mRNA_P-wetherbeei_contig10038.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: D7G2Z0_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Z0_ECTSI) HSP 1 Score: 144 bits (364), Expect = 3.190e-40 Identity = 81/116 (69.83%), Postives = 94/116 (81.03%), Query Frame = 1 Query: 7 RQQLPPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDESEADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQK 354 R QLPP+WVDKVD VEEDVR IQ ++R+LSALHTKRLMV+FDESEA++ER++E T EVT LFR AE+QLK +M + G LT AE TVRNNIQRATARKLQ+LS FRTSQK Sbjct: 53 RHQLPPLWVDKVDGVEEDVRLIQLKLRELSALHTKRLMVTFDESEAERERDVEDATREVTALFRRAERQLKHLMGESAG-----LTPAEATVRNNIQRATARKLQSLSGGFRTSQK 163
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: A0A836CM56_9STRA (Soluble NSF attachment protein receptor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM56_9STRA) HSP 1 Score: 135 bits (341), Expect = 7.780e-37 Identity = 77/117 (65.81%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 7 RQQLPPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDE-SEADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQK 354 R QLPP WV++VDRV+ DVR IQ +MR LS LHTKRLMVSFD+ SE KE+EIE T E+TQ+FRHAE++LK ++ DG G TAA+ TVR NIQRATARKLQALS AFR++QK Sbjct: 50 RSQLPPAWVERVDRVDADVRTIQLKMRALSGLHTKRLMVSFDDVSEQHKEKEIELMTQEITQIFRHAERELKAIVGDGGGAR----TAADATVRGNIQRATARKLQALSIAFRSAQK 162
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: A0A835YLG5_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLG5_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.160e-34 Identity = 74/113 (65.49%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 19 PPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDE-SEADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQK 354 PPVWV+KVD V+ D+R+IQ +MR+LSALHTKRLMV+FD+ SE KER+IE T E+TQ+FRHAE++LK +M +G G GR E AE TVR N+Q+ATARKLQ LS AFR+SQK Sbjct: 54 PPVWVEKVDNVDADLRKIQMKMRELSALHTKRLMVTFDDASEQSKERDIEFMTQEITQIFRHAERELKKIMTEG-GGGRTE---AEATVRTNLQKATARKLQNLSMAFRSSQK 162
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: A0A7S3GW24_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GW24_9STRA) HSP 1 Score: 112 bits (281), Expect = 7.020e-28 Identity = 62/117 (52.99%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 4 ARQQLPPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDESEADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQK 354 A+ LPP WVD+++ EEDV +IQ R+R+LSALHTKRLMV+F+ EA +EREI+ +T E+T LF HAE LK G+ P L+ A+ TVR N+Q + ARK+Q LS +FR++QK Sbjct: 47 AKNSLPPAWVDQIEAAEEDVTKIQARIRELSALHTKRLMVNFETDEAHQEREIDGKTREITDLFHHAENVLKRF---GKQSEDPNLSVADRTVRKNMQMSMARKIQGLSMSFRSTQK 160
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: A0A7S0SYL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SYL7_9STRA) HSP 1 Score: 105 bits (261), Expect = 6.380e-25 Identity = 58/116 (50.00%), Postives = 82/116 (70.69%), Query Frame = 1 Query: 4 ARQQLPPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDESEADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQ 351 AR LPP WVDK+ ++E + +IQ ++++L+ALH+KRLMV+F+ E +EREI+ +T E+T LFR AEK L+ G + +A EL VRNNIQR+ A+KLQ+LS +FR SQ Sbjct: 54 ARNTLPPAWVDKIQLIDEYINKIQPKIKELNALHSKRLMVNFETDELQQEREIDIKTQEITTLFRSAEKLLQKFSTQGD---ENKTSAEELKVRNNIQRSNAKKLQSLSQSFRQSQ 166
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: A0A7S2SRN9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRN9_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.960e-24 Identity = 59/116 (50.86%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 7 RQQLPPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDESEADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQK 354 R LPP WVD D++E D+R++ + +L+ALHTKRLMV+FDESEA ++REI+++T +T FRH E LK V ND G ++ VR NIQRATA+KLQ S FR+ QK Sbjct: 46 RVNLPPHWVDTFDQMELDLRQLDALVEELAALHTKRLMVTFDESEARRDREIQSKTRAITDCFRHMEVSLKRVANDSDGD------ESDAKVRGNIQRATAKKLQERSHKFRSMQK 155
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: F0Y7H9_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7H9_AURAN) HSP 1 Score: 97.8 bits (242), Expect = 4.200e-22 Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 16 LPPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDES-EADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQK 354 LPPVWVD V+RVE DV +I+R RDL+ALHTKRLMVSFD++ EA + EI + E T+LFR E LK V G +L+ +E T+R+NIQR+ A ++QAL+ FR +QK Sbjct: 57 LPPVWVDLVERVEGDVLKIERATRDLAALHTKRLMVSFDDAGEAALDDEIAAKQREATKLFRACESSLKRVA----AHGGDDLSDSERTIRSNIQRSVAMRIQALNTDFRKAQK 166
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: A0A7S3XU54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU54_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 5.470e-22 Identity = 61/108 (56.48%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 34 DKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDES-EADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQK 354 D VD+VEED+R+IQ ++R L+ LHT+RLMV+FDE EAD++REI+ TA VT LFRHAE L+ V +G+ G A+ VR NIQR+ ARKLQ+LS FR SQK Sbjct: 1 DMVDQVEEDIRQIQEKIRALADLHTQRLMVTFDEGHEADRDREIDQATAAVTGLFRHAEGVLRQVGTEGKAAGGGG-GQADARVRENIQRSLARKLQSLSMNFRNSQK 107
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: A0A7S3JZH1_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZH1_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 8.810e-22 Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 1 Query: 16 LPPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDES-EADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQ 351 LPP+WVD VD VE D+ +I++ MRDL A+HTKRLMVSFD++ EA ++EIE +T E T+LFR E LK + G +L+ +E T+R NIQR A ++Q L+ FR SQ Sbjct: 60 LPPIWVDLVDSVESDIGKIEKAMRDLQAVHTKRLMVSFDDANEAAMDQEIEGKTREATRLFRSCESSLKRIALTGN-----DLSDSERTIRANIQRGMALRIQRLNQDFRRSQ 167
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Match: A0A4D9D7A2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7A2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.250e-21 Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 4 ARQQLPPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDESEADKEREIETRTAEVTQLFRHAEKQLKLVMNDGQGPGRPELTAAELTVRNNIQRATARKLQALSAAFRTSQK 354 AR QLPP WVD VDRV+ +I+ +M++L ALH KRL+V FD+SEA +ER+I+ T E+T + R AE LK + G G E V N+Q++ A+++QALS FR SQK Sbjct: 52 ARMQLPPAWVDLVDRVDTLTAQIEAKMKELEALHRKRLLVGFDDSEAARERDIDFMTQEITGMLREAESALKQMG----GGGADXXXGTEKLVTRNVQKSMAKRIQALSIEFRASQK 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10038.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10038.1.1 >prot_P-wetherbeei_contig10038.1.1 ID=prot_P-wetherbeei_contig10038.1.1|Name=mRNA_P-wetherbeei_contig10038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp MARQQLPPVWVDKVDRVEEDVREIQRRMRDLSALHTKRLMVSFDESEADKback to top mRNA from alignment at P-wetherbeei_contig10038:1422..2085+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10038.1.1 ID=mRNA_P-wetherbeei_contig10038.1.1|Name=mRNA_P-wetherbeei_contig10038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=664bp|location=Sequence derived from alignment at P-wetherbeei_contig10038:1422..2085+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10038:1422..2085+ >mRNA_P-wetherbeei_contig10038.1.1 ID=mRNA_P-wetherbeei_contig10038.1.1|Name=mRNA_P-wetherbeei_contig10038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig10038:1422..2085+ (Phaeothamnion wetherbeei SAG_119_79)back to top |