mRNA_P-wetherbeei_contig10114.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: D7FQK5_ECTSI ([Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK5_ECTSI) HSP 1 Score: 254 bits (650), Expect = 3.910e-80 Identity = 116/205 (56.59%), Postives = 146/205 (71.22%), Query Frame = 1 Query: 1 VKIGEYYDGHTA-RDWVPVEKDYGKPQPYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQNEPGDVGCLERYCELMTQTGTAAEAAADPCPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDEEFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDLGKNINGHHEVSHLCELLFT 612 VKIGE Y G ++W+P+ + PQPYPP+TDSW+ T+LW GIASFRD +CG+TLFN++SKAS+PER+ AGVVQQN D GCL YC LM + + CP++ N+RVL + A+EA GPCW RHLQ + L DEEFCMQ DSHMD+ +GWD+AMM EWAA NEY LSTYVQ LG N++ EV+HLCE+ F+ Sbjct: 81 VKIGELYQGRVEPKEWIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLATYCRLMGEKDGKKD-----CPFRDNIRVLEMHASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVYFS 280
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: A0A6H5L6U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U7_9PHAE) HSP 1 Score: 255 bits (652), Expect = 1.320e-78 Identity = 117/205 (57.07%), Postives = 146/205 (71.22%), Query Frame = 1 Query: 1 VKIGEYYDGHTA-RDWVPVEKDYGKPQPYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQNEPGDVGCLERYCELMTQTGTAAEAAADPCPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDEEFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDLGKNINGHHEVSHLCELLFT 612 VKIGE Y G ++W+P+ + PQPYPP+TDSW+ T+LW GIASFRD +CG+TLFN++SKAS+PER+ AGVVQQN D GCL YC LM + A CP++ N+RVL + A+EA GPCW RHLQ + L DEEFCMQ DSHMD+ +GWD+AMM EWAA NEY LSTYVQ LG N++ EV+HLCE+ F+ Sbjct: 39 VKIGELYQGRVEPKEWIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLATYCRLM-----GVKDGAKDCPFRENIRVLEMHASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVYFS 238
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: A0A836CB83_9STRA (GlcNAc-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB83_9STRA) HSP 1 Score: 250 bits (638), Expect = 9.410e-78 Identity = 118/208 (56.73%), Postives = 141/208 (67.79%), Query Frame = 1 Query: 1 VKIGEYYDGHTARDWVPVEKDYGKPQPYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQNEPGDVGCLERYCELMTQTGTAAEAAADPCPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDEEFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDLGKNINGHHEVSHLCELLFTSQAR 624 +KIGE Y A DWV V +D PQP+PP TDSW+ +LWVGIAS+RD RCGKTL NM++KA HPER+ VVQQ GD C++ YC L A + A CP+ NVRVL DAAEAAGP WGRHLQ + LRDEEFC+Q DSHMD W+ +M EWA NE+A LSTYVQ ++DLG N+ GH E SHLCE+L+ Q R Sbjct: 6 LKIGEVYS-IKAGDWVAVHRDLDGPQPFPPPTDSWSTAEATLWVGIASYRDPRCGKTLHNMFTKAKHPERVHVAVVQQMVEGDADCMDDYCAL------AGKDANGECPFAKNVRVLRTDAAEAAGPTWGRHLQQYLLRDEEFCLQIDSHMDMIQDWEAGLMAEWAQINNEHAVLSTYVQDVEDLGVNVGGHFETSHLCEILWEEQVR 206
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: A0A7S2XXE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXE5_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.650e-68 Identity = 104/190 (54.74%), Postives = 134/190 (70.53%), Query Frame = 1 Query: 43 WVPVEKDYGKPQPYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQNEPGDVGCLERYCELMTQTGTAAEAAADPCPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDE-EFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDLGKNINGHHEVSHLCELLF 609 WV V K+ G PQP+PPK+DS+ + T++W GIASFRD+RC +TL N++ KA +PER++ G+VQQN DV CLE YC M T + A CPY S +R+L V A EA GP +GRHL + LRDE EFCMQTDSHMDY D WD+ M+ W A GNEY ++TYV +DL KN+NG +EV HLC+L++ Sbjct: 44 WV-VLKETG-PQPHPPKSDSYTRSDTTIWNGIASFRDSRCPRTLVNLFQKAKYPERVYVGLVQQNGDDDVDCLEEYCNRMGSTNRKEDEA--KCPYYSQIRILRVHAREARGPTYGRHLMSYLLRDEDEFCMQTDSHMDYVDDWDVKMLDMWGAIGNEYGVITTYVNRFEDLNKNLNGVNEVPHLCDLVW 229
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: A0A7S3YLX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLX0_HETAK) HSP 1 Score: 207 bits (528), Expect = 9.650e-61 Identity = 103/211 (48.82%), Postives = 139/211 (65.88%), Query Frame = 1 Query: 19 YDGHTARDWVPVEKDYGKPQPYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQ-NEPGDVGCLERYCELMTQTGTAAEAAAD-----PCPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDEEFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDL--GKNINGHHEVSHLCELLFTSQARM 627 YDG W+P+ ++ P PYPPK+DSW + T+++VGIA+FRD+RC KTLFNM++KA +P+R+F G+VQQ +E D C+E+YCELM + AAD CP+ VR+ V A GP +GRHLQ + LRDEEFCMQTDSHMDY D WD ++ W AA NEYA L+TYV +DL G+ ++ +V H+C+L + A M Sbjct: 3 YDGIG---WIPLIEEPRPPLPYPPKSDSWKQDNTTIFVGIAAFRDSRCPKTLFNMFTKAKNPDRVFVGLVQQWDETKDTDCIEKYCELMGAAVAGQDQAADRRRAQACPHFEQVRIHRVSHLLARGPTFGRHLQSYLLRDEEFCMQTDSHMDYIDHWDQEVLAAWGAAHNEYAVLATYVNRFEDLESGRALHPRFQVPHICQLEYVGGAYM 210
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: A0A7S3UPC0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPC0_HETAK) HSP 1 Score: 197 bits (502), Expect = 2.200e-60 Identity = 90/183 (49.18%), Postives = 123/183 (67.21%), Query Frame = 1 Query: 79 PYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQNEPGDVGCLERYCELM------TQTGTAAEAAADPCPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDEEFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDLGKNINGHHEVSHLCELLF 609 P+PPK ++++ T+++VGI+ FRD+RC KTL+N+Y+KA +P R+F G+VQQN GDV C+++YCELM T A AA CPY + +R V A GP +GRHLQ + LRDE+FCMQ DSHMD+ D WD + W A NEYA L+TYV ++DL +NIN EV ++C+L F Sbjct: 51 PHPPKDENYSSKDTTIYVGISGFRDSRCPKTLYNLYTKAENPARVFVGLVQQNAEGDVDCVDKYCELMGYRGQKTDAARARPAAEGGCPYFAQIRANRVSHLLARGPTFGRHLQVYLLRDEQFCMQIDSHMDFMDHWDTLNLEHWGLARNEYAVLTTYVHKVEDLNRNINNRWEVPNICKLRF 233
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: A0A6H5KPV9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPV9_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.450e-58 Identity = 95/190 (50.00%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 43 WVPVEKDYGKPQPYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQNEPGDVGCLERYCELMTQTGTAAEAAADPCPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDEEFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDLGKNINGHHEVSHLCELLFT 612 W+ + D P+P PPKT SW + TS++VG++SFRD RC +TL N +SKA +PERI GVVQQN+ DV C+ YC++M A CPY N++ L V+A AAGPC+GRHLQ + LRDEEFCMQTDSHMD WD +M W NEY L+TYV ++ L + EV HLC+L FT Sbjct: 53 WIALWDDDEAPRPPPPKTTSWKRSDTSIFVGVSSFRDKRCPQTLVNFFSKAKYPERITVGVVQQNDHEDVDCVVEYCKMM-----GGHAEGPLCPYFDNIKTLRVEARWAAGPCYGRHLQSYMLRDEEFCMQTDSHMDVVQDWDAKLMAMWGRVNNEYGILTTYVHKIEQLHEGYENKKEVPHLCQLGFT 237
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: A0A4D9D890_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D890_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.570e-58 Identity = 98/198 (49.49%), Postives = 131/198 (66.16%), Query Frame = 1 Query: 61 DYGKPQPYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQNEPGDVGCLERYCE-LMTQTGTAAEA-AADP-------CPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDEEFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDLGKNINGHHEVSHLCELLFTSQARM 627 D G PQPYPPKTDSW N TS+ V I+SFRD RC KTL+N+++KA++P+R++AGVVQQN GDV CL YCE + + G +A AADP CP+ V++L V A +A GP +GR+L + + DEEFCMQ D+HMD+ D WD ++ W A NEY L+TYV +D L N+NG EV +C + +T +M Sbjct: 53 DAGVPQPYPPKTDSWTLNDTSIMVSISSFRDYRCPKTLYNLFTKAANPDRVYAGVVQQNNAGDVDCLNDYCEKIKEERGIGPDASAADPNLRITQNCPHADQVKMLRVQAEDAKGPTYGRYLGSYLVGDEEFCMQIDAHMDFEDHWDKQLLDMWGLANNEYGVLTTYVPNLDQLHVNLNGRFEVPQVCRVTYTPGEKM 250
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: A0A7S2UY74_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY74_9STRA) HSP 1 Score: 183 bits (465), Expect = 5.990e-55 Identity = 89/201 (44.28%), Postives = 124/201 (61.69%), Query Frame = 1 Query: 67 GKPQPYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQNEPGDVGCLERYCELMTQTGT-----------------AAEAAADP---CPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDEEFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDLGKNINGHHEVSHLCELLF 609 G P+PY PK +S+ D +++VGIA++RD RC KTL+NM++KA +P+R+ G+V QN+ D C+E YC+LM A+A AD CP+ ++V V A GP +GRHLQ + DEEFCMQ+DSHMDY D WD M+ +W NEYA ++TYV ++DL +NING +EV HLC++ F Sbjct: 3 GHPRPYAPKDESYKDPDKTIFVGIAAYRDTRCAKTLYNMFTKAKYPDRLRIGLVWQNDVTDADCVEGYCKLMGHDPNPAGPPKKAPVAGLPPEPGAQADADMSRNCPHFHQIKVHRVTHKLAVGPTFGRHLQSNMIEDEEFCMQSDSHMDYVDHWDEKMVEQWGMTENEYAVITTYVNRLEDLNRNINGRYEVPHLCQMEF 203
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Match: A0A835ZER6_9STRA (GlcNAc-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER6_9STRA) HSP 1 Score: 179 bits (453), Expect = 3.170e-50 Identity = 85/194 (43.81%), Postives = 120/194 (61.86%), Query Frame = 1 Query: 43 WVPVEKDYGKPQPYPPKTDSWADNATSLWVGIASFRDARCGKTLFNMYSKASHPERIFAGVVQQNEPG-DVGCLERYCELMTQTGTAAEAAADPCPYKSNVRVLAVDAAEAAGPCWGRHLQYFTLRDEEFCMQTDSHMDYADGWDIAMMREWAAAGNEYAFLSTYVQGMDDLG---KNINGHHEVSHLCELLFT 612 W + D P+P+PP ++S+ D ++++G+++FRD RC KTL+N +SKA +P R+ G+VQQN D CL+ YC+LM A D CPYK +++ V+A AAGPC+GRH+Q + LRDEEFCMQTDSHMD WD M W NEY L+TYV + +G + + + V HLC++ FT Sbjct: 15 WNALVDDDSLPKPHPPHSESYKDPNATIFIGVSAFRDKRCPKTLYNYFSKAKNPHRLRVGLVQQNSISEDPDCLQGYCDLMKADEKFATKFGDKCPYKEQIKITRVEAKLAAGPCYGRHMQSYMLRDEEFCMQTDSHMDVVPEWDEEMAAMWGRTENEYGVLTTYVHVKESIGTLEQAKDRNKLVPHLCQVSFT 208 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10114.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10114.1.1 >prot_P-wetherbeei_contig10114.1.1 ID=prot_P-wetherbeei_contig10114.1.1|Name=mRNA_P-wetherbeei_contig10114.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=209bp VKIGEYYDGHTARDWVPVEKDYGKPQPYPPKTDSWADNATSLWVGIASFRback to top mRNA from alignment at P-wetherbeei_contig10114:1390..2016+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10114.1.1 ID=mRNA_P-wetherbeei_contig10114.1.1|Name=mRNA_P-wetherbeei_contig10114.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig10114:1390..2016+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10114:1390..2016+ >mRNA_P-wetherbeei_contig10114.1.1 ID=mRNA_P-wetherbeei_contig10114.1.1|Name=mRNA_P-wetherbeei_contig10114.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig10114:1390..2016+ (Phaeothamnion wetherbeei SAG_119_79)back to top |