mRNA_P-wetherbeei_contig10102.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10102.1.1
Unique NamemRNA_P-wetherbeei_contig10102.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: A0A525JQ99_BRASZ (Acryloyl-CoA reductase n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525JQ99_BRASZ)

HSP 1 Score: 406 bits (1043), Expect = 3.230e-140
Identity = 206/263 (78.33%), Postives = 231/263 (87.83%), Query Frame = 1
Query:    1 MSPFKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALATPLFAGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            M  FKAFRVHTIDGKPVCRFE+LTL++LD G VVIK A+SAITYKDAMAARGVGKNVRTDRPCVTGVDLSG VVSS DARF  GD V VTNYKLG  QDG YAEYARVP DWIVPLPAGLSLYEAMGLGTSGLTAALAVDRL+ AG+ PQ G V I+GATGGVGSLA++MFA+ G+ V+AISGKR+QE F+++IGA  +++RED L DRA LA PLFA ALDNVGG+YFDRLAA++QPFGK+AVAGMAVGAE+ TTVLP +LR
Sbjct:    1 MDKFKAFRVHTIDGKPVCRFERLTLDDLDKGDVVIKTAFSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGVVVSSADARFHAGDQVIVTNYKLGTTQDGAYAEYARVPGDWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLQKAGVKPQDGPVAISGATGGVGSLAIDMFAKLGFNVVAISGKREQEGFLRTIGAHRIMSREDLLGDRAPLAPPLFAAALDNVGGIYFDRLAARLQPFGKLAVAGMAVGAELKTTVLPWVLR 263          
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: A0A1F4D1J7_9PROT (PKS_ER domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4D1J7_9PROT)

HSP 1 Score: 404 bits (1037), Expect = 2.740e-139
Identity = 201/263 (76.43%), Postives = 231/263 (87.83%), Query Frame = 1
Query:    1 MSPFKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALATPLFAGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            M+ FKAFRVHTIDGK VCRFE+L LE+LDPGPVVI+ AYSAITYKDAMAARGVGKNVRTDRPCVTG+DL+G VV+S D+RF +GD V VTNYKLG + DGGYA+YARVP DWIVPLP GL+LYEAMGLGTSGLTAAL VDRLE AGL P  G V ITGATGGVG+LA+N+FA RGY+V+AISGKRDQ  F++SIGA ++++RE+FL +RA LA  LFAGALDNVGG+Y DRLAAKMQP GK+AVAGMA+G EV TT+LPL+LR
Sbjct:    1 MATFKAFRVHTIDGKSVCRFEQLALEDLDPGPVVIQTAYSAITYKDAMAARGVGKNVRTDRPCVTGIDLAGVVVASADSRFTEGDRVIVTNYKLGADHDGGYADYARVPGDWIVPLPDGLTLYEAMGLGTSGLTAALTVDRLERAGLRPDMGTVAITGATGGVGTLAINIFAGRGYKVVAISGKRDQGEFLRSIGAHTVMSREEFLENRAPLAPSLFAGALDNVGGIYLDRLAAKMQPAGKLAVAGMAIGIEVKTTILPLVLR 263          
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: UPI001BACDE13 (acryloyl-CoA reductase n=2 Tax=Bradyrhizobium TaxID=374 RepID=UPI001BACDE13)

HSP 1 Score: 402 bits (1033), Expect = 1.800e-138
Identity = 199/263 (75.67%), Postives = 233/263 (88.59%), Query Frame = 1
Query:    1 MSPFKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALATPLFAGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            M+ FKA+RVHT+ GKPVC+FE+LT+++LD G VVIK AYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSG VVSS D RF +GD V VTNYKLGV QDGGYA+YARVP DW+VPLP GL LYEAMGLGTSGLTAALAVDRLE AGLTP+ G +GI+GATGGVGSLAV+MFA+RG++V AISGK +QE F+K IGA  +++R++ L D+A LA P+FAGALDNVGGV+FDRLAA++QP+GK+AVAGMAVGAE+ TTVLP +LR
Sbjct:    1 MTTFKAYRVHTVGGKPVCKFERLTMDDLDRGDVVIKTAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGVVVSSVDPRFREGDKVVVTNYKLGVNQDGGYADYARVPGDWVVPLPDGLDLYEAMGLGTSGLTAALAVDRLEKAGLTPEDGVMGISGATGGVGSLAVDMFAKRGFEVAAISGKAEQEQFLKKIGAKKIISRQELLADKAPLAPPMFAGALDNVGGVFFDRLAARLQPYGKLAVAGMAVGAELNTTVLPWVLR 263          
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: A0A6P2FJ39_9BURK (Quinone oxidoreductase YhfP n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2FJ39_9BURK)

HSP 1 Score: 389 bits (999), Expect = 1.590e-133
Identity = 199/264 (75.38%), Postives = 232/264 (87.88%), Query Frame = 1
Query:    1 MSPFKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALATPL-FAGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            M+ FKAFRVHTIDGKPVCRFE+LTL++LDPGPV+I+ A+SAITYKDAMAARGVG+NVRTDRPCVTGVD+SG VVSSED+RF +GD VAVTNYKLG EQDGGYAEY RVP DWIVPLP GLSLYEAM LGTSGLTAALAVDRLE AGLTP +G V +TGATGGVGSLAV+MFA+RG++V+AISGKR+QE F+KSIGA  ++ R++ L D++A+A+   FAGALDNVGG   DRL A+M+P GK+AVAGM VG E+ TTVLP +LR
Sbjct:    1 MNRFKAFRVHTIDGKPVCRFEQLTLDDLDPGPVLIRTAFSAITYKDAMAARGVGRNVRTDRPCVTGVDMSGVVVSSEDSRFREGDQVAVTNYKLGTEQDGGYAEYTRVPGDWIVPLPKGLSLYEAMALGTSGLTAALAVDRLEKAGLTPDAGPVAVTGATGGVGSLAVDMFARRGFEVVAISGKREQEDFLKSIGAARVMPRDELLADKSAMASGAPFAGALDNVGGGMLDRLMAQMRPHGKIAVAGM-VGVELHTTVLPFVLR 263          
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: A0A2E3KYH2_9PROT (Oxidoreductase n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E3KYH2_9PROT)

HSP 1 Score: 383 bits (983), Expect = 5.460e-131
Identity = 194/261 (74.33%), Postives = 224/261 (85.82%), Query Frame = 1
Query:   10 FKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALATP-LFAGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            FKA+RVHTIDGKP CRFE+L L++LDPGPV+IK AYSA+TYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSS DARF +GD VAVTNYKLGV QDGGYA+YARVPADWIVPLP GL+LYEAM LGTSGLTAALAVDRLE  G+TP  G   +TGATGGVGS+AV+M  + G++V AISGK DQ  F+  IGA +++  ++ L DR  L+TP L+A ALDNVGG YFDR++A+M P+GK+AVAGMAVGAEV+TTVLP ILR
Sbjct:    7 FKAYRVHTIDGKPDCRFEELALDDLDPGPVIIKTAYSAVTYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSTDARFREGDKVAVTNYKLGVNQDGGYADYARVPADWIVPLPDGLTLYEAMALGTSGLTAALAVDRLEKXGVTPDQGGAAVTGATGGVGSIAVDMLDRAGFEVTAISGKADQVDFLHEIGAKTVMNSKELLADRTPLSTPTLWAAALDNVGGEYFDRVSARMHPYGKIAVAGMAVGAEVSTTVLPWILR 267          
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: A0A225MVV0_9BURK (Oxidoreductase n=1 Tax=Candidimonas nitroreducens TaxID=683354 RepID=A0A225MVV0_9BURK)

HSP 1 Score: 348 bits (893), Expect = 2.170e-117
Identity = 179/264 (67.80%), Postives = 215/264 (81.44%), Query Frame = 1
Query:    1 MSPFKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALAT-PLFAGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            M+ FKAFRVHTID + VCRFE L L +LDPG V I+VA+SA+ YKDAMAARGVGKNVRTDRPCVTGVDLSG V+SS+D RF KGD V  TNY LG   DGGY+EYAR+PADWIVPLP GLSLYEAM LGTSGLTAALAVDRLE +GL+P SG + +TGA+GGVG LAV++ A RGY+V+AISGK +Q  F+KSIGA  ++ RE+FL  +A L T P FAGA+DNVGG+  DRL A+++P GK+A++GM V  E+ +TVLP +LR
Sbjct:    1 MNTFKAFRVHTIDSEAVCRFENLDLGDLDPGAVTIRVAFSAVNYKDAMAARGVGKNVRTDRPCVTGVDLSGIVISSQDPRFMKGDSVIATNYGLGNTHDGGYSEYARIPADWIVPLPTGLSLYEAMALGTSGLTAALAVDRLEQSGLSPDSGPIAVTGASGGVGCLAVDILAGRGYEVVAISGKPEQIDFLKSIGATRVMHREEFLSRKAPLVTNPEFAGAIDNVGGIMLDRLTAQLRPHGKVAISGM-VQIELQSTVLPFVLR 263          
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: A0A6G8CL04_9BURK (Acryloyl-CoA reductase n=1 Tax=Diaphorobacter sp. HDW4A TaxID=2714924 RepID=A0A6G8CL04_9BURK)

HSP 1 Score: 347 bits (891), Expect = 4.210e-117
Identity = 177/264 (67.05%), Postives = 214/264 (81.06%), Query Frame = 1
Query:    1 MSPFKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALATPLF-AGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            M  FKAFRVHTI  KPVCRFE+LT++E+D GPVVIKVAYSAITYKDAMAARGVG+NVRTDRPCVTGVDLSG VV S DARF  GD VAVTNY+LG   DG YA+YARVPA+W+VPLP  LSL++AM LGTSGLTAALA+DRL+ AGL P+ G V I+GATGGVGSLA+NM A  GY+V+AISGK +Q  ++K+IGA  ++ R+DF+RD A + +  + A ALDNVGG + DRL A ++P+GK+A+AGM V  +   TVLP +LR
Sbjct:    1 MEKFKAFRVHTIGDKPVCRFEQLTMDEIDDGPVVIKVAYSAITYKDAMAARGVGRNVRTDRPCVTGVDLSGTVVQSADARFKAGDRVAVTNYQLGTMHDGAYADYARVPAEWVVPLPDTLSLFDAMVLGTSGLTAALAIDRLQKAGLKPEDGPVAISGATGGVGSLAINMLANIGYEVVAISGKPEQSDYLKNIGASKIILRDDFMRDSAPMVSGAYLAAALDNVGGQFLDRLCANVKPYGKVAIAGM-VHVDTHMTVLPFVLR 263          
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: V8QXJ4_9BURK (Quinone oxidoreductase n=1 Tax=Advenella kashmirensis W13003 TaxID=1424334 RepID=V8QXJ4_9BURK)

HSP 1 Score: 345 bits (885), Expect = 3.430e-116
Identity = 175/264 (66.29%), Postives = 214/264 (81.06%), Query Frame = 1
Query:    1 MSPFKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALATPLF-AGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            M  FKAFRVHTIDGKPVC+FE+L+++++D G VVIKVAYSAITYKDAMAARGVGKNVR DRPCVTGVDLSG V+ S+D RF  GD VAVTNY+LG   DG YA+YARVPA+W+VPLP  LSL++AM LGTSGLTAALAVDR E AGL P  G +GI+GATGGVGSLA+NM +  GY+VIAISGKR+QE +++ IGA  ++ REDF++D A + +  + AGA+DNVGG + DRL A ++P GK+A+AGM V  +   TVLP +LR
Sbjct:    1 MEKFKAFRVHTIDGKPVCKFEQLSMDDIDDGAVVIKVAYSAITYKDAMAARGVGKNVRPDRPCVTGVDLSGTVLHSKDPRFTPGDRVAVTNYQLGTMHDGAYADYARVPAEWVVPLPDSLSLWDAMVLGTSGLTAALAVDRFEKAGLKPGDGPIGISGATGGVGSLAINMLSNLGYEVIAISGKREQEGYLREIGASKIILREDFMKDPAPMVSGAYMAGAMDNVGGQFLDRLCANVKPHGKVAIAGM-VFVDTKMTVLPFVLR 263          
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: UPI000966E14E (YhdH/YhfP family quinone oxidoreductase n=1 Tax=Alicycliphilus denitrificans TaxID=179636 RepID=UPI000966E14E)

HSP 1 Score: 340 bits (872), Expect = 3.120e-114
Identity = 170/264 (64.39%), Postives = 216/264 (81.82%), Query Frame = 1
Query:    1 MSPFKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALAT-PLFAGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            M  FKAFRVHT+D +PVC+FE+L+L+++D GPV+I+VAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSG V+ S D RF +GD VAVTNY+LG   DG YA+YARVPA+W+VPLP  LSL+EAM LGTSGLTAALA+DRL+ AG+ P+ G + I+GA+GGVGSLA+NM A+ G++V+AISGK +Q  +++ IGA  +L+R+DF+RD+A + +   FA ALDNVGG + DRL A ++P GK+A+AGM V  E   TVLP +LR
Sbjct:    1 MENFKAFRVHTVDERPVCKFEQLSLDDIDDGPVLIRVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGTVIRSADPRFKEGDRVAVTNYQLGTYHDGAYADYARVPAEWVVPLPDTLSLFEAMVLGTSGLTAALAIDRLQQAGVRPEHGPIAISGASGGVGSLAINMLAKLGHEVVAISGKPEQSGYLREIGASKILSRDDFMRDQAPMVSGAYFAAALDNVGGQFLDRLCANVKPHGKVAIAGM-VHVETKMTVLPFVLR 263          
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Match: A0A0A1VMW2_9BURK (NADPH:quinone reductase n=2 Tax=Acidovorax sp. MR-S7 TaxID=1268622 RepID=A0A0A1VMW2_9BURK)

HSP 1 Score: 318 bits (814), Expect = 1.200e-105
Identity = 162/248 (65.32%), Postives = 202/248 (81.45%), Query Frame = 1
Query:   49 VCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAARGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDGGYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQSGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSMLAREDFLRDRAALAT-PLFAGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVGAEVTTTVLPLILR 789
            +C++E+LTLE++D GPVVI+ A++AITYKDAMAARGVGKNVRTDRP VTG DLSG VV SED RF +G  VAVTNY+LG + DG YA+++RVP DWIVPLP GLSLYEAM LGTSGLTAALAVDRLE AGL P  G V ++GATGGVGS+AV+M ++RGY+V+AISGK +Q  F+K++GA  ++AR+ F+ D++ L + P +A ALDNVGG   DRLAA M P GK+A+AGM V   +TT+VLP +LR
Sbjct:    1 MCKYEQLTLEDIDQGPVVIRNAFAAITYKDAMAARGVGKNVRTDRPAVTGTDLSGVVVRSEDPRFKEGQKVAVTNYQLGNQHDGAYADFSRVPGDWIVPLPDGLSLYEAMALGTSGLTAALAVDRLERAGLKPDDGPVAVSGATGGVGSIAVDMLSKRGYEVVAISGKAEQVEFLKTLGASRVVARDAFMADKSPLVSGPAYAAALDNVGGAILDRLAANMMPHGKVAIAGM-VDTNLTTSVLPFVLR 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10102.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A525JQ99_BRASZ3.230e-14078.33Acryloyl-CoA reductase n=1 Tax=Bradyrhizobium sp. ... [more]
A0A1F4D1J7_9PROT2.740e-13976.43PKS_ER domain-containing protein n=1 Tax=Betaprote... [more]
UPI001BACDE131.800e-13875.67acryloyl-CoA reductase n=2 Tax=Bradyrhizobium TaxI... [more]
A0A6P2FJ39_9BURK1.590e-13375.38Quinone oxidoreductase YhfP n=3 Tax=unclassified V... [more]
A0A2E3KYH2_9PROT5.460e-13174.33Oxidoreductase n=1 Tax=Magnetovibrio sp. TaxID=202... [more]
A0A225MVV0_9BURK2.170e-11767.80Oxidoreductase n=1 Tax=Candidimonas nitroreducens ... [more]
A0A6G8CL04_9BURK4.210e-11767.05Acryloyl-CoA reductase n=1 Tax=Diaphorobacter sp. ... [more]
V8QXJ4_9BURK3.430e-11666.29Quinone oxidoreductase n=1 Tax=Advenella kashmiren... [more]
UPI000966E14E3.120e-11464.39YhdH/YhfP family quinone oxidoreductase n=1 Tax=Al... [more]
A0A0A1VMW2_9BURK1.200e-10565.32NADPH:quinone reductase n=2 Tax=Acidovorax sp. MR-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10102contigP-wetherbeei_contig10102:3..791 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog443598.AUFA01000008_gene3976
PFAMsADH_N,ADH_zinc_N
Model size789
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00050,RC00087,RC00088,RC00095,RC00099,RC00116,RC00649,RC01734,RC02273
KEGG koko:K00001,ko:K19745
KEGG ReactionR00623,R00754,R00919,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310
KEGG Pathwayko00010,ko00071,ko00350,ko00625,ko00626,ko00640,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00640,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.78e-135
EggNOG OGsCOG0604@1|root,COG0604@2|Bacteria,1MV3W@1224|Proteobacteria,2TRW7@28211|Alphaproteobacteria,3JQQ4@41294|Bradyrhizobiaceae
EC1.1.1.1
DescriptionZinc-binding dehydrogenase
Cds size789
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185854.7708392-CDS-P-wetherbeei_contig10102:2..7911683185854.7708392-CDS-P-wetherbeei_contig10102:2..791Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10102 3..791 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10102.1.1prot_P-wetherbeei_contig10102.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10102 3..791 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10102.1.1

>prot_P-wetherbeei_contig10102.1.1 ID=prot_P-wetherbeei_contig10102.1.1|Name=mRNA_P-wetherbeei_contig10102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
MSPFKAFRVHTIDGKPVCRFEKLTLEELDPGPVVIKVAYSAITYKDAMAA
RGVGKNVRTDRPCVTGVDLSGEVVSSEDARFAKGDLVAVTNYKLGVEQDG
GYAEYARVPADWIVPLPAGLSLYEAMGLGTSGLTAALAVDRLEAAGLTPQ
SGAVGITGATGGVGSLAVNMFAQRGYQVIAISGKRDQEPFMKSIGADSML
AREDFLRDRAALATPLFAGALDNVGGVYFDRLAAKMQPFGKMAVAGMAVG
AEVTTTVLPLILR
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mRNA from alignment at P-wetherbeei_contig10102:3..791-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10102.1.1 ID=mRNA_P-wetherbeei_contig10102.1.1|Name=mRNA_P-wetherbeei_contig10102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig10102:3..791- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCCCGTTCAAAGCGTTCCGCGTCCACACCATCGACGGCAAACCCGT GTGCCGGTTCGAAAAGCTCACGCTGGAAGAACTCGACCCCGGCCCCGTCG TCATCAAGGTTGCCTATTCGGCGATCACTTACAAGGACGCGATGGCGGCG CGCGGGGTTGGCAAAAACGTGCGTACCGACCGGCCGTGCGTTACCGGCGT CGACCTCTCCGGCGAAGTGGTGTCATCGGAGGACGCGCGTTTTGCCAAAG GCGACTTGGTCGCGGTGACGAATTACAAGCTCGGCGTGGAACAGGACGGC GGCTACGCGGAATACGCGCGCGTGCCGGCGGACTGGATCGTTCCCCTGCC GGCCGGCCTGTCGCTCTACGAAGCGATGGGGCTTGGCACTTCCGGGCTGA CGGCGGCCCTCGCGGTGGACCGGCTCGAGGCCGCCGGGTTAACACCTCAG AGCGGCGCAGTCGGCATCACGGGCGCGACCGGCGGCGTCGGCAGCCTCGC CGTCAACATGTTCGCGCAACGCGGCTACCAGGTGATTGCCATTTCCGGCA AGCGCGACCAGGAACCTTTCATGAAATCGATCGGCGCCGACAGCATGCTA GCGCGCGAGGATTTTCTGCGCGATCGCGCGGCGCTGGCAACGCCGCTCTT CGCCGGCGCGCTCGACAACGTGGGCGGCGTCTACTTCGACCGGCTCGCCG CCAAAATGCAGCCTTTCGGAAAAATGGCCGTGGCGGGAATGGCGGTGGGC GCCGAGGTTACGACCACCGTGCTGCCGCTGATCCTGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10102:3..791-

>mRNA_P-wetherbeei_contig10102.1.1 ID=mRNA_P-wetherbeei_contig10102.1.1|Name=mRNA_P-wetherbeei_contig10102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig10102:3..791- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCCCGTTCAAAGCGTTCCGCGTCCACACCATCGACGGCAAACCCGT
GTGCCGGTTCGAAAAGCTCACGCTGGAAGAACTCGACCCCGGCCCCGTCG
TCATCAAGGTTGCCTATTCGGCGATCACTTACAAGGACGCGATGGCGGCG
CGCGGGGTTGGCAAAAACGTGCGTACCGACCGGCCGTGCGTTACCGGCGT
CGACCTCTCCGGCGAAGTGGTGTCATCGGAGGACGCGCGTTTTGCCAAAG
GCGACTTGGTCGCGGTGACGAATTACAAGCTCGGCGTGGAACAGGACGGC
GGCTACGCGGAATACGCGCGCGTGCCGGCGGACTGGATCGTTCCCCTGCC
GGCCGGCCTGTCGCTCTACGAAGCGATGGGGCTTGGCACTTCCGGGCTGA
CGGCGGCCCTCGCGGTGGACCGGCTCGAGGCCGCCGGGTTAACACCTCAG
AGCGGCGCAGTCGGCATCACGGGCGCGACCGGCGGCGTCGGCAGCCTCGC
CGTCAACATGTTCGCGCAACGCGGCTACCAGGTGATTGCCATTTCCGGCA
AGCGCGACCAGGAACCTTTCATGAAATCGATCGGCGCCGACAGCATGCTA
GCGCGCGAGGATTTTCTGCGCGATCGCGCGGCGCTGGCAACGCCGCTCTT
CGCCGGCGCGCTCGACAACGTGGGCGGCGTCTACTTCGACCGGCTCGCCG
CCAAAATGCAGCCTTTCGGAAAAATGGCCGTGGCGGGAATGGCGGTGGGC
GCCGAGGTTACGACCACCGTGCTGCCGCTGATCCTGCGC
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