mRNA_P-wetherbeei_contig10059.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10059.1.1
Unique NamemRNA_P-wetherbeei_contig10059.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: A0A835YT73_9STRA (PAS/PAC sensor hybrid histidine kinase putative blue light receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT73_9STRA)

HSP 1 Score: 702 bits (1811), Expect = 1.440e-236
Identity = 365/476 (76.68%), Postives = 402/476 (84.45%), Query Frame = 1
Query:    1 VKLTNYRKNGEKFQNLLSMKPVFDADGIYRYVIGVQFEIVQDQGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKVTGEANQMIAAKEQILSAGEQREEQEAAASG-TRPKGKYKKKKAGAGGAGGMGXXXXXXXXGTPPLNYDGTVFAFTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWAEAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPIVSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGEQLPIKTVAYGKDPADPGYWMDLFRTMSESLRIAMVVSDMFVPGIPLVHVNEGFKYHTGYGKESIGKNCKFLQGPATEGYMNTEIMEALRHAEPLFCKLHNHKADGSKFQCLLVLQPVFTPEGEYKYQIGMQIDYNPNNPETPMMVMEMERVVRNLPQTTTGEAPKAQGARVGELEAALTRL 1425
            VKLTNYRKNG+KFQNLLSMKPVFD DGIYRYVIGVQFEI+ DQGLKKRLVQLDKLLRLLPSRL LKSKASAQARGALAAKVTGEANQMIAAKEQIL+AGE REEQE A++G  RPKGKYKKKK  +   G MG        G P  NYDGT+FAFTKIMW QDPVSALRYMLMDQ GY ALD FLR QGSVL Q HLRFWAEAQQILMTQGPQQM  AR LH+RM  NALFYCTTNEIV+GQLNRTSWPP+V EMARWQE +L+FLASD+F RFME+NQ+R+Y+YAL  RE +GEQLPIKTVA+GKD  DP  WM+LF+TMSESLR   VVSDM +PGIPL +VNEGF+  TGYGKE IGKNCKF+ GPATE Y+  EIME+LRHAEPLF KLHNHKA+G+KFQCLLVL PVFTPEGEYKYQIG QIDY+P +P+TPM+V+EMER  RN+PQ TTG AP A  A+  E+EA L  L
Sbjct: 1028 VKLTNYRKNGDKFQNLLSMKPVFDGDGIYRYVIGVQFEIIADQGLKKRLVQLDKLLRLLPSRLPLKSKASAQARGALAAKVTGEANQMIAAKEQILTAGEMREEQEEASTGGVRPKGKYKKKKKNSA-VGMMGMS------GGP--NYDGTIFAFTKIMWLQDPVSALRYMLMDQGGYLALDAFLRQQGSVLTQMHLRFWAEAQQILMTQGPQQMAVARALHKRMVQNALFYCTTNEIVIGQLNRTSWPPLVQEMARWQEQTLFFLASDTFTRFMESNQAREYLYALRQREVSGEQLPIKTVAHGKDINDPNIWMELFKTMSESLRFGCVVSDMTIPGIPLAYVNEGFRGVTGYGKEVIGKNCKFITGPATEAYLTEEIMESLRHAEPLFTKLHNHKANGAKFQCLLVLHPVFTPEGEYKYQIGGQIDYDPASPDTPMLVLEMERAFRNMPQVTTGVAPPALAAKTQEMEAMLGPL 1494          
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: D7FQX8_ECTSI (Helmchrome putative blue light receptor for phototaxis n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQX8_ECTSI)

HSP 1 Score: 667 bits (1720), Expect = 3.630e-223
Identity = 344/494 (69.64%), Postives = 386/494 (78.14%), Query Frame = 1
Query:    1 VKLTNYRKNGEKFQNLLSMKPVFDADGIYRYVIGVQFEIVQDQGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKVTGEANQMIAAKEQILSAGEQREEQEAAASGTRPKGKYKKKKAGAGGAGGMGXXXXXXXXGTPPLNYDGTVFAFTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWAEAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPIVSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGEQLPIKTVAYGKDPADPGYWMDLFRTMSESLRIAMVVSDMFVPGIPLVHVNEGFKYHTGYGKESIGKNCKFLQGPATEGYMNTEIMEALRHAEPLFCKLHNHKADGSKFQCLLVLQPVFTPEGEYKYQIGMQIDYNPNNPETPMMVMEMERVVRNLPQTTTGEAPKAQGARVGELEAALTRL------AGPAGTSRRPSVG 1464
            VKLTNYRKNGEKFQNLLSMKPVFD D IYRYVIGVQFEI++D+GLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAK TGEAN MI+AKEQILSAGEQREE+EA A G RPK K+      AG A                 NYDGT+FAFTKIMW QD  + LR MLMDQ G+ A DGFL+  GS L+QTHLRFW EAQQILM+QGPQQ+ AAR+LH RM  N+LFYCTTNEIV+G LNRT WPP++ EMARWQE SLYFLA D F RFMEA QSR++VYAL  RE NGEQLP+KTV++G DP  PGYWMD+ + MSE+LRI +VVSDMFVPG PL ++NEGF   TGYGKE+IG+N KFLQGP TEGYM  EI+E+LRHA+PLFCKL NHK DGS +Q  L L PVF  +GEYKYQIG Q+DY+PNNPETPM +ME+ERVVRNLPQT TGE PKA   R  ELE  L  +      AGP G +  P  G
Sbjct: 1025 VKLTNYRKNGEKFQNLLSMKPVFDGDNIYRYVIGVQFEILEDKGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKTTGEANTMISAKEQILSAGEQREEKEATAGGARPKQKFXXXXXAAGAA--------------QADNYDGTIFAFTKIMWLQDAATTLRSMLMDQAGFMAFDGFLKQCGSQLSQTHLRFWVEAQQILMSQGPQQVKAARQLHMRMWKNSLFYCTTNEIVIGNLNRTGWPPLIQEMARWQELSLYFLAQDCFTRFMEAPQSREFVYALVQREVNGEQLPVKTVSFGLDPESPGYWMDMLKAMSETLRIGLVVSDMFVPGCPLAYLNEGFAAQTGYGKENIGRNSKFLQGPMTEGYMVEEIVESLRHADPLFCKLQNHKPDGSVYQLCLCLTPVFNVDGEYKYQIGCQVDYDPNNPETPMFIMELERVVRNLPQTITGETPKAMPTRTQELEDFLASITAGGTGAGPGGLTATPPSG 1504          
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: A0A126X2E1_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E1_9PHAE)

HSP 1 Score: 655 bits (1691), Expect = 2.330e-222
Identity = 340/494 (68.83%), Postives = 383/494 (77.53%), Query Frame = 1
Query:    1 VKLTNYRKNGEKFQNLLSMKPVFDADGIYRYVIGVQFEIVQDQGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKVTGEANQMIAAKEQILSAGEQREEQEAAASGTRPKGKYKKKKAGAGGAGGMGXXXXXXXXGTPPLNYDGTVFAFTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWAEAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPIVSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGEQLPIKTVAYGKDPADPGYWMDLFRTMSESLRIAMVVSDMFVPGIPLVHVNEGFKYHTGYGKESIGKNCKFLQGPATEGYMNTEIMEALRHAEPLFCKLHNHKADGSKFQCLLVLQPVFTPEGEYKYQIGMQIDYNPNNPETPMMVMEMERVVRNLPQTTTGEAPKAQGARVGELEAALTRL------AGPAGTSRRPSVG 1464
            VKLTNYRKNGEKFQNLLSMKPVFD D IYRYVIGVQFEI++D+GLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAK TGEAN MIAAKEQILSAGEQREE+EAA SG RPK K+K     AGG                  NYDGT+FAFTKIMW QD V+ LR MLMDQ G+ + D FL+  GS L+QTHLRFW EAQQILM QGPQQ+ AAR+LH RM  N+LFYCTTNEIV+G LNRT WPP++ EM RWQE SLYFLA D F R+ME+ QSR++V AL  RE NGEQLP+KTV+ G DP  P YWMD+ + MSE+LRI +VVSDMFVPG PL ++NEGF   TGYGKE+IG+N KFLQGP TEGYM  EI+E+LRHA+PLFCKL NHK DG+ +Q  L L PVF  +GEYKYQIG Q+DY+PNNPETPM +ME+ERVVRNLPQT TGE PKA   R  ELE  L  +      AGP G +  P  G
Sbjct:  707 VKLTNYRKNGEKFQNLLSMKPVFDGDNIYRYVIGVQFEILEDKGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKTTGEANTMIAAKEQILSAGEQREEKEAAGSGARPKQKFKXXXXAAGGV-------------AQADNYDGTIFAFTKIMWLQDAVNTLRSMLMDQAGFMSFDAFLKQCGSQLSQTHLRFWVEAQQILMCQGPQQVQAARQLHMRMWKNSLFYCTTNEIVIGNLNRTGWPPLIQEMGRWQEMSLYFLAFDCFTRYMESPQSREFVTALQLREANGEQLPVKTVSVGLDPDSPSYWMDMLKAMSETLRIGLVVSDMFVPGCPLAYLNEGFAAQTGYGKENIGRNSKFLQGPMTEGYMVEEIVESLRHADPLFCKLQNHKPDGTVYQQCLCLTPVFNVDGEYKYQIGCQVDYDPNNPETPMFIMELERVVRNLPQTLTGETPKAMPTRTQELEDFLASITAGGTGAGPGGLTATPPSG 1187          
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: A0A126WYE1_SCYLO (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126WYE1_SCYLO)

HSP 1 Score: 620 bits (1600), Expect = 4.580e-214
Identity = 332/494 (67.21%), Postives = 376/494 (76.11%), Query Frame = 1
Query:    1 VKLTNYRKNGEKFQNLLSMKPVFDADGIYRYVIGVQFEIVQDQGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKVTGEANQMIAAKEQILSAGEQREEQEAAASGTRPKGKYKKKKAGAGGAGGMGXXXXXXXXGTPPLNYDGTVFAFTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWAEAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPIVSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGEQLPIKTVAYGKDPADPGYWMDLFRTMSESLRIAMVVSDMFVPGIPLVHVNEGFKYHTGYGKESIGKNCKFLQGPATEGYMNTEIMEALRHAEPLFCKLHNHKADGSKFQCLLVLQPVFTPEGEYKYQIGMQIDYNPNNPETPMMVMEMERVVRNLPQTTTGEAPKAQGARVGELEAALTRL------AGPAGTSRRPSVG 1464
            VKLTNYRKNGEKFQNLLSMKPVFD D IYRYVIGVQFEI++D+GLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAK TGEAN MIAAKEQILSAGEQRE                             XXXXXXXX     NYDGT+FAFTKIMW QD V+ LR MLMDQ G+ + D FL+  GS L+QTHLRFW EAQQILM QGPQQ+ AAR+LH RM  N+LFYCTTNEIV+G +NRT+WPP++ EM RWQE SLYFLA D F R+ME+ QSR++V AL  RE NGEQLP+KTV+ G DP  P YWMD+ + MSE+LRI +VVSDMFVPG PL ++NEGF   TGYGKE+IG+N KFLQGP TEGYM  EI+E+LRHA+PLFCKL NHK DG+ +Q  L L PVF  +GEYKYQIG Q+DY+P+NPETPM +ME+ERVVRNLPQT TGE PKA   R  ELE  L  +      AGP G +  P  G
Sbjct:  290 VKLTNYRKNGEKFQNLLSMKPVFDGDNIYRYVIGVQFEILEDKGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKTTGEANTMIAAKEQILSAGEQREXXXXXXXXXXXXXXXX-------------XXXXXXXXAAQADNYDGTIFAFTKIMWLQDAVNTLRSMLMDQAGFMSFDAFLKQCGSQLSQTHLRFWVEAQQILMCQGPQQVQAARQLHMRMWKNSLFYCTTNEIVIGNINRTAWPPLIQEMGRWQELSLYFLALDCFTRYMESPQSREFVTALQLREANGEQLPVKTVSVGLDPDSPSYWMDMLKVMSETLRIGLVVSDMFVPGCPLAYLNEGFTAQTGYGKENIGRNSKFLQGPMTEGYMVEEIVESLRHADPLFCKLQNHKPDGTVYQQCLCLTPVFNVDGEYKYQIGCQVDYDPSNPETPMFIMELERVVRNLPQTLTGETPKAMPTRTQELEDFLASITAGGTGAGPGGLTATPPSG 770          
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: A0A7S1UBY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBY0_9STRA)

HSP 1 Score: 437 bits (1125), Expect = 1.130e-142
Identity = 236/481 (49.06%), Postives = 318/481 (66.11%), Query Frame = 1
Query:    1 VKLTNYRKNGEKFQNLLSMKPVFDADGIYRYVIGVQFEIVQDQGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKVTGEANQMIAAKEQILSAGEQREEQEAAASGTRPKGKYKKKKAGAGGAGGMGXXXXXXXXGTPPLNYDGTVFAFTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWAEAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPIVSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGEQLPIKTVAYGKDPADPGYWMDLFRTMSESLRIAMVVSDMFVPGIPLVHVNEGFKYHTGYGK-ESIGKNCKFLQGPATEGYMNTEIMEALRHAEPLFCKLHNHKADGSKFQCLLVLQPVFTPEGEYKYQIGMQIDYNPNNPETPMMVMEMERVVRNLPQTTTGEAPKAQGARVGELEAALTRLAGPAG 1440
            V LTNYRKNGEKF+NLLSM+PVFDAD IYRYVIGVQFE+VQD+ LKKRLVQLDKLL+LLP ++ LKSKASA+ARG LAAK TGEANQ +   + +L  GEQ E +E    G+RP+ K +K+                        +Y   ++AFTKIMW QDP++ALR +L      +    F   + S+LA+ H+ F+ E +QI      +QM  A ELHRRM +NALFYCTTNEIVVGQ+ +  W  I+    +WQ+ +L+ LASD F RFME+  S+     +   E  G+    +T A G +P   G+++++F+ MSE+L +A V++DM +PG+PL +VNEGF   TGY K +++G+NCKFLQG  T+ Y+  EI+EALR +EPL   L+N+K +G  FQC L LQP++T + EYKYQ+GMQ+D +P+N     ++MEMER +R LP TTTG+AP     R  +L   L ++ G  G
Sbjct:  287 VLLTNYRKNGEKFRNLLSMRPVFDADNIYRYVIGVQFEVVQDKNLKKRLVQLDKLLKLLPRKIGLKSKASARARGKLAAKTTGEANQAVGQGDAVLKQGEQEEMREGG--GSRPREKIQKQ-----------------VVDQTSFDYSKAIYAFTKIMWLQDPITALRGILGTPDSASIFLQFAE-KSSILAKFHVTFYMEMEQIKGAPQSEQMRMAFELHRRMGYNALFYCTTNEIVVGQIRQADWNTILQNALKWQQQTLFMLASDLFPRFMESEMSKQAFDKIRQMEIGGQNGMARTAACGLNPRQDGFYLEMFKAMSETLNVAAVITDMQIPGLPLQYVNEGFMACTGYSKADAMGRNCKFLQGEKTQNYLIDEIVEALRQSEPLVTSLYNYKKNGQMFQCTLALQPIWTEDLEYKYQVGMQVDVDPSNQNQMRLLMEMERAMRILPLTTTGKAPPEMEERKVQLGQVLQQMGGGTG 747          
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: A0A7S1UEB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEB3_9STRA)

HSP 1 Score: 403 bits (1035), Expect = 1.370e-125
Identity = 225/463 (48.60%), Postives = 300/463 (64.79%), Query Frame = 1
Query:    1 VKLTNYRKNGEKFQNLLSMKPVFDADGIYRYVIGVQFEIVQDQGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKVTGEANQMIAAKEQILSAGEQREEQEAAASGTRPKGKYKKKKAGAGGAGGMGXXXXXXXXGTPPLNYDGTVFAFTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWAEAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPIVSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGEQLPIKTVAYGKDPADPGYWMDLFRTMSESLRIAMVVSDMFVPGIPLVHVNEGFKYHTGYGKE-SIGKNCKFLQGPATEGYMNTEIMEALRHAEPLFCKLHNHKADGSKFQCLLVLQPVFTPEGEYKYQIGMQIDYNPNNPETPMMVMEMERVVRNLPQTTTGEAPKAQG 1386
            V LTNYRKNGEKF+NLLSM+PVFDAD IYRYVIGVQFE+VQD+ LKKRLVQLDKLL+LLP ++ LKSKASA+ARG LAA  +GEAN  I  KEQ+++  +Q  +QE  +   + + K  ++ A A               GT  +NYD  + AFT+IMW    + AL+ ++ D    A +D F+    S L Q H +F  EA  I    G       R+LH+RM  N LFYCT NEIV+GQL+RT W  ++  + +  + SLY L++D F RF+ +  ++  +  +A +E +G+Q  + T A G     P YWMD+F+ MSE++ + MV+SDM VPGIPL HVNEGF+  TGY K+ +IGKNC FLQG  TE Y+  EIMEALRHA+PL  KL N+K  G  FQCL  L P+   +GEYK+Q+G+Q++    +P+    ++E ERV+R LP TT G  P+  G
Sbjct:  626 VLLTNYRKNGEKFRNLLSMRPVFDADNIYRYVIGVQFEVVQDKNLKKRLVQLDKLLKLLPRKIGLKSKASARARGKLAANPSGEANTAILNKEQVMAQEQQAMQQEMQSGAAQARPKPVEEVAPA-----------TMPNGTE-VNYDNALVAFTRIMWTNQAMPALQGLMTDNDVVAMMDQFVSTC-SPLVQCHYQFVKEAMMI-KNAGGNMAQVMRQLHKRMDKNPLFYCTNNEIVIGQLDRTDWNSLLPGIDKGLQQSLYMLSTDMFPRFLNSAWAKPAIMKVAGKEASGQQGAVGTAARGCQKQSPSYWMDMFKNMSETVSVGMVISDMTVPGIPLAHVNEGFQAVTGYSKQDAIGKNCSFLQGQGTEMYLIEEIMEALRHADPLCIKLTNYKKGGQLFQCLFALHPILGHDGEYKFQVGIQVEMC-ESPQITAQLVEFERVLRMLPSTTNGMDPEEIG 1073          
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: A0A6H5KP07_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP07_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 3.350e-115
Identity = 210/440 (47.73%), Postives = 272/440 (61.82%), Query Frame = 1
Query:   55 MKPVFDADGIYRYVIGVQFEIVQDQGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKVTGEANQMIAAKEQILSAGEQREEQEAAASGTRPKGKYKKKKAGAGGAGGMGXXXXXXXXGTPPLNYDGTVFAFTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWAEAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPIVSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGEQLPIKTVAYGKDPADPGYWMDLFRTMSESLRIAMVVSDMFVPGIPLVHVNEGFKYHTGYGKESIGKNCKFLQGPATEGYMNTEIMEALRHAEPLFCKLHNHKADGSKFQCLLVLQPVFTPEGEYKYQIGMQI---DYNPNNPETPMMVMEMERVVRNLPQTTTG 1365
            MKPVFDAD IYRYVIGVQFEI+QD+GLKKRLVQLDKLLRLLPSRLNLKSKA A+ RG +A+K+ GEAN  +  KE I+ A  +  E +   SG R                               +N+D T+F+FT+IMW  +P   L  ++ D    A L  F++   SV+ + H  F+ +++ +  T    +   ++ +HR M HN LFYCT NEIV+G + +T+  PI +E+    + SLYFLA D F RF+ +      +  L  RE  GE+ PI TVA  K+ +   +W+++F+TMSE++ I MVV+DM VPG PL +VNEGFK  TGYGKE+IG+NCKFLQG  TEGYM  EIM AL+  EPL CKLHNHKADG KFQ LL L PVF  EGEY YQ   +I   DY  +    P  V++M  +    P T +G
Sbjct:    1 MKPVFDADNIYRYVIGVQFEILQDEGLKKRLVQLDKLLRLLPSRLNLKSKAKARMRGKMASKMNGEANSALQDKESIVKA--EAAEGDVTMSGPRA------------------MVEDEVDMDCARMNFDNTIFSFTRIMWLSNPTKYLSALVADWPCRAVLSEFVKTC-SVVYEGHFEFFVQSEVLRNTPPGDKEKVSKAMHRVMDHNQLFYCTNNEIVIGDMPKTNMDPIHAEIELKAQQSLYFLAHDMFPRFLNSRFGLSLIKQLRAREVAGEKPPINTVALDKNSSSSQFWLEMFKTMSETVSIGMVVADMNVPGCPLAYVNEGFKTLTGYGKENIGRNCKFLQGEETEGYMVEEIMHALQQHEPLCCKLHNHKADGRKFQNLLCLHPVFGKEGEYLYQDIQRIIPVDYTGDG-NLPPRVLDMSAI----PSTGSG 414          
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: A0A482RMZ2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RMZ2_9ARCH)

HSP 1 Score: 200 bits (509), Expect = 9.190e-58
Identity = 99/213 (46.48%), Postives = 131/213 (61.50%), Query Frame = 1
Query:  460 FTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWAEAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPIVSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGEQLPIKTVAYGKDPADPGYWMDLFRTMSESLRIAMVVSDMFVPGIPLVHVNEGFKYHTGYGKESIGKNCKFLQ 1098
            FTKIMW QDP++A R MLM+         F      ++ QTHLRF+ +  Q+   QG QQ+   R  H +   N +FYC T EI  G LN  +W  +   M  WQE S + LA+++F RF+E   S + +  L  RE  GEQLP +T A G +P    YWMDLF+ +SE++ I MV+SDM VPGIPL ++NEGF+  TGYGKE IG +C+FLQ
Sbjct:    4 FTKIMWLQDPLNACRAMLMEPMCREYFINFADGNCGLVVQTHLRFFDKVMQVRSAQGAQQLKKIRAFHMKKQKNEMFYCATTEIDYGSLNTLNWGLVFENMCLWQEQSAFMLAAEAFHRFLEHPSSVEMIVKLKQRELAGEQLPCRTAAAGVNPNSETYWMDLFKNVSETVSIGMVISDMTVPGIPLAYINEGFRAVTGYGKEKIGCSCRFLQ 216          
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: A0A482RNG8_9ARCH (PAS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNG8_9ARCH)

HSP 1 Score: 155 bits (393), Expect = 7.280e-41
Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 1
Query:    1 VKLTNYRKNGEKFQNLLSMKPVFDADGIYRYVIGVQFEIVQDQGLKKRLVQLDKLLRLLPSRLNLKSKASAQARGALAAKVTGEANQMIAAKEQILSAGEQREEQE 318
            VKLTNYRKNGE FQNLLSMKPVFDADGIYRYVIGVQFEI +D  LK+RL+QLDKLLRLLPS+LNL+SKASA+A+GA+A KVTGEANQ+I  KEQIL   +Q E QE
Sbjct:   94 VKLTNYRKNGEMFQNLLSMKPVFDADGIYRYVIGVQFEIKEDDKLKERLIQLDKLLRLLPSKLNLRSKASARAKGAMAVKVTGEANQLINNKEQILQQSKQMEIQE 199          
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Match: A0A7S3NL50_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NL50_9STRA)

HSP 1 Score: 165 bits (417), Expect = 5.770e-40
Identity = 139/476 (29.20%), Postives = 211/476 (44.33%), Query Frame = 1
Query:    1 VKLTNYRKNGEKFQNLLSMKPVFDADGIYRYVIGVQFEIVQDQGLKKRLVQLDKLLRLLPSRLNLKS---KASAQARGALAAKVTGEANQMIAAKEQILSAGEQREEQEAAASGTRPKGKYKKKKAGAGGAGGMGXXXXXXXXGTPPLNYDGTVFAFTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWAEAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPIVSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGE-----------------QLPIKTV-AYGKDPADPGYWMDLFRTMSESLR--IAMVVSDMFVPGIPLVHVNEGFKYHTGYGKESIGKNCKFLQGPATEGYMNTEIMEALRHAEPLFCKLHNHKADGSKFQCLLVLQPVFTP-EGEYKYQIGMQIDYNPNNPETPMMVMEMERVVRNLPQT 1356
            V LTNYRK+G  F+NLL+M+P+FDADGIYRY IGVQFEI     L+  L +LDKLL+LLP  +  +    +A+   +  L   VT  +  +   ++  +   ++ +                                                FA TKI W   P   L  ML D  G  ALD ++  + S L ++ L F    +++L+    +Q  A      +                                  +E  L  +   SF  F+   ++     AL  RE   +                 +  +KT+ +Y  +     +++D+   +S SL   + +VVSDM  PG+PL++ + GF   TGYGKE IG  C FLQGP +E Y+  EI++ALR+AE  + K+ N+K     FQC L L P+FT  + EY +QIG+QID      +    + ++   +R LP+T
Sbjct:  615 VLLTNYRKDGTLFKNLLTMRPIFDADGIYRYCIGVQFEIKDATRLQLELGRLDKLLQLLPCLVPFQGTIHEAAHLPQSCLDGTVTPTSPHIQDTEKNKIHKLQENQR-----------------------------------------------FAATKISWLLHPRKTLEIMLHDPLGIVALDKYMTRR-SPLGRSALEFCRIVEELLVFAQKEQAPAVANKFSKFE---TILTNXXXXXXXXXXXXXXXXXXXXXXXXRELWLNAIQKSSFRSFLNTFEAAQLFEALRARENEEDPTCANLLYASLYSGASCEKKLKTILSYSSN--QESFFLDMIHAISLSLGSDVGLVVSDMRTPGLPLIYTSSGFIGVTGYGKEQIGCPCSFLQGPKSEEYIIEEIVDALRYAESTYVKIINYKQTCEPFQCCLALCPIFTANKDEYIFQIGLQIDVTDPKRDQLSRLGKLADFLRFLPKT 1037          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10059.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YT73_9STRA1.440e-23676.68PAS/PAC sensor hybrid histidine kinase putative bl... [more]
D7FQX8_ECTSI3.630e-22369.64Helmchrome putative blue light receptor for photot... [more]
A0A126X2E1_9PHAE2.330e-22268.83Putative LOV domain-containing protein n=2 Tax=Scy... [more]
A0A126WYE1_SCYLO4.580e-21467.21Putative LOV domain-containing protein n=2 Tax=Scy... [more]
A0A7S1UBY0_9STRA1.130e-14249.06Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1UEB3_9STRA1.370e-12548.60Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6H5KP07_9PHAE3.350e-11547.73RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A482RMZ2_9ARCH9.190e-5846.48Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482RNG8_9ARCH7.280e-4179.25PAS domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A7S3NL50_9STRA5.770e-4029.20Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10059contigP-wetherbeei_contig10059:3..2242 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FQX8
PFAMsPAS_9,RGS
Model size1506
Max annot lvl2759|Eukaryota
KEGG koko:K20715
Hectar predicted targeting categoryother localisation
Exons4
Evalue5.95e-224
EggNOG OGsCOG2202@1|root,2S3IW@2759|Eukaryota
EC2.7.11.1
DescriptionPAS domain
Cds size1506
COG categoryT
BRITEko00000,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185852.346641-CDS-P-wetherbeei_contig10059:2..9891683185852.346641-CDS-P-wetherbeei_contig10059:2..989Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10059 3..989 +
1683185852.3608522-CDS-P-wetherbeei_contig10059:1208..13341683185852.3608522-CDS-P-wetherbeei_contig10059:1208..1334Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10059 1209..1334 +
1683185852.3821862-CDS-P-wetherbeei_contig10059:1492..15521683185852.3821862-CDS-P-wetherbeei_contig10059:1492..1552Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10059 1493..1552 +
1683185852.399994-CDS-P-wetherbeei_contig10059:1909..22421683185852.399994-CDS-P-wetherbeei_contig10059:1909..2242Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10059 1910..2242 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10059.1.1prot_P-wetherbeei_contig10059.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10059 3..2242 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10059.1.1

>prot_P-wetherbeei_contig10059.1.1 ID=prot_P-wetherbeei_contig10059.1.1|Name=mRNA_P-wetherbeei_contig10059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=502bp
VKLTNYRKNGEKFQNLLSMKPVFDADGIYRYVIGVQFEIVQDQGLKKRLV
QLDKLLRLLPSRLNLKSKASAQARGALAAKVTGEANQMIAAKEQILSAGE
QREEQEAAASGTRPKGKYKKKKAGAGGAGGMGGGMGGGMGGTPPLNYDGT
VFAFTKIMWQQDPVSALRYMLMDQHGYAALDGFLRLQGSVLAQTHLRFWA
EAQQILMTQGPQQMHAARELHRRMPHNALFYCTTNEIVVGQLNRTSWPPI
VSEMARWQEASLYFLASDSFARFMEANQSRDYVYALAHRERNGEQLPIKT
VAYGKDPADPGYWMDLFRTMSESLRIAMVVSDMFVPGIPLVHVNEGFKYH
TGYGKESIGKNCKFLQGPATEGYMNTEIMEALRHAEPLFCKLHNHKADGS
KFQCLLVLQPVFTPEGEYKYQIGMQIDYNPNNPETPMMVMEMERVVRNLP
QTTTGEAPKAQGARVGELEAALTRLAGPAGTSRRPSVGGGMAGMAGAGGG
AP
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mRNA from alignment at P-wetherbeei_contig10059:3..2242+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10059.1.1 ID=mRNA_P-wetherbeei_contig10059.1.1|Name=mRNA_P-wetherbeei_contig10059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2240bp|location=Sequence derived from alignment at P-wetherbeei_contig10059:3..2242+ (Phaeothamnion wetherbeei SAG_119_79)
GTCAAGCTGACCAACTACCGCAAGAATGGCGAGAAGTTCCAGAACCTGCT GTCAATGAAACCGGTCTTCGACGCCGACGGTATCTACCGCTATGTCATCG GCGTGCAGTTCGAGATAGTGCAAGACCAGGGCCTCAAGAAGCGGCTGGTA CAGCTCGACAAGCTGCTGCGGCTGCTCCCGAGCCGCCTGAACCTCAAGTC CAAGGCATCGGCTCAGGCACGCGGCGCACTCGCCGCCAAGGTCACCGGCG AGGCCAACCAGATGATCGCCGCCAAGGAGCAGATCCTCAGCGCCGGCGAG CAGCGGGAGGAGCAGGAGGCCGCTGCGTCCGGCACGCGCCCCAAGGGCAA GTACAAGAAGAAGAAAGCCGGCGCCGGCGGCGCCGGCGGCATGGGCGGCG GCATGGGCGGCGGCATGGGCGGCACACCCCCGCTCAACTACGATGGCACG GTTTTCGCCTTCACCAAGATCATGTGGCAGCAGGACCCTGTCTCGGCGCT GCGCTACATGCTGATGGACCAGCACGGCTATGCGGCGCTCGACGGTTTTC TGCGGCTGCAGGGATCGGTGCTGGCTCAGACACACCTGCGCTTCTGGGCG GAGGCGCAGCAGATCCTCATGACACAGGGGCCGCAGCAGATGCATGCGGC ACGCGAGCTGCACCGGCGCATGCCGCACAACGCGCTCTTCTACTGCACCA CCAACGAGATTGTGGTGGGGCAGCTGAACCGCACGTCCTGGCCGCCCATC GTCTCGGAGATGGCGCGCTGGCAGGAGGCGTCGCTGTACTTCCTGGCGTC GGACAGCTTTGCGCGCTTCATGGAGGCGAACCAGAGCCGCGACTACGTGT ACGCGCTGGCGCACCGGGAGCGCAACGGCGAGCAGCTGCCCATCAAAACA GTAGCGTACGGCAAAGACCCGGCGGACCCCGGCTACTGGATGGACCTCTT CCGCACTATGTCGGAGTCGCTGCGGATCGCCATGGTGGTGAGCGTGCGAA TATATGTCTTCTCTTTTTGCGGCTGGTTGCTAGAGCTACATTTCCATCTT CAACGGGTCGATTCTCCCCCCAGGTTCCTTTACTTGCCATATTTAGACAT GTCCCCGCCGTTCTTAACCCGTTTTCTCTTTCTTTTCTCGTTTTTCTTCT CCTCTATGTCCTCTTTCTCCTTCTCGTTGTTCTTTTTCCTTCTTCTCATT TTCCAGGTGTCGGACATGTTTGTGCCGGGCATCCCGCTGGTGCACGTCAA CGAGGGCTTCAAGTACCACACGGGCTACGGCAAGGAGTCCATCGGCAAGA ATTGCAAGTTCCTTCAGGGCCCCGCCACCGAGGTAAGAAGAGAGAAAGCA GGATGGTGGCGGAAAGTGCAGTCGTTCATGAGAGCGCCGCCTACTTTGAA CTGCTCTTTCTGATCTAACTGCTTCCTTTTTGAAACCATTTTCAGAACCG CCGTCCCTCCTCGCCTCCTCCCGGTGTCGGAAACCGTCAGGGGTACATGA ACACGGAGATCATGGAGGCGCTCCGCCACGCCGAGCCCCTCTTCTGCAAG GTGAGAAGAGAAGGAAAAGAGCCGTTACCGCCGCAAACACGGCAGCTGCT GCCGGGTTTCTGTCGCCGTCCGAAAGTGGTCGGCGCCGTTTGCCTGACTG TCAGTGCCGCCGTTGCTATGCCAGAGATGCGCTACCGCCGCTACCATTAA AGCGTCATCGCTAGCCGCTCGTGTCGCGCGTCTCTCTGTCGATTACCTTT CAGGTTTGCCGCGGCGTCGCAATCGTTGCCGTCGCCGCCACTCACTCAAT AACCGCTGCCCCTCCCTTCTCGTCGCCCTTCCTGCCGCCCGCCCTCGCCA CCAAACCGTTCCAAAATCCTCGAAACGCCGCCGCCTTGCAAAATTAACAA CAAACAGCTGCACAACCACAAGGCGGACGGCTCCAAGTTCCAGTGCCTGC TGGTGCTGCAACCGGTCTTCACCCCCGAGGGCGAGTATAAGTACCAGATC GGCATGCAGATCGACTACAACCCGAATAACCCGGAGACGCCCATGATGGT AATGGAGATGGAGCGTGTCGTGCGCAACCTGCCACAGACCACGACCGGCG AGGCGCCAAAGGCGCAGGGCGCCCGAGTCGGCGAGCTGGAGGCGGCACTG ACGCGCCTGGCGGGTCCCGCCGGCACCTCCCGCCGCCCGTCCGTCGGCGG CGGCATGGCCGGCATGGCGGGTGCCGGTGGTGGTGCCCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10059:3..2242+

>mRNA_P-wetherbeei_contig10059.1.1 ID=mRNA_P-wetherbeei_contig10059.1.1|Name=mRNA_P-wetherbeei_contig10059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1506bp|location=Sequence derived from alignment at P-wetherbeei_contig10059:3..2242+ (Phaeothamnion wetherbeei SAG_119_79)
GTCAAGCTGACCAACTACCGCAAGAATGGCGAGAAGTTCCAGAACCTGCT
GTCAATGAAACCGGTCTTCGACGCCGACGGTATCTACCGCTATGTCATCG
GCGTGCAGTTCGAGATAGTGCAAGACCAGGGCCTCAAGAAGCGGCTGGTA
CAGCTCGACAAGCTGCTGCGGCTGCTCCCGAGCCGCCTGAACCTCAAGTC
CAAGGCATCGGCTCAGGCACGCGGCGCACTCGCCGCCAAGGTCACCGGCG
AGGCCAACCAGATGATCGCCGCCAAGGAGCAGATCCTCAGCGCCGGCGAG
CAGCGGGAGGAGCAGGAGGCCGCTGCGTCCGGCACGCGCCCCAAGGGCAA
GTACAAGAAGAAGAAAGCCGGCGCCGGCGGCGCCGGCGGCATGGGCGGCG
GCATGGGCGGCGGCATGGGCGGCACACCCCCGCTCAACTACGATGGCACG
GTTTTCGCCTTCACCAAGATCATGTGGCAGCAGGACCCTGTCTCGGCGCT
GCGCTACATGCTGATGGACCAGCACGGCTATGCGGCGCTCGACGGTTTTC
TGCGGCTGCAGGGATCGGTGCTGGCTCAGACACACCTGCGCTTCTGGGCG
GAGGCGCAGCAGATCCTCATGACACAGGGGCCGCAGCAGATGCATGCGGC
ACGCGAGCTGCACCGGCGCATGCCGCACAACGCGCTCTTCTACTGCACCA
CCAACGAGATTGTGGTGGGGCAGCTGAACCGCACGTCCTGGCCGCCCATC
GTCTCGGAGATGGCGCGCTGGCAGGAGGCGTCGCTGTACTTCCTGGCGTC
GGACAGCTTTGCGCGCTTCATGGAGGCGAACCAGAGCCGCGACTACGTGT
ACGCGCTGGCGCACCGGGAGCGCAACGGCGAGCAGCTGCCCATCAAAACA
GTAGCGTACGGCAAAGACCCGGCGGACCCCGGCTACTGGATGGACCTCTT
CCGCACTATGTCGGAGTCGCTGCGGATCGCCATGGTGGTGTCGGACATGT
TTGTGCCGGGCATCCCGCTGGTGCACGTCAACGAGGGCTTCAAGTACCAC
ACGGGCTACGGCAAGGAGTCCATCGGCAAGAATTGCAAGTTCCTTCAGGG
CCCCGCCACCGAGGGGTACATGAACACGGAGATCATGGAGGCGCTCCGCC
ACGCCGAGCCCCTCTTCTGCAAGCTGCACAACCACAAGGCGGACGGCTCC
AAGTTCCAGTGCCTGCTGGTGCTGCAACCGGTCTTCACCCCCGAGGGCGA
GTATAAGTACCAGATCGGCATGCAGATCGACTACAACCCGAATAACCCGG
AGACGCCCATGATGGTAATGGAGATGGAGCGTGTCGTGCGCAACCTGCCA
CAGACCACGACCGGCGAGGCGCCAAAGGCGCAGGGCGCCCGAGTCGGCGA
GCTGGAGGCGGCACTGACGCGCCTGGCGGGTCCCGCCGGCACCTCCCGCC
GCCCGTCCGTCGGCGGCGGCATGGCCGGCATGGCGGGTGCCGGTGGTGGT
GCCCCC
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