mRNA_P-wetherbeei_contig10120.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: A0A7S2D233_9STRA (Choline transporter-like protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D233_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 5.030e-21 Identity = 56/118 (47.46%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 28 FNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLCGLAAGWLLGVTGGAGMAL-LAAFGAFAGFFMATVSMSVVGSAVATVFVCFATDHLVFGR 378 FNR+A + A+YG + + AG++T SLF R GWTAIVND L+ N+L L C+ A + G G +G G+ AL LA +G G+F+ V M +V SAVATVFVCFA D F R Sbjct: 85 FNRWAFVFVAVYGLEFKEAGQKTHSLFRRLGWTAIVNDDLIQNSLALGCLVTGAFVGIVGFTYG--MGAGLGSDNALELAIWGLVIGYFLTKVLMGLVDSAVATVFVCFAQDPKAFQR 200
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: A0A7S2Y4U5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4U5_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.660e-19 Identity = 57/117 (48.72%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 19 VSVFNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLCGLAAGWLLGVT---GGAGMALLAAFGAFAGFFMATVSMSVVGSAVATVFVCFATD 360 +SVF RYAL Y A+ G L TAG ET +LF RRGW+AIVND L AL C VA + G+A+G+ T G A L+ G F GF + ++ M+V+ SAVATVF+CFA D Sbjct: 89 LSVFTRYALVYAALTGTSLTTAGAETVALFRRRGWSAIVNDDLTTVALRAGCAVVAVV----GMASGFAYARTMELGSTYEAFLSVCGFFIGFGVCSILMTVIDSAVATVFLCFAED 201
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: A0A7S1CLT9_9STRA (Choline transporter-like protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLT9_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.210e-14 Identity = 47/128 (36.72%), Postives = 68/128 (53.12%), Query Frame = 1 Query: 19 VSVFNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLCGLAAGWLLGV---TGGAGMALLAAFGAFAGFFMATVSMSVVGSAVATVFVCFATDHLVFGRRVLTH 393 V FN++A CY IYG D R+AG ++LF RGWT ++ND L+ AL++ C+ V + G A W +G G+ + A GF M + +V+ S+VATVFVC+A + G H Sbjct: 397 VEYFNKWAFCYVGIYGKDFRSAGSAVFALFRDRGWTTVINDDLIGTALSIGCLVVGVGTGIIG--AIWAVGTDPNATGSWIFASAFISLIIGFMMCAIVSTVITSSVATVFVCWAENPEALGHTHPEH 522
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: A0A7S3MAD2_9STRA (Choline transporter-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAD2_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.180e-14 Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 19 VSVFNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLCGLAAGWLLGVTGGAGMALLAAFGAFAGFFMATVSMSVVGSAVATVFVCFATD 360 V FNRYALC+ AIY +D RTA +LF RGW+ ++ND ++D + + + + G G L G+ G A LL FG AG+ ++ V++S + SAV+TV+VC+ + Sbjct: 342 VVYFNRYALCFVAIYHSDFRTASVSASNLFRTRGWSTLLNDDIIDVVMNIGHVIIGTTSMSTGYIYGRLTGL-GHAYTVLLTVFGFVAGYLLSIVALSTISSAVSTVYVCYVDN 454
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: A0A485L1E1_9STRA (Choline transporter-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1E1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 3.050e-14 Identity = 51/126 (40.48%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 19 VSVFNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLCGLAAGWLLGVTGGAGMALLAAF-GAFAGFFMATVSMSVVGSAVATVFVCFATDHLVFGRRVLTH 393 + VFNR+A Y IYG AGR +LF RG+ AI+ND L+ NAL A V LC L GLA ++ ++ F G F G ++ V + VV SAVATV+VCFA D + H Sbjct: 384 MEVFNRWAFVYVGIYGYKFTDAGRAVMTLFQSRGFDAIINDDLISNALGFASFGVGCLCALLGLAYNYINTANQFQYSEIIFPFIGLFFGIGISLVPLGVVDSAVATVYVCFAEDPVALQHSHTEH 509
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: W7TND4_9STRA (Choline transporter-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TND4_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.320e-14 Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 28 FNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLCGLAAGWLLGVTGGAGMALLAAFGAFAGFFMATVSMSVVGSAVATVFVCFA 354 FNRYA Y A+YG +GR+ ++LF +G T ++NDQLV N T A L L G G+ GG A+LA G G + + +S+V SAVATVFVC+A Sbjct: 531 FNRYAFTYVAMYGTSFVESGRDAFALFKSKGLTVLINDQLVSNVFTFLSFGAAVLIALVGYGFAMAFGLDGGY-KAVLAGVGFVVGLLVCAIVLSIVDSAVATVFVCWA 638
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: A0A0W8C422_PHYNI (Choline transporter-like protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C422_PHYNI) HSP 1 Score: 70.9 bits (172), Expect = 3.860e-13 Identity = 43/117 (36.75%), Postives = 59/117 (50.43%), Query Frame = 1 Query: 28 FNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLCGLAAGWLLGVTGGAGMALLAAFGAFAGFFMATVSMSVVGSAVATVFVCFATDHLVFGR 378 FNR+A Y +YG +AG+ LF +RG+TA++ND LV + L I G+ALLA G GF +A ++V+ S+VAT+FVCFA D F R Sbjct: 4 FNRWAYVYVGVYGYSFMSAGKAVSQLFHQRGFTALINDDLVHIVIRLTAI-----------------------GVALLAILGFIIGFSVALTPLAVISSSVATIFVCFAEDPAPFQR 97
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: G4Z6R9_PHYSP (Choline transporter-like protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z6R9_PHYSP) HSP 1 Score: 72.0 bits (175), Expect = 4.150e-12 Identity = 49/123 (39.84%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 31 NRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLC--GLAAGWLLGVTG----GAGMALLAAFGAFAGFFMATVSMSVVGSAVATVFVCFATDHLVFGRR 381 N++A Y IYG D T+G+ SLF RGWTAI+ND LV AL + T C G+ G+L + G+ A+L+ G FAG + + VV +A+ T+FVCFA D L GR Sbjct: 305 NQWAFVYIGIYGNDFYTSGKAVISLFKNRGWTAIINDDLVKGALRIGI-------TTCFIGILLGYLSPASWFEPLGSRFAILSLAGLFAGTGITVIFSQVVVAALHTIFVCFAEDPLPLGRN 420
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: A0A024GD38_9STRA (Choline transporter-like protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GD38_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.900e-12 Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 28 FNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLCGLAAGWL---LGVTGGAG------------MALLAAFGAFAGFFMATVSMSVVGSAVATVFVCFATDHLVFGR 378 FN++A C+ A+YG+ L AG +T++L RGWTA+VND L+ N L++ C+ V L G+ A WL L T + L + F +++ SV+ S V TVF+CFA D VF R Sbjct: 353 FNKFAFCHVAMYGSSLGKAGTDTFALLRNRGWTALVNDSLISNVLSVGCLLVGLLSG--GIGASWLYLTLNCTQTEAALHPEECETFSVVILSFVICSTTAFAISSTISSVLESVVITVFICFAEDPAVFER 482
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Match: A0A485LJ83_9STRA (Choline transporter-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJ83_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 8.010e-12 Identity = 50/128 (39.06%), Postives = 62/128 (48.44%), Query Frame = 1 Query: 19 VSVFNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVDNALTLACIAVAALCTLCGLAAG--------------WLLGVTGGAGMALLAAFGAFAGFFMATVSMSVVGSAVATVFVCFATD 360 V FN+YA Y IYG AG+ETW LF + GW+AI ND L+DN L + V L G AAG W + A A L G GF + + M+V+ S+VAT FV FA D Sbjct: 333 VQYFNKYAYSYVGIYGFSFLRAGKETWELFEKMGWSAIANDSLIDNVLFAGSLFVG----LGGAAAGYGAVSYDRQYNNRLWTQNLENPA--ATLGMAGLLIGFSICYIVMAVINSSVATAFVLFAED 454 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10120.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10120.2.1 >prot_P-wetherbeei_contig10120.2.1 ID=prot_P-wetherbeei_contig10120.2.1|Name=mRNA_P-wetherbeei_contig10120.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp MPRFFQVSVFNRYALCYCAIYGADLRTAGRETWSLFGRRGWTAIVNDQLVback to top mRNA from alignment at P-wetherbeei_contig10120:1662..2345- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10120.2.1 ID=mRNA_P-wetherbeei_contig10120.2.1|Name=mRNA_P-wetherbeei_contig10120.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig10120:1662..2345- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10120:1662..2345- >mRNA_P-wetherbeei_contig10120.2.1 ID=mRNA_P-wetherbeei_contig10120.2.1|Name=mRNA_P-wetherbeei_contig10120.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig10120:1662..2345- (Phaeothamnion wetherbeei SAG_119_79)back to top |