacterized protein (Fragment) n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4LLY5_9PEZI)

HSP 1 Score: 63.2 bits (152), Expect = 2.840e-7
Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 3
Query:  660 PADAPPGAEY----DVFK--GLSMKRIEGADGVVRREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDEVKL 881
            P+D P   E     D+FK   +   ++E      ++ IS RTA+ W++KLG  F   RKGVY+DGH+R+DV++YR EV L
Sbjct:  141 PSDLPAIKELRKIMDIFKVDSVLFHKLESKS---KKSISERTARNWLNKLGFEFKDVRKGVYIDGHEREDVVRYRQEVFL 217          
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A4S8MHN6_DENBC (Uncharacterized protein n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MHN6_DENBC)

HSP 1 Score: 63.2 bits (152), Expect = 2.930e-7
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 3
Query:  681 AEYDVFKGLSMKRIEGADGVVRREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDEVKL 881
            A  D+   L+   ++   G+ ++ IS  T+K WMHKLG  FV   +G YVDGH+RDDV+ YR  + L
Sbjct:   78 AAKDIVNYLNDPEVQRTHGL-KKSISAATSKRWMHKLGYRFVRNHRGQYVDGHERDDVVCYRQSIFL 143          
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A409VW04_9AGAR (RNF220 domain-containing protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409VW04_9AGAR)

HSP 1 Score: 63.2 bits (152), Expect = 3.750e-7
Identity = 24/46 (52.17%), Postives = 39/46 (84.78%), Query Frame = 3
Query:  735 GVVRREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDE 872
            G V+++ISVRTA+ W+H++G  +  KR G+YVDGH+R+DV++YR++
Sbjct:  374 GAVKKKISVRTAQRWLHRMGWRYGRKRNGMYVDGHEREDVVEYREK 419          
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A4Q2DWW2_9AGAR (Uncharacterized protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DWW2_9AGAR)

HSP 1 Score: 61.2 bits (147), Expect = 1.540e-6
Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 3
Query:  699 KGLSMKRIEGADGVVRREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDEVKL 881
            +G++ + I G   V++  +S +TA  W+ KLG   VT+RKGVY+DGH+R+DV++YR E  L
Sbjct:  456 EGINKEIIPGLGIVLKAPLSTKTATRWLVKLGWIKVTRRKGVYMDGHEREDVVQYRKESYL 516          
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A1C7MC79_GRIFR (Uncharacterized protein n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MC79_GRIFR)

HSP 1 Score: 60.8 bits (146), Expect = 1.640e-6
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 3
Query:  684 EYDVFKGLSMKRIEGADGVVRREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDEVKL 881
            E ++F  + MK        V + IS+RTA+ W+H+ G  ++  +K +Y DGHDR DV+KYR E+ L
Sbjct:  117 EVELFPRIHMK--------VGKGISIRTARRWLHREGFRYIEHKKSLYYDGHDRPDVVKYRQEIFL 174          
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Match: A0A4Z0A000_9AGAM (Uncharacterized protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A000_9AGAM)

HSP 1 Score: 60.5 bits (145), Expect = 2.230e-6
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 3
Query:  690 DVFKGLSMKRIEGADGVVRREISVRTAKLWMHKLGAGFVTKRKGVYVDGHDRDDVLKYRDEVKL 881
            DV      + I+   G+ ++ I +R A+LWMH+LG  +    KG YVDGH+RDDV  YRDEV L
Sbjct:   94 DVVAFTQREEIQERYGL-KKSIGMRMAQLWMHQLGYRWKRSPKGQYVDGHERDDVRAYRDEVFL 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1013.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFI8_9PHAE3.610e-2234.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X7V209_AMPQE5.630e-928.13Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A1B7MLW6_9AGAM6.550e-854.17Uncharacterized protein (Fragment) n=1 Tax=Rhizopo... [more]
A0A0C3D1Y2_9AGAM1.500e-726.38Uncharacterized protein n=1 Tax=Scleroderma citrin... [more]
A0A3N4LLY5_9PEZI2.840e-742.50Uncharacterized protein (Fragment) n=1 Tax=Terfezi... [more]
A0A4S8MHN6_DENBC2.930e-743.28Uncharacterized protein n=1 Tax=Dendrothele bispor... [more]
A0A409VW04_9AGAR3.750e-752.17RNF220 domain-containing protein n=1 Tax=Gymnopilu... [more]
A0A4Q2DWW2_9AGAR1.540e-645.90Uncharacterized protein n=1 Tax=Candolleomyces abe... [more]
A0A1C7MC79_GRIFR1.640e-640.91Uncharacterized protein n=1 Tax=Grifola frondosa T... [more]
A0A4Z0A000_9AGAM2.230e-646.88Uncharacterized protein n=1 Tax=Hericium alpestre ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1013contigP-wetherbeei_contig1013:4006..5075 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog400682.PAC_15701827
Model size1070
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.01e-10
EggNOG OGs2D50F@1|root,2SWWM@2759|Eukaryota
Cds size846
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185856.054954-UTR-P-wetherbeei_contig1013:4005..40551683185856.054954-UTR-P-wetherbeei_contig1013:4005..4055Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1013 4006..4055 +
1683185856.0742486-UTR-P-wetherbeei_contig1013:4901..50751683185856.0742486-UTR-P-wetherbeei_contig1013:4901..5075Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1013 4902..5075 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185856.064913-CDS-P-wetherbeei_contig1013:4055..49011683185856.064913-CDS-P-wetherbeei_contig1013:4055..4901Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1013 4056..4901 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1013.7.1prot_P-wetherbeei_contig1013.7.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1013 4056..4901 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1013.7.1

>prot_P-wetherbeei_contig1013.7.1 ID=prot_P-wetherbeei_contig1013.7.1|Name=mRNA_P-wetherbeei_contig1013.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=282bp
MKRDAKREAEAAERTAACFRFREEDAIPHFEAVMAAVNCTTHDARFRRAR
REAAAASGEGAAEPAGEQPSILDLDGMSAAQVLNTYLKAQALRFLYVLLN
KGVARDAALDFAAEATGKAAATIAGWEAQYLRNGAIGMSEQGIWPEQEWL
LEREDLVEACKERLRTHASVRGQPNMRAEDFAAWFNKTHMPQLEHLHNNP
PPSPADAPPGAEYDVFKGLSMKRIEGADGVVRREISVRTAKLWMHKLGAG
FVTKRKGVYVDGHDRDDVLKYRDEVKLMLRP*
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mRNA from alignment at P-wetherbeei_contig1013:4006..5075+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1013.7.1 ID=mRNA_P-wetherbeei_contig1013.7.1|Name=mRNA_P-wetherbeei_contig1013.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1070bp|location=Sequence derived from alignment at P-wetherbeei_contig1013:4006..5075+ (Phaeothamnion wetherbeei SAG_119_79)
ACGCCAGCTGGTACCAGAAACGGTACAAGAAGGCGCGGGCGGAGCAACAG ATGAAGCGGGACGCAAAGCGGGAGGCCGAGGCGGCAGAACGGACGGCTGC GTGCTTCCGGTTCCGGGAGGAGGACGCCATTCCTCACTTCGAAGCCGTGA TGGCGGCCGTCAACTGCACGACGCACGATGCGCGCTTTCGGCGAGCGCGG CGCGAGGCCGCTGCTGCATCTGGCGAGGGCGCCGCAGAGCCGGCGGGGGA GCAACCGAGCATTTTGGACCTTGATGGCATGTCGGCAGCGCAGGTGCTTA ACACGTACCTCAAAGCGCAGGCGCTGCGCTTCCTCTACGTGCTGCTCAAC AAAGGCGTTGCAAGAGACGCCGCGCTCGACTTTGCGGCCGAGGCAACGGG GAAGGCAGCGGCGACGATTGCTGGATGGGAGGCGCAGTACCTTCGGAACG GTGCCATCGGCATGTCCGAGCAAGGGATATGGCCAGAGCAGGAGTGGCTG CTCGAGCGGGAAGACCTCGTCGAGGCGTGCAAGGAAAGGCTGCGCACGCA CGCGTCCGTCCGCGGCCAACCGAACATGAGGGCGGAGGACTTTGCGGCGT GGTTTAACAAGACGCACATGCCGCAGCTGGAGCACCTCCACAATAACCCG CCGCCGTCGCCCGCCGATGCCCCACCCGGCGCCGAATATGACGTCTTTAA GGGGCTCTCGATGAAGCGAATAGAGGGGGCCGACGGTGTGGTGCGGCGGG AGATCAGCGTCCGGACAGCAAAGCTATGGATGCACAAGCTCGGGGCCGGA TTTGTCACTAAGCGAAAAGGCGTGTACGTAGACGGGCACGACCGGGATGA CGTTCTGAAGTACCGCGACGAGGTGAAACTCATGCTGCGGCCATGATAAG AAACGTTTGCTTGAAGAAAAGCATAGTCTTTTTAAATTCTGTTTGTGCCG CCGCTGACAAAGGAGGACCGCCGCGGCCACCGCTGCCGATTTTTAAGTTT CCTCTGAACGCTGCCACCCCATGAATGCGGCATCAGTAGATGTCCTCAAC AAAAGGAGCTGAACCGCAAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1013:4006..5075+

>mRNA_P-wetherbeei_contig1013.7.1 ID=mRNA_P-wetherbeei_contig1013.7.1|Name=mRNA_P-wetherbeei_contig1013.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=846bp|location=Sequence derived from alignment at P-wetherbeei_contig1013:4006..5075+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGCGGGACGCAAAGCGGGAGGCCGAGGCGGCAGAACGGACGGCTGC
GTGCTTCCGGTTCCGGGAGGAGGACGCCATTCCTCACTTCGAAGCCGTGA
TGGCGGCCGTCAACTGCACGACGCACGATGCGCGCTTTCGGCGAGCGCGG
CGCGAGGCCGCTGCTGCATCTGGCGAGGGCGCCGCAGAGCCGGCGGGGGA
GCAACCGAGCATTTTGGACCTTGATGGCATGTCGGCAGCGCAGGTGCTTA
ACACGTACCTCAAAGCGCAGGCGCTGCGCTTCCTCTACGTGCTGCTCAAC
AAAGGCGTTGCAAGAGACGCCGCGCTCGACTTTGCGGCCGAGGCAACGGG
GAAGGCAGCGGCGACGATTGCTGGATGGGAGGCGCAGTACCTTCGGAACG
GTGCCATCGGCATGTCCGAGCAAGGGATATGGCCAGAGCAGGAGTGGCTG
CTCGAGCGGGAAGACCTCGTCGAGGCGTGCAAGGAAAGGCTGCGCACGCA
CGCGTCCGTCCGCGGCCAACCGAACATGAGGGCGGAGGACTTTGCGGCGT
GGTTTAACAAGACGCACATGCCGCAGCTGGAGCACCTCCACAATAACCCG
CCGCCGTCGCCCGCCGATGCCCCACCCGGCGCCGAATATGACGTCTTTAA
GGGGCTCTCGATGAAGCGAATAGAGGGGGCCGACGGTGTGGTGCGGCGGG
AGATCAGCGTCCGGACAGCAAAGCTATGGATGCACAAGCTCGGGGCCGGA
TTTGTCACTAAGCGAAAAGGCGTGTACGTAGACGGGCACGACCGGGATGA
CGTTCTGAAGTACCGCGACGAGGTGAAACTCATGCTGCGGCCATGA
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