mRNA_P-wetherbeei_contig1007.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: D8LJI4_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI4_ECTSI) HSP 1 Score: 177 bits (448), Expect = 1.670e-42 Identity = 89/216 (41.20%), Postives = 138/216 (63.89%), Query Frame = 1 Query: 154 IMGNKEEWEKRNDALVKLHALILEQQ---------GDAAAFNAELWRTLKEPLLYTLGDLRSALVKEACRVVELLSETTGDGMRPLLRELMPLLLATVGSANGVIKDHIDHCMQHIIKHTKFPRQLKDLVHEAQTTKSAPLREALSLYLTLILEHWPPASLDKETALLEAAIGALLEDASVRARGHARTAFFLFQERWPQRAERIRETILPRTAKM 774 + GN ++WE+R AL + + G+ A F AE+WR L+EPL +TL DLRSA+VKEAC ++E LS+ G+ M L+R+++ +LL + + N VI +D CM+HII+H++FPRQLK++ + + ++S LRE++ Y+ L+L WPPAS+DKE LE+ I LL DA+ AR AR +F + E WP+RA+++ + L ++M Sbjct: 21 VSGNPDDWERRRKALYSMQQAADDAGKALSAAGGGGEKAVFTAEVWRYLREPLKHTLNDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEVEYTVRNSRSKDLRESVGAYVLLMLRAWPPASMDKEAGYLESIIALLLRDAASAARTDARASFGMLMEHWPKRADKVLQCPLRSASEM 236
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: A0A6H5KBA3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBA3_9PHAE) HSP 1 Score: 152 bits (383), Expect = 2.090e-34 Identity = 174/470 (37.02%), Postives = 231/470 (49.15%), Query Frame = 1 Query: 154 IMGNKEEWEKRNDALVKLHALILEQQ---------GDAAAFNAELWRTLKEPLLYTLGDLRSALVKEACRVVELLSETTGDGMRPLLRELMPLLLATVGSANGVIKDHIDHCMQHIIKHTKFPRQLKDLVHEAQTTKSAPLREALSLYLTLILEHWPPASLDKETALLEAAIGALLEDASVRARGHARTAFFLFQERWPQRAERIRETILPRTAKMLADDPGGXXXXXXXXXXXXXXXXXXXXXXXTASKRPMTGIPRPVTGRSESRAMARRPSAEVAXXXXXXXXXXXXXXXXRVNTVPRSRAGTDDTDPSAATAAEPPVEVAEAPLLLSRGSARSISAESATGASXXXXXXXXXXXXXXXRGAVVFGAAPDGAEGGRAADDAGDEGDGNGGAMRDRVRIRVGQRVTALAHGKYHDAIVRHVGPTDFMPGHWVGMELSK---PDGKNDGTLEGKRYFTCRPNYGLFVRP 1527 + GN ++WE+R AL + + + G+ A F AE+WR L+EPL +TL DLRSA+VKEAC ++E LS+ G+ M L+R+++ +LL + + N VI +D CM+HII+H++FPRQLK++ + + ++S LRE++ Y+ L+L WPPAS+DKE LE+ I A A GH A Q R XXXXXXXXXXXXXXXXXXXXXXX A PS P++R T+PSA V EA L S++ A+G XXXXXXXXXXXXXXX A P G EGG A G+G + + G +V L K A+VR+VG T F G WVG+ELS P G NDG++ G YF C P G+F +P Sbjct: 21 VSGNPDDWERRRKALYSMQQAVDDAGKALSAASGGGEKAVFTAEVWRYLREPLKHTLNDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEVEYTVRNSRSKDLRESVGAYVLLMLRAWPPASMDKEAGHLESII------AVAAASGHNDPAPSPPQHRATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMATGASPSGR-----------------------PKNRR---PTNPSAT--------VTEAALA-------SVAKSPASGXXXXXXXXXXXXXXXXXXXXXXXRAPPAG-EGGSVA--------GSGEGVTAVTSLVEGSKV-CLQGQKKRAAVVRYVGETQFATGVWVGVELSPGADPPGNNDGSVRGVSYFKCPPLCGVFAKP 433
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: A0A401P727_SCYTO (CAP-Gly domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401P727_SCYTO) HSP 1 Score: 85.9 bits (211), Expect = 3.550e-16 Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 1321 VRIRVGQRVTALAHGKYHDAIVRHVGPTDFMPGHWVGMELSKPDGKNDGTLEGKRYFTCRPNYGLFVRPGAIT 1539 V+++ G +V + + A ++++GPTDF PG W+G+EL P GKNDG++ KRYFTC+PNYG+ VRP +T Sbjct: 45 VKLQEGSQVLLTSSSEM--ATIKYIGPTDFAPGIWLGLELRSPKGKNDGSVGEKRYFTCKPNYGVLVRPSRVT 115
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: A0A8E6G882_COCPS (CAP-Gly domain-containing protein n=1 Tax=Coccidioides posadasii (strain RMSCC 757 / Silveira) TaxID=443226 RepID=A0A8E6G882_COCPS) HSP 1 Score: 86.3 bits (212), Expect = 4.480e-16 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 1378 AIVRHVGPTDFMPGHWVGMELSKPDGKNDGTLEGKRYFTCRPNYGLFVRPGAITEVFGSGDDEDA 1572 AI+R +G T F PG W+G+EL +P GKNDG ++G+RYF C NYG+F+RP A+T V EDA Sbjct: 18 AIIRFIGATHFAPGEWIGIELEEPTGKNDGAVQGERYFDCEQNYGMFIRPTAVTAVLEQPRKEDA 82
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: A0A443PZ93_9MAGN (CLIP-associated-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PZ93_9MAGN) HSP 1 Score: 92.4 bits (228), Expect = 2.030e-15 Identity = 67/234 (28.63%), Postives = 115/234 (49.15%), Query Frame = 1 Query: 97 VEKMSSSHLKKEVEAAVAAIMGNKEEWEKRNDALVKLHALILEQQGDAAAFNAELWRTLKEPLLYTLGDLRSALVKEACRVVELLSETTGDGMRPLLRELMPLLLATVGSANGVIKDHIDHCMQHIIKHTKFPRQLKDLVHEAQTTKSAPLREALSLYLTLILEHWPPA-SLDKETALLEAAIGALLEDASVRARGHARTAFFLFQERWPQRAERIRETILPRTAKMLADDPGG 795 V+ S L +E++ + ++ K+ W R A+ ++ L+L D +F L + L PL L D RS++VK+ACR++ LLS+ +P+LL V VI + D+C++ ++++ K R L + A+ +S+ LR Y LILE+W A + + L E I DA R ART + +F + WP+R+ R+ P +++ ++ GG Sbjct: 109 VKVFSEKILIREIDNIASTLVPEKD-WSVRIAAMQRVEGLVLGGATDYPSFTT-LLKQLITPLSTQLSDRRSSIVKQACRLLCLLSKELLGDFEACAEMFIPVLLKLVVITVLVIAESADNCLKTMLRNCKVTRVLPRIADCAKNDRSSMLRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCAADAMSEVRSIARTCYRMFAKTWPERSRRLFICFDPAVQRLMNEEDGG 340
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: UPI000A1C5CC8 (CAP-Gly domain-containing linker protein 4 n=2 Tax=Oxudercinae TaxID=497678 RepID=UPI000A1C5CC8) HSP 1 Score: 91.7 bits (226), Expect = 2.270e-15 Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 1279 GDEGDGNGGAMRDRVRIRVGQRVTALAHGKYHDAIVRHVGPTDFMPGHWVGMELSKPDGKNDGTLEGKRYFTCRPNYGLFVRPGAIT 1539 G G G G+ +VR+RVG +V L + A +R++G DF PG W+G+EL P GKNDG+++G+RYFTCRP YG+ VRP +T Sbjct: 596 GSGGSGPAGSAPGQVRLRVGMQV--LLNSANEMAFIRYLGTADFAPGLWLGLELRTPKGKNDGSVDGRRYFTCRPGYGVLVRPSRVT 680
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: A0A3P8I7H7_TRIRE (CAP-Gly domain-containing protein n=2 Tax=Trichobilharzia regenti TaxID=157069 RepID=A0A3P8I7H7_TRIRE) HSP 1 Score: 82.8 bits (203), Expect = 2.890e-15 Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 1321 VRIRVGQRVTALAHGKYHDAIVRHVGPTDFMPGHWVGMELSKPDGKNDGTLEGKRYFTCRPNYGLFVRPGAITEVF 1548 ++RVG RV GK V VG T F PG WVG+ L +P GKN+GT++GKRYFTC N+G+FVRP +VF Sbjct: 40 AKLRVGCRVEVT--GKDVFGTVAFVGATQFSPGKWVGVILDEPKGKNNGTVQGKRYFTCEENFGIFVRPSQYEKVF 113
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: A0A3B4BN50_9GOBI (Si:dkeyp-47f9.4 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BN50_9GOBI) HSP 1 Score: 87.0 bits (214), Expect = 1.380e-14 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 1279 GDEGDGNGGAMRDRVRIRVGQRVTALAHGKYHDAIVRHVGPTDFMPGHWVGMELSKPDGKNDGTLEGKRYFTCRPNYGLFVRPGAIT 1539 G G G G+ +VR+RVG +V L + A +R++G DF G W+G+EL P GKNDG+++G+RYF+CRP YG+ VRP +T Sbjct: 268 GSGGSGPAGSAPGQVRLRVGMQV--LLNSANEMAFIRYLGTADFASGLWLGLELRTPKGKNDGSVDGRRYFSCRPGYGVLVRPSRVT 352
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: UPI001403E266 (CAP-Gly domain-containing linker protein 4 isoform X1 n=7 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001403E266) HSP 1 Score: 89.0 bits (219), Expect = 1.640e-14 Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 1321 VRIRVGQRVTALAHGKYHDAIVRHVGPTDFMPGHWVGMELSKPDGKNDGTLEGKRYFTCRPNYGLFVRPGAIT 1539 V++ G +V L AI+R++GPTDF PG W+G+EL P GKNDG++ KRYFTC+PNYG+ VRP +T Sbjct: 636 VKLHEGSQV--LLSSSSEMAIIRYIGPTDFAPGVWLGLELRSPKGKNDGSVAEKRYFTCKPNYGVLVRPSRVT 706
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Match: UPI0010A057B1 (CAP-Gly domain-containing linker protein 4-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI0010A057B1) HSP 1 Score: 86.3 bits (212), Expect = 1.770e-14 Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 1321 VRIRVGQRVTALAHGKYHDAIVRHVGPTDFMPGHWVGMELSKPDGKNDGTLEGKRYFTCRPNYGLFVRPGAI 1536 V++ G ++ L+ + A +R++GPTDF PG W+G+EL P GKNDG++ +RYFTCRPNYG+ VRP I Sbjct: 253 VKLHQGMQILLLSSNEM--ATLRYIGPTDFAPGLWLGLELRSPKGKNDGSVGDRRYFTCRPNYGVLVRPSRI 322 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1007.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1007.4.1 >prot_P-wetherbeei_contig1007.4.1 ID=prot_P-wetherbeei_contig1007.4.1|Name=mRNA_P-wetherbeei_contig1007.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=612bp MSSSHLKKEVEAAVAAIMGNKEEWEKRNDALVKLHALILEQQGDAAAFNAback to top mRNA from alignment at P-wetherbeei_contig1007:4267..7436+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1007.4.1 ID=mRNA_P-wetherbeei_contig1007.4.1|Name=mRNA_P-wetherbeei_contig1007.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3170bp|location=Sequence derived from alignment at P-wetherbeei_contig1007:4267..7436+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1007:4267..7436+ >mRNA_P-wetherbeei_contig1007.4.1 ID=mRNA_P-wetherbeei_contig1007.4.1|Name=mRNA_P-wetherbeei_contig1007.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1836bp|location=Sequence derived from alignment at P-wetherbeei_contig1007:4267..7436+ (Phaeothamnion wetherbeei SAG_119_79)back to top |