mRNA_P-wetherbeei_contig100.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: A0A836C9V8_9STRA (Dtdp-glucose 4,6-dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9V8_9STRA) HSP 1 Score: 220 bits (561), Expect = 2.320e-59 Identity = 99/127 (77.95%), Postives = 118/127 (92.91%), Query Frame = 3 Query: 378 TAEQAGTIRRFVHVSTDEVYGEGDSDCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQGQV 758 +A+ GT+RRF+HVSTDEVYGEG+ + +PM E++VLEPTNPYAATKAGAEFIAK+Y RSF LP+IITRGNNVYGPHQYPEK++PKFINQL+RGRPLTVHG G NTRNFL+V+DVARAFDVI+H+G+V Sbjct: 140 SAKTLGTVRRFIHVSTDEVYGEGEHNEEPMFEDHVLEPTNPYAATKAGAEFIAKAYYRSFKLPIIITRGNNVYGPHQYPEKMIPKFINQLLRGRPLTVHGDGRNTRNFLYVQDVARAFDVILHKGEV 266
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: A0A7S2RGU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGU2_9STRA) HSP 1 Score: 208 bits (529), Expect = 8.900e-57 Identity = 98/128 (76.56%), Postives = 113/128 (88.28%), Query Frame = 3 Query: 378 TAEQAGTIRRFVHVSTDEVYGEG-DSDCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQGQV 758 +A+ TIRRF+HVSTDEVYGEG D D PM E +VLEPTNPYAATKAGAEF+ KSY RSF LP IITRGNNVYGPHQ+PEK++PKFINQL+R RP+T+HG G+NTRNFLFVEDVARAFDVI+H+G+V Sbjct: 118 SAKNCETIRRFIHVSTDEVYGEGEDFDAKPMDEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCIITRGNNVYGPHQFPEKLIPKFINQLLRDRPVTLHGDGSNTRNFLFVEDVARAFDVILHKGEV 245
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: A0A7S0BW56_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BW56_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.390e-55 Identity = 92/128 (71.88%), Postives = 114/128 (89.06%), Query Frame = 3 Query: 378 TAEQAGTIRRFVHVSTDEVYGEGDS-DCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQGQV 758 +A+ TI+RF+HVSTDEVYGEG++ + DPM+EN+VLEPTNPYAATKAGAEF+ KSY RSF +P IITRGNNVYGPHQ+PEK++PKF+NQL+R P+T+HG G NTRNFL+VEDVARAFDVI+H+ +V Sbjct: 33 SAKNCATIKRFIHVSTDEVYGEGETFETDPMMENHVLEPTNPYAATKAGAEFLVKSYHRSFKMPCIITRGNNVYGPHQFPEKLIPKFVNQLIRETPVTLHGDGTNTRNFLYVEDVARAFDVILHKAKV 160
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: W7TPP3_9STRA (Rhamnose biosynthetic enzyme expressed n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPP3_9STRA) HSP 1 Score: 207 bits (527), Expect = 6.870e-55 Identity = 94/118 (79.66%), Postives = 110/118 (93.22%), Query Frame = 3 Query: 399 IRRFVHVSTDEVYGEGDSDCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQG 752 I+RF+HVSTDEVYGEG +D +PM E+ VLEPTNPYAATKAGAEFIAKSY RSFNLP+IITRGNNVYGPHQYPEK++PKF+N LMR RP+T+HG+G NTRNFL+VEDVARAF+VI+H+G Sbjct: 180 IKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRG 297
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: A0A6H5KQM4_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM4_9PHAE) HSP 1 Score: 205 bits (521), Expect = 1.690e-54 Identity = 94/118 (79.66%), Postives = 107/118 (90.68%), Query Frame = 3 Query: 399 IRRFVHVSTDEVYGEGDSDCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQG 752 I+RFVHVSTDEVYGEG+ D +PM E+NVLEPTNPYAATKAGAEFIAK+Y RSFNLPVIITRGNNVYGPHQYPEK++PKFINQLMRG+ LT+HG+G+N RNFL V DVA AF+ I+H G Sbjct: 140 IKRFVHVSTDEVYGEGEHDQEPMFEDNVLEPTNPYAATKAGAEFIAKAYFRSFNLPVIITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGSNKRNFLHVADVATAFEKILHAG 257
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: D8LB01_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB01_ECTSI) HSP 1 Score: 205 bits (521), Expect = 2.400e-54 Identity = 94/118 (79.66%), Postives = 107/118 (90.68%), Query Frame = 3 Query: 399 IRRFVHVSTDEVYGEGDSDCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQG 752 I+RFVHVSTDEVYGEG+ D +PM E+NVLEPTNPYAATKAGAEFIAK+Y RSFNLPVIITRGNNVYGPHQYPEK++PKFINQLMRG+ LT+HG+G+N RNFL V DVA AF+ I+H G Sbjct: 140 IKRFVHVSTDEVYGEGEHDQEPMFEDNVLEPTNPYAATKAGAEFIAKAYFRSFNLPVIITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGSNKRNFLHVADVATAFEKILHAG 257
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: A0A7S2CKW6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKW6_9STRA) HSP 1 Score: 204 bits (519), Expect = 3.390e-54 Identity = 94/120 (78.33%), Postives = 108/120 (90.00%), Query Frame = 3 Query: 399 IRRFVHVSTDEVYGEGDSDCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQGQV 758 I+RF+HVSTDEVYGEG DPM E +VLEPTNPYAATKAGAEF+ KSY RSF+LPVIITRGNNVYGPHQYPEK++PKFINQL RGR +T+HG+G NTRNFL+VEDVARAF+VI+ +GQV Sbjct: 131 IKRFIHVSTDEVYGEGGETEDPMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFDLPVIITRGNNVYGPHQYPEKIIPKFINQLQRGRAVTLHGTGQNTRNFLYVEDVARAFEVILFKGQV 250
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: A0A4D9D847_9STRA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D847_9STRA) HSP 1 Score: 205 bits (522), Expect = 5.280e-54 Identity = 95/119 (79.83%), Postives = 109/119 (91.60%), Query Frame = 3 Query: 399 IRRFVHVSTDEVYGEGDSDCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQGQ 755 IRRFVHVSTDEVYGEG + +PM E+NVLEPTNPYAATKAGAEF+AKSY RSFNLPVIITRGNNVYGPHQYPEK++PKFIN L+RGR LT+HG+G NTRNFL+V DVARA+DV++H G+ Sbjct: 137 IRRFVHVSTDEVYGEGAAGQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLLRGRQLTLHGNGLNTRNFLYVTDVARAYDVVLHFGE 255
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: A0A6V2K0F2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2K0F2_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.100e-53 Identity = 94/128 (73.44%), Postives = 111/128 (86.72%), Query Frame = 3 Query: 378 TAEQAGTIRRFVHVSTDEVYGEG-DSDCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQGQV 758 +A + TI+RF+HVSTDEVYGEG D + DPM E +VLEPTNPYAATKAGAEF+ KSY RSF LPVI+TRGNNVYGPHQYPEK++PKF NQL+R PLT+HG G+NTRNFL+V DVA AF+VI+H+GQV Sbjct: 125 SANRCPTIKRFIHVSTDEVYGEGEDFETDPMQEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPVILTRGNNVYGPHQYPEKLIPKFTNQLLRDMPLTLHGDGSNTRNFLYVTDVANAFEVILHKGQV 252
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Match: F0Y3X2_AURAN (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3X2_AURAN) HSP 1 Score: 199 bits (507), Expect = 5.250e-53 Identity = 91/127 (71.65%), Postives = 113/127 (88.98%), Query Frame = 3 Query: 381 AEQAGTIRRFVHVSTDEVYGEGDS-DCDPMLENNVLEPTNPYAATKAGAEFIAKSYLRSFNLPVIITRGNNVYGPHQYPEKVVPKFINQLMRGRPLTVHGSGNNTRNFLFVEDVARAFDVIMHQGQV 758 A + +I+RFVHVSTDEVYGEG++ + +PM+E++VLEPTNPYAATKA AEF+ KSY RSF LP+IITRGNNVYGPHQ+PEK++PKF+NQL RGRP+T+HG+G NTRNFL+VEDVARAFD I+H+ V Sbjct: 107 AAKVHSIKRFVHVSTDEVYGEGENMETEPMIEDHVLEPTNPYAATKAAAEFLVKSYHRSFQLPIIITRGNNVYGPHQFPEKLIPKFVNQLARGRPVTLHGTGANTRNFLYVEDVARAFDCILHKAAV 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig100.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig100.2.2 >prot_P-wetherbeei_contig100.2.2 ID=prot_P-wetherbeei_contig100.2.2|Name=mRNA_P-wetherbeei_contig100.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=421bp MEQNSPNSPNDKLYGHISDSPSTNPAETDPVAEVAYDAAETARVVAAARAback to top mRNA from alignment at P-wetherbeei_contig100:5694..10733- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig100.2.2 ID=mRNA_P-wetherbeei_contig100.2.2|Name=mRNA_P-wetherbeei_contig100.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5040bp|location=Sequence derived from alignment at P-wetherbeei_contig100:5694..10733- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig100:5694..10733- >mRNA_P-wetherbeei_contig100.2.2 ID=mRNA_P-wetherbeei_contig100.2.2|Name=mRNA_P-wetherbeei_contig100.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1263bp|location=Sequence derived from alignment at P-wetherbeei_contig100:5694..10733- (Phaeothamnion wetherbeei SAG_119_79)back to top |