mRNA_P-wetherbeei_contig10124.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: A0A6H5J9S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S6_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 4.850e-18 Identity = 55/163 (33.74%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 1 MHSFPAGLWSVLGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALGLLSFFRNKVAGKKTSALLGSARNAIRWPHTDKVPRRRFNTSWHKWMSFVATGALALNSARRRRFDRHRVWAIRHLGFGYQPHFQRIIN----WVSLQHVAKFVDL--DWVENRRWLF 471 MH PAGLWSV+ P+QL+P RA+ HR GR+F+ S+SI+LGL+ + R A+ + F+ TG LA++ AR +RF HRVW +RH+ GY H QR++ W+ + + DL D +E R +F Sbjct: 106 MHILPAGLWSVIAPLQLNPSFRAKHRAAHRRLGRLFIFMSVSISLGLVPLVLGVAPTTTATGDSRGGRGALLFAGY-----------------FLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLLGHLTWWIFPLLMPGYTDLTNDGMELRARVF 251
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: D7FX31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX31_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 8.350e-18 Identity = 60/174 (34.48%), Postives = 91/174 (52.30%), Query Frame = 1 Query: 1 MHSFPAGLWSVLGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALGLLSFFRNKVAGKKTSALLGSARNAIRWPHTDKVPRRRFNTSWHKWMSFVATGALALNSARRRRFDRHRVWAIRHLGFGYQPHFQRII---NWVSLQHVA--KFVDLDWVENRRWLFDVCSNVALLAVV 507 MH PAGLWSV+ P+QL+P RA+ HR GR+F+ S+S+ALG++ ++ S + IR + V F + + F+ATG LA AR +RF HR+W +RH+ GY H QR++ +W ++ VA K+ +L E DV L+++V Sbjct: 76 MHILPAGLWSVIAPLQLNPSFRAKHRTAHRRLGRLFIFMSVSMALGVVP-------------IVLSGASLIR--RSVAVDGGLFTLAAY----FLATGVLAATHARSKRFADHRIWILRHVAMGYAAHVQRLLAALSWWAIPLVAPAKYTELS-PEGALLRGDVFGGYFLVSIV 229
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: D7FX30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX30_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 1.730e-17 Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 1 MHSFPAGLWSVLGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALGLLSFFRNKVAGKKTSALLGSARNAIRWPHTDKVPRRRFNTSWHKWMSFVATGALALNSARRRRFDRHRVWAIRHLGFGYQPHFQRII 399 MH PAGLWSV+ P+QL P RA+ HR GR+F+ S+SI+LGL+ ++G T+ + R ++ + F+ TG LA++ AR +RF HRVW +RH+ GY H QR++ Sbjct: 107 MHILPAGLWSVIAPLQLSPSFRAKHRTAHRRLGRLFIFMSVSISLGLVPLV---LSGAPTTPNWSNGRESLVFAGY-----------------FLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLL 219
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: A0A3S0LG82_9BURK (DUF2306 domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3S0LG82_9BURK) HSP 1 Score: 61.6 bits (148), Expect = 3.430e-8 Identity = 43/121 (35.54%), Postives = 57/121 (47.11%), Query Frame = 1 Query: 1 MHSFPAGLWSVLGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALG--LLSFFRNKVAGKKTSALLGSARNAIRWPHTDKVPRRRFNTSWHKWMSFVATGALALNSARRRRFDRHRVWAIR 357 +H F A +W + G +QL P +R P LHRW GR++LCCS ++ALG L + R V G L S NA+ + GA A +AR RF HR WA+R Sbjct: 91 LHLFFAVVWVLSGVIQLVPAIRRHLPALHRWNGRLYLCCSAALALGGLWLVWVRGGVVGDVGQHLAISI-NAL---------------------LILGCGAKAWQAARSHRFSDHRRWALR 189
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: A0A1D7NKE5_9SPHN (Putative membrane protein n=1 Tax=Porphyrobacter sp. LM 6 TaxID=1896196 RepID=A0A1D7NKE5_9SPHN) HSP 1 Score: 58.9 bits (141), Expect = 1.790e-7 Identity = 44/125 (35.20%), Postives = 59/125 (47.20%), Query Frame = 1 Query: 31 VLGPMQLHPGLRAQRPLLHRWCGRIFLC-CSLSIALGLLSFFRNKVAGKKTSALLGSARNAIRWPHTDKVPRRRFNTSWHKWMSFVATGALALNSARRRRFDRHRVWAIRHLGFGYQPHFQRIIN 402 V+ P Q PGLR RP LHRW GR+FL C ++ LG+ LGS I+WP + ++P W + A+A +ARRR F HR +AIR G + R+IN Sbjct: 69 VIAPFQFVPGLRQNRPQLHRWLGRVFLANCMVAAILGIY---------------LGST---IQWPGS-RIPLSILGALWFLF------AAIAWQAARRRDFANHRRFAIRAFALGGAFVWVRLIN 168
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: UPI00191FF0A5 (DUF2306 domain-containing protein n=2 Tax=Piscinibacter sp. HJYY11 TaxID=2801333 RepID=UPI00191FF0A5) HSP 1 Score: 57.8 bits (138), Expect = 4.460e-7 Identity = 36/95 (37.89%), Postives = 49/95 (51.58%), Query Frame = 1 Query: 4 HSFPAGLWSVLGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALGLLSFFRNKVAGKKTSALLGSARNAIRWPHTD----KVPRRRFNTSWHKWM 276 H+F AGL +LGP Q LRA+RP LHRW GRI+L + + G+ +++A A LG A AI W +T + RR +WM Sbjct: 55 HAFAAGLALLLGPWQFSSRLRARRPQLHRWVGRIYLVAGIVVG-GVSGLLLSRLAQGGWVAQLGFACLAIAWLYTGYRGYRAIRRGERAQHRRWM 148
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: A0A844AVD2_9BURK (DUF2306 domain-containing protein n=1 Tax=Caenimonas koreensis DSM 17982 TaxID=1121255 RepID=A0A844AVD2_9BURK) HSP 1 Score: 57.0 bits (136), Expect = 7.950e-7 Identity = 40/124 (32.26%), Postives = 57/124 (45.97%), Query Frame = 1 Query: 4 HSFPAGLWSVLGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALGLLSFFRNKVAGKKTSALLGSARNAIRWPHTDKVPRRRFNTSWHKWMSFVATGALALNSARRRRFDRHRVWAIRHLGFGY 375 H + L VLGP Q + LRA+RP LHRW GRI+L ++ + G+ + + A A G A A+ W + TGA+A +AR R F+ HR W IR+ + Sbjct: 51 HILASALALVLGPFQFNTRLRARRPALHRWMGRIYLGVAVLVG-GIAGLYMSYYAFGGLLAKSGFATLALGW---------------------LYTGAMAYVAARARDFNAHRRWMIRNFALTF 152
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: A0A1X4NTA5_9RHOB (Uncharacterized protein n=2 Tax=Marivita cryptomonadis TaxID=505252 RepID=A0A1X4NTA5_9RHOB) HSP 1 Score: 53.9 bits (128), Expect = 1.020e-5 Identity = 40/119 (33.61%), Postives = 53/119 (44.54%), Query Frame = 1 Query: 1 MHSFPAGLWSVLGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALGLLSFFRNKVAGKKTSALLGSARNAIRWPHTDKVPRRRFNTSWHKWMSFVATGALALNSARRRRFDRHRVWAIR 357 +H A + V G +Q P LRA+RP+LHRW GR++ C L G+ F+ A LG A+ W + T A A+ ARRR F +HRVW IR Sbjct: 49 LHVTLAPVALVAGVLQFMPKLRARRPVLHRWTGRLYALCVL--VSGVAGFWLGLFAPGGWVPGLGFMILAVLW---------------------IGTTAKAVYHARRREFAQHRVWMIR 144
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: A0A539DF69_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A539DF69_9BACT) HSP 1 Score: 52.0 bits (123), Expect = 7.850e-5 Identity = 41/118 (34.75%), Postives = 54/118 (45.76%), Query Frame = 1 Query: 4 HSFPAGLWSVLGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALGLLSFFRNKVAGKKTSALLGSARNAIRWPHTDKVPRRRFNTSWHKWMSFVATGALALNSARRRRFDRHRVWAIR 357 H A + ++ G MQL P +R P LHRW GR FL + +AL F+ V G SA+ SA I + + G LA A +RRFD+HRVWA+R Sbjct: 79 HVLLASVVTLAGLMQLIPAIRRAVPSLHRWTGRTFLLVAGFMALS--GFWLTLVRGTSLSAV-SSAAIVI------------------DGLLILVFGGLAWRHAVKRRFDQHRVWAMR 175
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Match: A0A327T0F8_9ACTN (Putative membrane protein n=1 Tax=Kitasatospora sp. SolWspMP-SS2h TaxID=1305729 RepID=A0A327T0F8_9ACTN) HSP 1 Score: 51.6 bits (122), Expect = 8.290e-5 Identity = 37/108 (34.26%), Postives = 49/108 (45.37%), Query Frame = 1 Query: 34 LGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALGLLSFFRNKVAGKKTSALLGSARNAIRWPHTDKVPRRRFNTSWHKWMSFVATGALALNSARRRRFDRHRVWAIR 357 LGP+Q PGLRA+RP LHRW GR+++ + + LG L LL PH P + ++ T AL L+ AR RR HR W +R Sbjct: 79 LGPLQFLPGLRARRPALHRWTGRLYVLAAAATGLGGL--------------LLA--------PHGLHPPVAPLGFTVLALLTLTTT-ALGLHHARHRRLAAHRAWMLR 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10124.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10124.1.1 >prot_P-wetherbeei_contig10124.1.1 ID=prot_P-wetherbeei_contig10124.1.1|Name=mRNA_P-wetherbeei_contig10124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp MHSFPAGLWSVLGPMQLHPGLRAQRPLLHRWCGRIFLCCSLSIALGLLSFback to top mRNA from alignment at P-wetherbeei_contig10124:1183..1844- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10124.1.1 ID=mRNA_P-wetherbeei_contig10124.1.1|Name=mRNA_P-wetherbeei_contig10124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=662bp|location=Sequence derived from alignment at P-wetherbeei_contig10124:1183..1844- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10124:1183..1844- >mRNA_P-wetherbeei_contig10124.1.1 ID=mRNA_P-wetherbeei_contig10124.1.1|Name=mRNA_P-wetherbeei_contig10124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig10124:1183..1844- (Phaeothamnion wetherbeei SAG_119_79)back to top |