mRNA_P-wetherbeei_contig10044.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI) HSP 1 Score: 188 bits (478), Expect = 3.060e-50 Identity = 131/286 (45.80%), Postives = 170/286 (59.44%), Query Frame = 1 Query: 7 GQREVQEIVLEADADDVDGTFEIDFDGAGGFTADWDISAADLQGGLEALYSVGRVTVEREVIAYAAAPA--ARGFSWRITYDTRPGELPLLAVDGNATAVPLVGTGVRLSVYALANGFAPDASTTVDNLLPGEAYHARVRAFSNVGDGVSSANTAASV--RGTNNAGEGVVPLTRAVTQLPPPPAIASVAAVSASQLFVALAPAEEAGAGRPALGYLVEWTSADDFGRNATKTVVVSNAAGVEHTQGDFRLWLAGIPTRRIPHDASAEDVAAAINAASRVGAVRVT 852 G EVQEI L +D +DGTF +DF AGGFTA WDISA D++ LE L +VG VTV R AAPA + G++W +T++T+ L L VDGN+T P+VG +LSV L G +P + + L+PGE Y ARV A + G G ++ AAS RG+NN G G+VP P P IA V AVSASQL VAL P + G ALGY VEWT+A++FG+N TK V VS+ + T+G FRL G T + H+ASA+ V A+ + V V V+ Sbjct: 10408 GVPEVQEIQLGGSSDALDGTFMVDFADAGGFTAAWDISAGDMEVLLEQLPTVGDVTVAR-----GAAPAGFSDGYTWTVTFETQVENLEPLFVDGNSTGRPIVGPDAQLSVVELRRGVSPSLALELAGLVPGETYVARVSAGNTAGYGPTTLADAASGGDRGSNNDGLGIVPFGVVARAAPQTPRIAGVTAVSASQLEVALEPPTDT-PGFEALGYKVEWTTAENFGKNETKLVTVSSDVN-DDTEGRFRLRFGGQATYPLQHNASADSVRDALEILATVAGVGVS 10686
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Match: A0A6H5JYH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH1_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.650e-48 Identity = 128/286 (44.76%), Postives = 167/286 (58.39%), Query Frame = 1 Query: 7 GQREVQEIVLEADADDVDGTFEIDFDGAGGFTADWDISAADLQGGLEALYSVGRVTVEREVIAYAAAPA--ARGFSWRITYDTRPGELPLLAVDGNATAVPLVGTGVRLSVYALANGFAPDASTTVDNLLPGEAYHARVRAFSNVGDGVSSANTAASV--RGTNNAGEGVVPLTRAVTQLPPPPAIASVAAVSASQLFVALAPAEEAGAGRPALGYLVEWTSADDFGRNATKTVVVSNAAGVEHTQGDFRLWLAGIPTRRIPHDASAEDVAAAINAASRVGAVRVT 852 G EVQEI L A +D +DGTF +DF GGFTA WDISA D++ LE L +VG VTV R AAPA + G++W +T++T+ L L VDGN+T P+VG +LSV L G +P + L+PGE Y ARV A + G G ++ A S RG+NN G G+VP P P IA V A+SASQL VAL P + G ALGY VEWT+A++FG+N TK V VS+ + T+G FRL G T + H+AS + V A+ + V V V+ Sbjct: 2933 GVPEVQEIQLGASSDALDGTFMVDFADGGGFTAAWDISAGDMEVLLEQLPTVGDVTVAR-----GAAPAGFSDGYTWTVTFETQVENLEPLFVDGNSTGRPIVGPDAQLSVVELRRGVSPSLVLELAGLVPGETYVARVSAGNTAGYGPTTLADATSGGDRGSNNDGLGIVPFEVVARAAPQTPRIAGVTAISASQLEVALEPPTDT-PGFEALGYKVEWTTAENFGKNETKLVTVSSDVD-DDTEGRFRLRFGGQTTYPLQHNASPDSVREALETLATVADVGVS 3211
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Match: A0A8K1FDN7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDN7_PYTOL) HSP 1 Score: 77.0 bits (188), Expect = 5.820e-12 Identity = 81/287 (28.22%), Postives = 128/287 (44.60%), Query Frame = 1 Query: 16 EVQEIVLEADADDVDGTFEIDF-------DGAGGFTADWDISAADLQGGLEALYSVGRVTVEREVIAYAAAPAARGFSWRITYDTRPGELPLLAVDGNATAVPLVGTGVRLSVYALANGFAPDASTTVDNLLPGEAYHARVRAFSNVGDGVSSANTAASVRGTNNAGEGVVPLTRAVTQLPPPPAIASVAAVSASQLFVALAPAEEAGAGRPALGYLVEWTSADDFGRNATKTVVVSNAAGVEHTQGDFRLWLAGIPTRRIPHDASAEDVAAAINAASRVGAVRVTR 855 EVQ++ A AD++ GTF+++F D A ++D +A D+Q L+ + +VGR+ V R G++W +T+ T G+LPLL +D A L G G +SV + G T+D L G+ Y+ +RAF+ +G + G+G +PL + P +I +S +QL V E G+ P Y+ E+ + FG K + N + G FRL + T + SA AAAI+ + V V+R Sbjct: 491 EVQQLSTSATADNIGGTFKVNFWNPVAQSDSA---IINFDDTAVDVQTKLQNIPTVGRLNVTR------TGNDQFGYTWMVTFLTNVGDLPLLQLD----ATSLTGAGAAVSVQEVQKGVDAPFEATIDGLFAGQDYY--IRAFAKNVNGYGAGTDL-----IQREGKGALPLATRIAGTPDTTSITGAWPLSGTQLGVRFTTPEAHGS--PITKYVFEYAVGNTFGVFPIKKFFILNPIENDLV-GTFRLQYGDVTTPLLSIHTSASAFAAAISQLPSLRPVTVSR 754
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Match: A0A0P1APD8_PLAHL (Immunoglobulin-like fold n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APD8_PLAHL) HSP 1 Score: 74.7 bits (182), Expect = 2.680e-11 Identity = 57/182 (31.32%), Postives = 90/182 (49.45%), Query Frame = 1 Query: 16 EVQEIVLEADADDVDGTFEIDFDGAGGFTADWDISAADLQGGLEALYSVGRVTVEREVIAYAAAPAARGFSWRITYDTRPGELPLLAVDGNATAVPLVGTGVRLSVYALANGFAPDASTTVDNLLPGEAYHARVRAFSNVGDGVSSANTAASVRGTNNAGEGVVPLTRAVTQLPPPPAIASV 561 EVQ + ++A ADD+ G F + F G + D +AAD++ L+AL ++GRV++ + G +W IT+ + G+LP L + + L GT + V L G TT++ L PG+ Y+ VRAF+ +G + TA RG G +PL + P PP I+ + Sbjct: 493 EVQILSIKASADDLSGYFALSFRSVGVALINVDDTAADVRSKLQALATIGRVSITQ------TKTVDHGTTWTITFLSNLGDLPALVIADKSY---LKGTKATVDVQELVKGVDVALETTIEGLRPGQDYY--VRAFARNENGYGGSTTALQQRG-----RGALPLLTTIATAPDPPGISGI 658
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Match: T0R4L6_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R4L6_SAPDV) HSP 1 Score: 68.6 bits (166), Expect = 3.990e-9 Identity = 85/299 (28.43%), Postives = 129/299 (43.14%), Query Frame = 1 Query: 1 GAGQREVQEIVLEADADDVDGTFEIDFDGAGGFTAD------WDISAADLQGGLEALYSVGRVTVEREVIAYAAAPAARGFSWRITYDTRPGELPLLAVDGNATAVPLVGTGVRLSVYALANGFAPDASTTVDNLLPGEAYHARVRAFSNVGDGVSSANTAASVRGTNNAGEGVVPLTRAVTQLPPP-PAIASVAAVSASQLFVALAPAEEAGAGRPALGYLVEWTSADDFGRNATKTVVVSNAAGVEHTQGDFRLWLAGIPTRRIPHDASAEDVAAAINAASRVGAVRVTRQVLFSDG 876 G+ EVQ I A + G F ++F TA ++ A+D+Q L+AL ++G V V R I G+ W +T+ + G LPLL++ GN L G G ++V + NG T + + R RA + +G S A G+G + L +A T PP P IAS+ VS SQL V P ++ Y +E T+ FG + V + + G F+L ++R+P DASA +AAA+N + V +R + G Sbjct: 507 GSAVYEVQSITTSATTGPIGGYFYLNFGAYYTSTASLGALLKYNELASDVQTKLQALPTIGSVNVSRTAIGL-------GYQWLVTFTSNMGPLPLLSLTGNF----LSGAGATITVAEVTNGVPAMFETVLGGVSSAAPLAVRARAQNGIGWSPGSNLLQAY-------GQGTMQL-QAYTHRPPTVPQIASILPVSFSQLQVTFVPPTDSS---DITSYEIEATTDAGFGTPMVVAIDVYSQVPNDML-GTFQLSYGSQLSQRLPVDASASALAAALNRLPTMRPVTASRLLFVLGG 782
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Match: A0A2R5GG89_9STRA (Receptor-type tyrosine-protein phosphatase F n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GG89_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 7.270e-9 Identity = 87/309 (28.16%), Postives = 136/309 (44.01%), Query Frame = 1 Query: 22 QEIVLEADADDVDGTFEIDFDGAGGFTADWDISAADLQGGLEALYSVGRVTVEREVIAYAAAPAARGFSWRITYDTRPGELPLLA-----VDGN----------ATAVPLVGTGVR----LSVYALANGFAPDASTTVDNLLPGEAYHARVRAFSNVGD--GVSSANTAASV-------RGTNNAGEGVVPLTRAVTQLPPPPAIASVAAVSASQLFVALAPAEEAGAGRPALGYLVEWTSADDFGRNATKTVVVSNAAGVEHTQGDFRLWLAGIPTRRIPHDASAEDVAAAINAASRVGAVRVTRQVL 864 Q + + ADADD+ GTF + F G G + +D S L+ LE + +VG V V RE + GF+W + + T G+ P L V G A +P + + + + + +L +G A + T +L+ G YH RV A++ VG G S+ AS + A + + P + PP ++A+ S QL +VEW D A + +VS+++ ++G F L L T IP+DAS+ ++ A + A S VGAV VTR+ L Sbjct: 6273 QSVTINADADDLGGTFYLSFAGRGTGSIPFDASPEVLRASLETIPAVGEVRVHRETVD-------NGFTWTVIFLTSLGDQPPLTPHHENVQGTNPTLTVSEVEAGRLPSMDSSQKDVAEVDIASLGSGTAY-SFTLPSDLIRGARYHVRVSAWNGVGHTYGPSAYAVPASTLLHAPFTEFNDLAAKALGPDALEFSWAAPPRSVAA----STEQL-------------------VVEW----DTNAAAKEVQIVSSSS--TGSEGTFTLSLGTSTTTPIPYDASSTEMQAVLEALSSVGAVSVTRESL 6544
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Match: A0A5A8EDT7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EDT7_CAFRO) HSP 1 Score: 59.3 bits (142), Expect = 4.390e-6 Identity = 88/299 (29.43%), Postives = 117/299 (39.13%), Query Frame = 1 Query: 109 WDISAADLQGGLEALYSVGRVTVEREVIAYAAAPAARGFSWRITYDTRPGE---------------LP---LLAVDGNATAVPLVGTGVRLSVYALANGFAPDASTTV--------DNLLPGEAYHARVRAFSNVGDGVSSANTAASVRGTNNAGEGVVPLTRAVTQLPPPPAIASVAAVSASQLFVALAPAEEAGAGRPALGYLVEWTSADDFGRNATKTVVVSNAAGVEHTQGD-----------------FRLWLAGIPTRRIPHDASAEDVAAAINAASRVGAVRVTRQVLFSDG 876 WD SAA + LEAL SVG V V R + GF+W IT+ + + LP + +V A PLV + +A AS TV D + G Y+ RVRA + +G+G A+V ++ VVP + A P P V AS L V E G GR Y VEW S+ F A +T +++ A QG+ F L G + R+P DASAE + AA+ S VG RV F G Sbjct: 10277 WDASAAQVARALEALPSVGSVVVARRA-------SGHGFAWDITFTSEVADDAQAMAEDASRAVAGLPADSVQSVPSGAVRAPLVANAAEI----VAEEDDATASVTVSARRTVVVDGVAEGAKYYVRVRAVNAIGEG-------AAVEAEDSP---VVPGSSA----PSAPTAVEVRPTGASSLAVTFDRPEFNG-GRAVSRYEVEWDSSRLFDSPARETRILAVPAASAAPQGEQLTVTTAFGSTAGRGGTFGLAFRG-QSARLPWDASAERMRAALAGLSTVGDARVVEVTRFPAG 10548
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Match: A0A5A8E3K0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3K0_CAFRO) HSP 1 Score: 58.9 bits (141), Expect = 5.870e-6 Identity = 88/299 (29.43%), Postives = 117/299 (39.13%), Query Frame = 1 Query: 109 WDISAADLQGGLEALYSVGRVTVEREVIAYAAAPAARGFSWRITYDTRPGE---------------LP---LLAVDGNATAVPLVGTGVRLSVYALANGFAPDASTTV--------DNLLPGEAYHARVRAFSNVGDGVSSANTAASVRGTNNAGEGVVPLTRAVTQLPPPPAIASVAAVSASQLFVALAPAEEAGAGRPALGYLVEWTSADDFGRNATKTVVVSNAAGVEHTQGD-----------------FRLWLAGIPTRRIPHDASAEDVAAAINAASRVGAVRVTRQVLFSDG 876 WD SAA + LEAL SVG V V R + GF+W IT+ + + LP + +V A PLV + +A AS TV D + G Y+ RVRA + +G+G A+V ++ VVP + A P P V AS L V E G GR Y VEW S+ F A +T +++ A QG+ F L G + R+P DASAE + AA+ S VG RV F G Sbjct: 10295 WDASAAQVARALEALPSVGSVVVARRA-------SGHGFAWDITFTSEVADDAQAMAEDASRAAAGLPADSVQSVPSGAVRAPLVANAAEI----VAEEDDATASVTVSARRTVVVDGVAEGAKYYVRVRAVNAIGEG-------AAVEAEDSP---VVPGSSA----PSVPTAVEVRPTGASSLAVTFDRPEFNG-GRAVSRYEVEWDSSRLFDSPARETRILAVPAASAAPQGEQLTVTTAFGSTAGRGGTFGLAFRG-QSARLPWDASAERMRAALAGLSTVGDARVVEVTRFPAG 10566
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Match: A0A5A8DUD1_CAFRO (Uncharacterized protein n=11 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUD1_CAFRO) HSP 1 Score: 58.9 bits (141), Expect = 5.870e-6 Identity = 88/299 (29.43%), Postives = 117/299 (39.13%), Query Frame = 1 Query: 109 WDISAADLQGGLEALYSVGRVTVEREVIAYAAAPAARGFSWRITYDTRPGE---------------LP---LLAVDGNATAVPLVGTGVRLSVYALANGFAPDASTTV--------DNLLPGEAYHARVRAFSNVGDGVSSANTAASVRGTNNAGEGVVPLTRAVTQLPPPPAIASVAAVSASQLFVALAPAEEAGAGRPALGYLVEWTSADDFGRNATKTVVVSNAAGVEHTQGD-----------------FRLWLAGIPTRRIPHDASAEDVAAAINAASRVGAVRVTRQVLFSDG 876 WD SAA + LEAL SVG V V R + GF+W IT+ + + LP + +V A PLV + +A AS TV D + G Y+ RVRA + +G+G A+V ++ VVP + A P P V AS L V E G GR Y VEW S+ F A +T +++ A QG+ F L G + R+P DASAE + AA+ S VG RV F G Sbjct: 10336 WDASAAQVARALEALPSVGSVVVARRA-------SGHGFAWDITFTSEVADDAQAMAEDASRAAAGLPADSVQSVPSGAVRAPLVANAAEI----VAEEDDATASVTVSARRTVVVDGVAEGAKYYVRVRAVNAIGEG-------AAVEAEDSP---VVPGSSA----PSVPTAVEVRPTGASSLAVTFDRPEFNG-GRAVSRYEVEWDSSRLFDSPARETRILAVPAASAAPQGEQLTVTTAFGSTAGRGGTFGLAFRG-QSARLPWDASAERMRAALAGLSTVGDARVVEVTRFPAG 10607 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10044.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10044.1.1 >prot_P-wetherbeei_contig10044.1.1 ID=prot_P-wetherbeei_contig10044.1.1|Name=mRNA_P-wetherbeei_contig10044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=295bp GAGQREVQEIVLEADADDVDGTFEIDFDGAGGFTADWDISAADLQGGLEAback to top mRNA from alignment at P-wetherbeei_contig10044:61..945+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10044.1.1 ID=mRNA_P-wetherbeei_contig10044.1.1|Name=mRNA_P-wetherbeei_contig10044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig10044:61..945+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10044:61..945+ >mRNA_P-wetherbeei_contig10044.1.1 ID=mRNA_P-wetherbeei_contig10044.1.1|Name=mRNA_P-wetherbeei_contig10044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig10044:61..945+ (Phaeothamnion wetherbeei SAG_119_79)back to top |