mRNA_P-wetherbeei_contig10106.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10106.2.1
Unique NamemRNA_P-wetherbeei_contig10106.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: A0A7X8XPY7_9BURK (ABC transporter ATP-binding protein n=2 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XPY7_9BURK)

HSP 1 Score: 586 bits (1510), Expect = 1.420e-203
Identity = 297/478 (62.13%), Postives = 374/478 (78.24%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTATGVYTQLADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            VF HLQRL ++F+D MRLGEI SRAS D++ +T +Y  L+DF+ N L+VV  + WM Y DW+MT +VLL+SPL+G AV +FG R+G+ +EK+Q+R ADL+A+ YE++S IKVVKAY REDFE+ RF+ +NE+N+  QM LV+V A Q PVVE LGA GIVAIVWFGA R+M   V F+QMTEYWTL+VMT+ PISALSGFY +  ++AAA +RVF I+D   E A      ELP ++G I F+ V F YDPE P+L  ++L I PG+VVA+VG NGAGKTTL+N++ RFY+P+SG+V +DGHDLK VKL S+R QIG VIQESVLF GTI +NI C +     E    VL A++LANA +FI+R+P+GY T+VGERG RLSGGQRQRIAIARAL RDPRIL+LDE+TS +DAESEN I DA+ ++M GRTCLVIAHRLNTIRHA RILVM  GQIVE+G H++LMAR+  Y+R+Y AQ
Sbjct:  109 VFSHLQRLPMAFFDSMRLGEIHSRASNDILLSTTIYMALSDFIKNLLVVVACLTWMFYRDWQMTLVVLLISPLVGTAVANFGKRMGQRSEKLQARLADLSALLYENISTIKVVKAYTREDFETRRFACRNEDNFAAQMKLVQVSAIQSPVVELLGAFGIVAIVWFGATRVMQGQVTFAQMTEYWTLMVMTSHPISALSGFYGTANSAAAAGRRVFEIMDMTPEVAEPEGALELPRLQGAIDFESVHFHYDPEKPVLRGINLSIRPGEVVAVVGGNGAGKTTLVNMIPRFYDPVSGSVKVDGHDLKEVKLRSLRTQIGTVIQESVLFGGTIDDNIRCGNPTATDEE---VLRASKLANAHEFIERMPDGYQTEVGERGLRLSGGQRQRIAIARALLRDPRILILDEYTSGIDAESENLIADAIARAMEGRTCLVIAHRLNTIRHADRILVMAAGQIVEEGRHDQLMARNGIYSRLYEAQ 583          
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: A0A355TP46_9BACT (ABC transporter ATP-binding protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TP46_9BACT)

HSP 1 Score: 489 bits (1259), Expect = 1.840e-164
Identity = 249/478 (52.09%), Postives = 348/478 (72.80%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTATGVYTQLADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            VF  LQRL + F+DKMR GE+ SR++ DV+TA+GV+  L++F  N L+V+    WM + DW+MT +VLL+SP++  A+ +FG ++G+ T K+Q+R ADL+A+ +E++S IKVVKA  RED+E  RF  +NE+NY  QM +V+VQ+ Q PVVEFLG +GI+ IVWFGA RI+   V FSQMTEYW L+ MT+ P+S LS FY S Q SAAAA R F I+D+  E +   +  +LP V+G I F+ V+F Y+ + P+L+ ++L I PG+ VAIVG NG+GK+TL+N++ RFY P SG + IDG+D+  V L+S+R QIG+V QES+LF  TI EN+   +      S   +  A  ++ AD+FI + PEG +T VGERG+ LSGGQRQR+A+ARAL  +P IL+LDE+TS +DA +E+ +T+ +++SM+GRTCLVIAHRL TIRHA RI+VM  G+I E+GSH ELMA++  Y +I+  Q
Sbjct:  203 VFCSLQRLPIKFFDKMRSGEVLSRSTTDVITASGVFGLLSEFTKNSLMVIGCFVWMFWRDWQMTIVVLLISPMVAIAISNFGAKIGQKTSKLQARLADLSALQFENVSAIKVVKANSREDYEYKRFLNRNEDNYAAQMKVVQVQSLQAPVVEFLGIIGIIIIVWFGATRILQGQVSFSQMTEYWALMAMTSHPLSVLSTFYGSCQNSAAAAVRAFEIIDSAPETSSP-DAIKLPPVKGKIEFENVSFAYEEDKPVLDKVNLKIKPGEFVAIVGTNGSGKSTLVNMLERFYAPDSGKIKIDGYDISKVTLDSLRSQIGIVFQESILFRDTIYENVRYGNL---NASDAEIKEAITMSGADEFIAKFPEGLNTNVGERGSALSGGQRQRLAVARALVHNPHILILDEYTSGLDANAESNLTEVIDRSMKGRTCLVIAHRLATIRHADRIVVMNAGKIAEEGSHSELMAKNGLYRQIFETQ 676          
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: A0A498RGP6_9FIRM (Abc transporter n=1 Tax=Lucifera butyrica TaxID=1351585 RepID=A0A498RGP6_9FIRM)

HSP 1 Score: 416 bits (1070), Expect = 2.270e-137
Identity = 210/479 (43.84%), Postives = 322/479 (67.22%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTA-TGVYTQLADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            +++HLQRLSLS+++K + G I S  + DV    + +   + + +T    ++ +M  M Y DWK++ +  +  PL+   +  FG +V R +   Q R AD+ A+  E++S ++V+K++GRE++E  RF  +N  N++ QM + ++ A   P++EFL ALG+  IVWFG   ++   +    +  Y   +V  + P+  LS  Y + Q + AAA+R+F ++DT  E  +     ELPA+ G++ F +V F Y     +L+D++L   PGQ++AIVG +GAGKTT+ NL+ RFY+P  GT+ IDG D+KTV L+S+RRQIG+V QE+VLF GT+ ENI   D    + +R+ V+TAAQ ANA +FI  +P+GY+TQ+GERG++LSGGQRQRIAIARA+ ++PR+L+LDE TS +D ESE  + +AL+K M GRT  VIAHRL+T++ A  ILVME+G+I+E+G+H+EL+A    Y+++Y  Q
Sbjct:   95 IYRHLQRLSLSYFEKRQTGVIMSYITNDVAAVQSALVDNVIELVTEATTLIGSMAAMFYLDWKLSLLTFITMPLVAQTINIFGGKVKRASTNNQERIADITAVLQEAISAVRVIKSFGREEYEIERFGRENYSNFRAQMKIAQLMATLTPLIEFLAALGVTVIVWFGGREVITGHLTTGSLMAYLIYIVNLSNPMKRLSRVYGNIQRAMAAAERIFAVLDTEPEIQNLPEAVELPAITGHVAFQQVDFAYRTGERVLHDINLEAKPGQMIAIVGPSGAGKTTIANLIPRFYDPSGGTIRIDGLDIKTVTLQSLRRQIGIVPQETVLFNGTVYENILYGDL---EATREEVITAAQAANAHNFITGMPDGYETQIGERGSKLSGGQRQRIAIARAILKNPRVLILDEATSALDTESEKLVQEALDKLMIGRTSFVIAHRLSTVQRADTILVMEKGKIIERGTHQELLAAGGLYSKLYQVQ 570          
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: A0A212M1Q0_9FIRM (Lipid A export ATP-binding/permease protein MsbA n=3 Tax=Sporomusa TaxID=2375 RepID=A0A212M1Q0_9FIRM)

HSP 1 Score: 416 bits (1069), Expect = 3.020e-137
Identity = 210/479 (43.84%), Postives = 316/479 (65.97%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTATGVYTQ-LADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            +++H QRLSLS+++K + G I S  + DV        + + + +T   +++ +M  M Y  WK+  + L+  PL+  A+  FG R+   +   Q RAAD+ ++  E++S ++V+K++ RE++E GRF+ +N  N++ QM   ++ A   P++EFLGA+G+  I+W+G   ++Y  +    +  +   +V  T PI  LS  YS+ Q + AAAQRVF ++DT  E        ELP + G + F++V F Y P    L D+ L + PGQ+VAIVG +GAGKTT+ NL+ RFY+PMSG ++IDG+D+KTV L S+R QIG+V QE+VLF G++ ENI   D    K     ++ AA+ ANA +FIK +PEGY+TQ+GERG++LSGGQRQRIAIARA+ +DPR+L+LDE TS +D ESE  + DAL+K M  RT  VIAHRL+T++ A  ILVM++G+I+E+G HE+L+     Y+++Y  Q
Sbjct:   95 LYRHFQRLSLSYFEKRQTGSIMSYVTNDVAALQNALVESVIELVTESAILIGSMAAMFYIHWKLALLTLITMPLVAQAINIFGKRLRTASRITQERAADITSVLQETISAVRVIKSFVREEYEIGRFNRENYSNFRAQMKTAQLSATLTPIIEFLGAIGVTLIIWYGGREVIYGNLSSGALIAFLIYVVNITNPIKRLSRVYSNIQRALAAAQRVFDVLDTEPEIKDMPGAKELPRITGRLTFEQVNFSYKPGEMALADVSLTVEPGQMVAIVGPSGAGKTTIANLIPRFYDPMSGRITIDGYDIKTVTLASLREQIGIVPQETVLFNGSVYENILYGDL---KAGEAAIIAAAKAANAHEFIKGMPEGYNTQIGERGSKLSGGQRQRIAIARAILKDPRVLILDEATSALDTESEKLVQDALDKLMVNRTSFVIAHRLSTVQRADIILVMDKGRIIERGIHEQLLTAGGLYSKLYQVQ 570          
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: A0A1W1YRH1_9FIRM (ATP-binding cassette, subfamily B, MsbA n=1 Tax=Sporomusa malonica TaxID=112901 RepID=A0A1W1YRH1_9FIRM)

HSP 1 Score: 415 bits (1067), Expect = 6.050e-137
Identity = 214/479 (44.68%), Postives = 314/479 (65.55%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTATGVYTQ-LADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            V++HLQRLSLS+Y+K + G I S  + DV        + + + +T   +++ +MG M Y  WK++ +  +  PL+  A+  FG R+   +   Q RAAD+ ++  E++S ++V+K++ RED+E  RFS +N  N++ QM   ++ A   P+VEFLGA+G+  I+W+G   ++   +    +  +   +V  T PI  LS  Y + Q + AAAQRVF ++DT  E         LP + G + FD V F Y P    L D+ LV   GQ++AIVG +GAGKTT+ NL+ RFYNP SG ++IDG+D+KTV L+S+R QIG+V QE+VLF G++ +NI   D    KE    ++ AA+ ANA DFI  +PE Y+TQ+GERG++LSGGQRQR+AIARA+ +DPR+L+LDE TS +DAESE  + +AL+K M GRT  VIAHRL+T++ A  ILVME+G+I+E+GSH EL+A    Y+++Y  Q
Sbjct:   95 VYRHLQRLSLSYYEKRQTGSIMSYITNDVAALQNALVESVIELVTESAVLIGSMGAMFYIHWKLSLLTFITLPLVAQAISIFGKRLRTASRVTQERAADITSVLQETISAVRVIKSFVREDYEISRFSRENYSNFRAQMKTAQLSATLTPIVEFLGAIGVTIIIWYGGREVINGSLTAGSLIAFLIYVVNITNPIKRLSRVYGNIQRALAAAQRVFDVLDTEPEIQDMPGAKALPPITGRVAFDHVNFSYKPGEVALADVSLVAEAGQMIAIVGPSGAGKTTIANLIPRFYNPESGLIAIDGYDIKTVTLKSLREQIGIVPQETVLFNGSVYDNILYGDLDAGKEE---IIAAAKAANAHDFIMAMPEQYNTQIGERGSKLSGGQRQRVAIARAILKDPRVLILDEATSALDAESEKLVQEALDKLMVGRTSFVIAHRLSTVQRADTILVMEKGRIIERGSHTELVAAGGLYSKLYQVQ 570          
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: A0A402BRG4_9FIRM (Multidrug ABC transporter ATP-binding protein n=1 Tax=Sporomusaceae bacterium TaxID=1917525 RepID=A0A402BRG4_9FIRM)

HSP 1 Score: 415 bits (1067), Expect = 6.240e-137
Identity = 212/479 (44.26%), Postives = 316/479 (65.97%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTATGVYTQ-LADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            ++ HLQRLSLS+Y+K + G I S  + DV    G   + + + +T   +++ ++G M Y  WK++ + L+ +PL+ Y +  FG ++   +  +Q RAAD+ ++  E++S ++VVK++ RED+E  RF  +N  N++ QM   ++ A   PV+EFL A+G+  I+W+G + ++   +    +  +    V  + PI  LS  Y++ Q + AAA+RVF ++DT  E        ELP++ G + FD +TF Y P  P+L+ + L   PGQ+VAIVG +GAGKTT+ NL+ RFY P  G +SIDG D+KTV L+S+R+QIG+V QE+VLF GT+ ENI   D      + D V+ AAQ ANA  FI  +PEGY+TQ+GERG++LSGGQRQRIAIARA+ ++PR+L+LDE TS +D ESE  + +AL+K M  RT  VIAHRL+T+  A  ILVMERG+IVE+G+H EL+A    Y++++  Q
Sbjct:   95 IYGHLQRLSLSYYEKRQTGTIMSYITNDVAALQGALVESIIELVTELSVLLGSVGMMFYLHWKLSALTLITTPLVAYTMNIFGKKLRSTSTVMQERAADITSVLQETISAVRVVKSFVREDYEVERFGKENFSNFRAQMKNAQLMATLTPVIEFLAAIGVTVIIWYGGWEVINGNLTAGALIAFLVYAVNLSNPIKRLSRVYANIQRALAAAERVFVVLDTEPEIQDIPGAVELPSIHGEVAFDDITFEYKPGEPVLSHVSLTAKPGQMVAIVGPSGAGKTTIANLIPRFYEPTQGHISIDGIDIKTVTLDSLRKQIGIVPQETVLFNGTVYENILYGDL---DATHDEVIAAAQAANAHKFIMAMPEGYETQIGERGSKLSGGQRQRIAIARAILKNPRVLILDEATSALDTESEKLVQEALDKLMISRTSFVIAHRLSTVLRADLILVMERGKIVERGTHTELLAMGGLYSKLHEVQ 570          
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: A0A075KNF5_9FIRM (Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Pelosinus sp. UFO1 TaxID=484770 RepID=A0A075KNF5_9FIRM)

HSP 1 Score: 410 bits (1053), Expect = 7.510e-135
Identity = 208/479 (43.42%), Postives = 320/479 (66.81%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTATGVYTQ-LADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            V++HLQRLSLS+Y+K + G+I S  + DV    G   + + + +T  + ++ ++G M Y  WK++ + L+  PL+G A+  FG ++ + +  +Q RAAD+ ++  ES+S+++V+K++ RED+E  RFS +N+ N++ QM   ++ A   PV+EFL A+G+  I+W+G   ++ D +    +  +    V  + PI  LS  Y + Q + AAA+RVF ++DT  E     N   LP + G +  ++VTF Y    P L  ++L I PGQVVAIVG +GAGKTT+ N++ RFY+P  G ++IDG D+KTV L S+R QIG+V QE++LF G++ ENI          ++D V+ AA+ ANA +FI  +P GYDTQ+GERG++LSGGQRQRI+IARA+ ++PR+L+LDE TS +D ESE  + +A++K M GRT  VIAHRL+TI+ A  I+VME+G+I E+G+H+EL+A    Y+++Y  Q
Sbjct:   95 VYRHLQRLSLSYYEKRQTGKIMSYITNDVAAVQGALVETMIELVTEGMTLIGSLGAMFYLHWKLSLLTLVTLPLVGQAINVFGKKLRKSSTAVQERAADITSVLQESISSVRVIKSFAREDYEIARFSRENDHNFRAQMKNSQIMATLTPVIEFLAAIGVTMIIWYGGREVINDNLTAGSLVAFLVYAVNLSNPIKRLSRVYGNIQKALAAAERVFEVLDTKPEIEDMPNAIPLPNINGYVALNQVTFEYKQGEPALRQVELKINPGQVVAIVGPSGAGKTTIANMIPRFYDPTDGNITIDGIDIKTVTLHSLREQIGIVPQETILFNGSVYENILYGKL---DATQDEVVQAAKAANAHNFILDMPGGYDTQIGERGSKLSGGQRQRISIARAILKNPRVLILDEATSALDTESEKLVQEAIDKLMIGRTSFVIAHRLSTIQRADLIVVMEKGRIKEKGTHKELLAAGGLYSKLYQVQ 570          
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: A0A259UME8_9FIRM (Putative multidrug export ATP-binding/permease protein n=1 Tax=Sporomusa acidovorans DSM 3132 TaxID=1123286 RepID=A0A259UME8_9FIRM)

HSP 1 Score: 409 bits (1050), Expect = 2.190e-134
Identity = 212/479 (44.26%), Postives = 311/479 (64.93%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTA-TGVYTQLADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            V++HLQRLSLS+Y+K + G I SR + DV      +   + +  T  ++++ +M  M Y  W+++ +  +  PL+  A+  FG R+   +  +Q R AD+ ++  E++S ++V+K++GRED+E  RF+ +N  N++ QM   ++ A   PV+EFL A+GI  I+W+G   ++   +    +  +    V  + P+  LS  Y + Q + AAAQRVF ++DT  E        +LP + G +VF+ V F Y P    L ++ LV  PGQ++AIVG +GAGKTT+ NLV RFY+P  G + IDG+D+K V L+S+R QIG+V QE+VLF GT+ ENI   D    KE   +V+ AAQ ANA DFI  +P GY+TQ+GERG++LSGGQRQRIAIARA+ +DPR+L+LDE TS +D ESE  +  AL+K M  RT  VIAHRL+T++ AH ILV++RGQI+E GSH EL+A    Y+++Y  Q
Sbjct:   95 VYRHLQRLSLSYYEKRQTGAIMSRITNDVAALQNALVDSVIELFTEGMVLIGSMATMFYLHWRLSLLTFIALPLVAQAINIFGKRLRTSSRIMQERVADITSVLQETISAVRVIKSFGREDYEIARFNRQNHLNFRAQMKNAQIMATLTPVIEFLAAIGITLIIWYGGREVINGSLTSGSLIAFLIYAVNISNPVKRLSRVYGNIQRALAAAQRVFDVLDTEPEIQDIPGAVDLPPITGRVVFENVNFSYKPGEQALKNVSLVAEPGQMIAIVGPSGAGKTTIANLVPRFYDPTDGRILIDGYDIKQVTLKSLRTQIGIVPQETVLFNGTVYENILYGDLDAGKE---QVIAAAQAANAHDFIMAMPAGYETQIGERGSKLSGGQRQRIAIARAILKDPRVLILDEATSALDTESEKLVQAALDKLMIDRTSFVIAHRLSTVQRAHVILVIDRGQIIECGSHAELVAAGGLYSKLYQVQ 570          
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: A0A259UR80_9FIRM (Putative multidrug export ATP-binding/permease protein n=3 Tax=Sporomusa TaxID=2375 RepID=A0A259UR80_9FIRM)

HSP 1 Score: 408 bits (1048), Expect = 4.380e-134
Identity = 214/479 (44.68%), Postives = 314/479 (65.55%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTA-TGVYTQLADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            V++HLQRLSLS+Y+K + G I S  + DV      +   + +  T  + ++ +M  M Y  WK++ +  +  PL+  A+  FG R+   +  +Q RAAD+ ++  E+++ ++V+K++ RED+E GRF+ +N  N++ QM   ++ A   PVVEFL A+GI  I+W+G   ++   +    +  +    V  + PI  LS  Y + Q + AAAQRVF ++DT  E        ELP + G + F+ V F Y P  P L+ + LV   GQ++AIVG +GAGKTT+ NL+ RFY+P SG ++IDG+D+KTV L S+R QIG+V QE+VLF G++ ENI   D A    ++D+V+ AAQ ANA +FI  +PE YDTQ+GERG++LSGGQRQRIAIARA+ +DPR+L+LDE TS +D ESE  +  AL+K M GRT  VIAHRL+T++ A  ILV+E+GQI+E GSH EL+A  + Y+++Y  Q
Sbjct:   95 VYRHLQRLSLSYYEKRQTGAIMSHITNDVAALQNALVDSVIELFTEGMTLLGSMAAMFYLHWKLSLLTFIALPLVAQAIRIFGKRLRISSRVMQERAADITSVLQETIAAVRVIKSFVREDYEIGRFNRENYSNFRAQMKTAQIMATLTPVVEFLVAIGITVIIWYGGTEVINGSLTAGSLIAFLIYAVNISNPIKRLSRVYGNIQRALAAAQRVFDVLDTVPEIQDLPGARELPRITGRVAFENVDFSYKPGEPALSSVSLVAEIGQMIAIVGPSGAGKTTIANLIPRFYDPTSGRITIDGYDIKTVTLNSLREQIGIVPQETVLFNGSVYENILYGDLAA---NKDQVIAAAQAANAHEFIMAMPERYDTQIGERGSKLSGGQRQRIAIARAILKDPRVLILDEATSALDTESEKLVQGALDKLMVGRTSFVIAHRLSTVQRADVILVIEKGQIIECGSHTELVAAGSLYSKLYQVQ 570          
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Match: UPI00198CEFE5 (Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Sporomusaceae bacterium TaxID=1917525 RepID=UPI00198CEFE5)

HSP 1 Score: 407 bits (1045), Expect = 1.240e-133
Identity = 208/481 (43.24%), Postives = 322/481 (66.94%), Query Frame = 1
Query:    1 VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTATGVYTQ-LADFLTNFLLVVMAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLAAITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPVVEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGFYSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYDPENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSIDGHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACS--DAAGAKESRDRVLTAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRILLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVMERGQIVEQGSHEELMARDANYARIYMAQ 1434
            V++H+QRLSL++++K R G+I S  + DV    G     + + +T  + ++ ++  M Y  W+++ + L+ +PL+G  +  FG ++ + +  IQ RAAD+ ++  ES+S+++V+K++ RE+FE  RF+ +N +N++ QM   ++ A   P++EFL A+G+ AI+W+G   ++   +    +  +    V  + PI  LS  Y + Q + AAA+RVF ++DT  E         L  ++G + F+ VTF Y P  P L+ + L + PGQVVAIVG +GAGKTT+ NL+ RFY+P +G ++IDG D+KTV ++S+R QIG+V QE++LF G++  NI     DAA      D V+ AA+ ANA  FI  +PEGYDTQ+GERG++LSGGQRQRI+IARA+ ++PRIL+LDE TS +D ESE  + +A++K M GRT  VIAHRL+TI+ AH I+VMERG++VEQG+H+EL+A    Y+++Y  Q
Sbjct:   95 VYRHIQRLSLAYFEKRRTGQIMSFITNDVAAVQGALVDSMIELVTEGMTLLGSLAIMFYLHWQLSLLTLVTAPLVGQTMNVFGKKLRKSSANIQERAADITSVLQESISSVRVIKSFAREEFEIERFTKENHQNFRAQMKNSQIMATLTPLIEFLAAIGVTAIIWYGGREVINGNLTAGSLIAFLVYAVNLSNPIKRLSRVYGNIQKALAAAERVFDVLDTQPEIEDMPGAKILAKIDGRVEFNHVTFEYKPGEPALHQVQLTVEPGQVVAIVGPSGAGKTTIANLLPRFYDPSAGEITIDGIDIKTVTMKSLREQIGIVPQETILFNGSVYSNILYGRLDAA-----YDEVINAAKAANAHQFITDMPEGYDTQIGERGSKLSGGQRQRISIARAILKNPRILILDEATSALDTESEKLVQEAVDKLMVGRTSFVIAHRLSTIKRAHVIIVMERGRLVEQGTHDELLALGGLYSKLYQVQ 570          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10106.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XPY7_9BURK1.420e-20362.13ABC transporter ATP-binding protein n=2 Tax=Burkho... [more]
A0A355TP46_9BACT1.840e-16452.09ABC transporter ATP-binding protein n=1 Tax=bacter... [more]
A0A498RGP6_9FIRM2.270e-13743.84Abc transporter n=1 Tax=Lucifera butyrica TaxID=13... [more]
A0A212M1Q0_9FIRM3.020e-13743.84Lipid A export ATP-binding/permease protein MsbA n... [more]
A0A1W1YRH1_9FIRM6.050e-13744.68ATP-binding cassette, subfamily B, MsbA n=1 Tax=Sp... [more]
A0A402BRG4_9FIRM6.240e-13744.26Multidrug ABC transporter ATP-binding protein n=1 ... [more]
A0A075KNF5_9FIRM7.510e-13543.42Lipid A ABC exporter, fused ATPase and inner membr... [more]
A0A259UME8_9FIRM2.190e-13444.26Putative multidrug export ATP-binding/permease pro... [more]
A0A259UR80_9FIRM4.380e-13444.68Putative multidrug export ATP-binding/permease pro... [more]
UPI00198CEFE51.240e-13343.24Lipid A export permease/ATP-binding protein MsbA n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10106contigP-wetherbeei_contig10106:968..2401 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1123288.SOV_3c03700
Preferred namemsbA
PFAMsABC_membrane,ABC_tran
Model size1434
Max annot lvl909932|Negativicutes
KEGG koko:K11085
KEGG TC3.A.1.106
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.35e-136
EggNOG OGsCOG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4H20M@909932|Negativicutes
Descriptionlipid A export permease ATP-binding protein MsbA
Cds size1434
COG categoryV
BRITEko00000,ko00001,ko01000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185854.8988838-CDS-P-wetherbeei_contig10106:967..24011683185854.8988838-CDS-P-wetherbeei_contig10106:967..2401Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10106 968..2401 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10106.2.1prot_P-wetherbeei_contig10106.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10106 968..2401 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10106.2.1

>prot_P-wetherbeei_contig10106.2.1 ID=prot_P-wetherbeei_contig10106.2.1|Name=mRNA_P-wetherbeei_contig10106.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=478bp
VFQHLQRLSLSFYDKMRLGEIQSRASGDVMTATGVYTQLADFLTNFLLVV
MAMGWMVYHDWKMTGMVLLLSPLIGYAVGHFGTRVGRITEKIQSRAADLA
AITYESLSNIKVVKAYGREDFESGRFSVKNEENYQTQMGLVKVQAAQVPV
VEFLGALGIVAIVWFGAYRIMYDGVQFSQMTEYWTLLVMTTQPISALSGF
YSSFQASAAAAQRVFYIVDTPSEAAHELNYPELPAVEGNIVFDKVTFGYD
PENPILNDLDLVIPPGQVVAIVGANGAGKTTLMNLVSRFYNPMSGTVSID
GHDLKTVKLESVRRQIGVVIQESVLFAGTIAENIACSDAAGAKESRDRVL
TAAQLANADDFIKRLPEGYDTQVGERGARLSGGQRQRIAIARALFRDPRI
LLLDEFTSNVDAESENAITDALEKSMRGRTCLVIAHRLNTIRHAHRILVM
ERGQIVEQGSHEELMARDANYARIYMAQ
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mRNA from alignment at P-wetherbeei_contig10106:968..2401-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10106.2.1 ID=mRNA_P-wetherbeei_contig10106.2.1|Name=mRNA_P-wetherbeei_contig10106.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1434bp|location=Sequence derived from alignment at P-wetherbeei_contig10106:968..2401- (Phaeothamnion wetherbeei SAG_119_79)
GTATTCCAACATCTGCAGCGCCTCTCGTTGAGTTTCTACGACAAGATGCG TCTGGGCGAGATCCAGAGCCGCGCCTCCGGCGACGTGATGACCGCGACCG GCGTCTACACGCAACTCGCAGACTTCCTCACCAATTTCCTGCTCGTCGTT ATGGCGATGGGTTGGATGGTTTACCACGACTGGAAGATGACCGGCATGGT CTTGCTGCTGAGTCCACTGATCGGCTACGCGGTAGGGCATTTCGGCACTC GCGTGGGACGCATCACGGAGAAAATTCAGTCGCGCGCGGCCGATCTCGCC GCCATCACCTACGAGAGCCTCTCCAACATCAAAGTCGTCAAGGCCTACGG CCGCGAAGATTTCGAGAGCGGCCGCTTCAGCGTCAAAAACGAAGAGAACT ACCAGACCCAGATGGGCCTGGTCAAAGTTCAGGCCGCTCAGGTGCCTGTC GTGGAATTTCTGGGCGCTCTGGGCATCGTGGCCATTGTGTGGTTCGGCGC CTACCGAATCATGTATGACGGAGTCCAGTTCAGTCAGATGACCGAATATT GGACTCTGCTGGTCATGACCACGCAGCCCATCAGCGCTCTTTCGGGCTTT TACTCGAGCTTCCAGGCCTCCGCCGCCGCCGCTCAGCGCGTGTTCTACAT CGTGGACACACCGTCTGAGGCCGCTCACGAACTCAATTACCCCGAGCTGC CCGCGGTCGAAGGCAACATCGTCTTCGACAAGGTAACCTTCGGCTACGAT CCCGAGAATCCGATTCTCAACGATCTCGACCTGGTGATCCCACCCGGCCA GGTGGTGGCTATTGTGGGCGCCAATGGCGCAGGCAAGACCACTCTGATGA ACCTGGTCTCGCGCTTCTACAATCCGATGTCGGGCACCGTCAGCATCGAT GGCCATGATCTCAAGACCGTCAAGCTCGAGAGCGTACGTCGCCAGATCGG CGTTGTGATTCAGGAGTCGGTGCTCTTTGCCGGAACCATCGCCGAAAACA TCGCCTGCAGCGATGCCGCGGGGGCCAAGGAATCGCGCGACCGCGTGCTG ACCGCAGCCCAGTTGGCCAACGCCGACGACTTCATCAAGCGCCTTCCCGA AGGCTATGATACGCAGGTTGGCGAGCGCGGAGCCCGCCTCTCGGGCGGTC AGCGCCAGCGCATCGCCATCGCCCGCGCCCTCTTCCGCGATCCCCGCATT CTCTTGCTCGACGAGTTCACGTCCAACGTCGACGCCGAGTCCGAGAACGC CATCACCGACGCTTTGGAAAAGAGCATGCGTGGCCGCACGTGCCTCGTGA TCGCCCACCGCCTCAACACCATCCGCCACGCCCACCGCATCCTGGTCATG GAACGCGGCCAGATCGTCGAACAAGGCTCCCATGAAGAGCTCATGGCCCG CGACGCCAACTACGCCCGCATCTACATGGCCCAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10106:968..2401-

>mRNA_P-wetherbeei_contig10106.2.1 ID=mRNA_P-wetherbeei_contig10106.2.1|Name=mRNA_P-wetherbeei_contig10106.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1434bp|location=Sequence derived from alignment at P-wetherbeei_contig10106:968..2401- (Phaeothamnion wetherbeei SAG_119_79)
GTATTCCAACATCTGCAGCGCCTCTCGTTGAGTTTCTACGACAAGATGCG
TCTGGGCGAGATCCAGAGCCGCGCCTCCGGCGACGTGATGACCGCGACCG
GCGTCTACACGCAACTCGCAGACTTCCTCACCAATTTCCTGCTCGTCGTT
ATGGCGATGGGTTGGATGGTTTACCACGACTGGAAGATGACCGGCATGGT
CTTGCTGCTGAGTCCACTGATCGGCTACGCGGTAGGGCATTTCGGCACTC
GCGTGGGACGCATCACGGAGAAAATTCAGTCGCGCGCGGCCGATCTCGCC
GCCATCACCTACGAGAGCCTCTCCAACATCAAAGTCGTCAAGGCCTACGG
CCGCGAAGATTTCGAGAGCGGCCGCTTCAGCGTCAAAAACGAAGAGAACT
ACCAGACCCAGATGGGCCTGGTCAAAGTTCAGGCCGCTCAGGTGCCTGTC
GTGGAATTTCTGGGCGCTCTGGGCATCGTGGCCATTGTGTGGTTCGGCGC
CTACCGAATCATGTATGACGGAGTCCAGTTCAGTCAGATGACCGAATATT
GGACTCTGCTGGTCATGACCACGCAGCCCATCAGCGCTCTTTCGGGCTTT
TACTCGAGCTTCCAGGCCTCCGCCGCCGCCGCTCAGCGCGTGTTCTACAT
CGTGGACACACCGTCTGAGGCCGCTCACGAACTCAATTACCCCGAGCTGC
CCGCGGTCGAAGGCAACATCGTCTTCGACAAGGTAACCTTCGGCTACGAT
CCCGAGAATCCGATTCTCAACGATCTCGACCTGGTGATCCCACCCGGCCA
GGTGGTGGCTATTGTGGGCGCCAATGGCGCAGGCAAGACCACTCTGATGA
ACCTGGTCTCGCGCTTCTACAATCCGATGTCGGGCACCGTCAGCATCGAT
GGCCATGATCTCAAGACCGTCAAGCTCGAGAGCGTACGTCGCCAGATCGG
CGTTGTGATTCAGGAGTCGGTGCTCTTTGCCGGAACCATCGCCGAAAACA
TCGCCTGCAGCGATGCCGCGGGGGCCAAGGAATCGCGCGACCGCGTGCTG
ACCGCAGCCCAGTTGGCCAACGCCGACGACTTCATCAAGCGCCTTCCCGA
AGGCTATGATACGCAGGTTGGCGAGCGCGGAGCCCGCCTCTCGGGCGGTC
AGCGCCAGCGCATCGCCATCGCCCGCGCCCTCTTCCGCGATCCCCGCATT
CTCTTGCTCGACGAGTTCACGTCCAACGTCGACGCCGAGTCCGAGAACGC
CATCACCGACGCTTTGGAAAAGAGCATGCGTGGCCGCACGTGCCTCGTGA
TCGCCCACCGCCTCAACACCATCCGCCACGCCCACCGCATCCTGGTCATG
GAACGCGGCCAGATCGTCGAACAAGGCTCCCATGAAGAGCTCATGGCCCG
CGACGCCAACTACGCCCGCATCTACATGGCCCAA
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