mRNA_P-wetherbeei_contig10.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10.6.1
Unique NamemRNA_P-wetherbeei_contig10.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: A0A6V1XB78_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XB78_HETAK)

HSP 1 Score: 201 bits (511), Expect = 5.280e-61
Identity = 89/136 (65.44%), Postives = 111/136 (81.62%), Query Frame = 1 
Query:  121 CCNTSMGRRRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYAYSEEHAPVW 528
            C N +M +   KRL +GRSS+HGWGAF   P  RNEF+YEYTGEL+SQDEADRRGK+YD+L+CSFLFNLN D VVDATR G+KIKFANH   PNC+ KIV+V+G H+IG+FAK+D+  GEE++FDY Y+++ AP W
Sbjct:   90 CQNVAMQKGLRKRLAVGRSSVHGWGAFLKAPARRNEFVYEYTGELVSQDEADRRGKIYDQLNCSFLFNLNADLVVDATRKGNKIKFANHSKNPNCFTKIVKVNGDHKIGVFAKKDLRPGEELSFDYLYTKDLAPSW 225
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: A0A7S2R4X4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4X4_9STRA)

HSP 1 Score: 179 bits (455), Expect = 6.820e-54
Identity = 81/119 (68.07%), Postives = 103/119 (86.55%), Query Frame = 1 
Query:  151 HKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYAYS 507
            HK++++GRS IHGWGAF +EP ++++ IYEYTGELISQ+EADRRGK+YDKL CSFLFNLN++ VVDATR G+KIKFANH    NCYA+I  V+G HRIGIFA+R+IA GEE++F+Y+ S
Sbjct:    3 HKKIVVGRSCIHGWGAFLSEPAKQHDLIYEYTGELISQNEADRRGKIYDKLKCSFLFNLNDELVVDATRKGNKIKFANHFDDANCYARIKLVNGDHRIGIFAQREIAEGEELSFNYSKS 121
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: A0A5E4C3B3_MARMO ([Histone H3]-lysine(27) N-trimethyltransferase n=4 Tax=Euteleostomi TaxID=117571 RepID=A0A5E4C3B3_MARMO)

HSP 1 Score: 177 bits (450), Expect = 4.120e-52
Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 1 
Query:  121 CCNTSMGRRRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYAYSEEHA 519
            C N S+ R   K LL+  S + GWG F  +P+++NEFI EY GE+ISQDEADRRGK+YDK  CSFLFNLN D VVDATR G+KI+FANH   PNCYAK++ V+G HRIGIFAKR I  GEE+ FDY YS+  A
Sbjct:   66 CKNCSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADA 198
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: F0XVI4_AURAN (SET domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVI4_AURAN)

HSP 1 Score: 173 bits (438), Expect = 1.790e-51
Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = 1 
Query:  145 RRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYA 501
            RRHKR+ +GRS  HGWGAF  E     + + EY GEL+SQDEADRRGK+YDKL+CSFLFNL+++ VVDATR G+K+KFANHHA PNC A++  VDG HRIG+FAKR+IA GEE+ F+Y+
Sbjct:    5 RRHKRVAIGRSCTHGWGAFALERCRVGDLVGEYRGELVSQDEADRRGKIYDKLNCSFLFNLDDELVVDATRKGAKMKFANHHADPNCAARVALVDGDHRIGLFAKREIAPGEELYFNYS 123
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: W5QBZ2_SHEEP ([Histone H3]-lysine(27) N-trimethyltransferase n=1 Tax=Ovis aries TaxID=9940 RepID=W5QBZ2_SHEEP)

HSP 1 Score: 177 bits (450), Expect = 4.040e-51
Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 1 
Query:  121 CCNTSMGRRRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYAYSEEHA 519
            C N S+ R   K LL+  S + GWG F  +P+++NEFI EY GE+ISQDEADRRGK+YDK  CSFLFNLN D VVDATR G+KI+FANH   PNCYAK++ V+G HRIGIFAKR I  GEE+ FDY YS+  A
Sbjct:  144 CKNCSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADA 276
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: UPI0018989CB1 (histone-lysine N-methyltransferase E(z)-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI0018989CB1)

HSP 1 Score: 172 bits (436), Expect = 1.310e-50
Identity = 82/128 (64.06%), Postives = 95/128 (74.22%), Query Frame = 1 
Query:  121 CCNTSMGRRRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYAY 504
            C N S+ R   K LL+  S + GWG F  E  ++NEFI EY GE+ISQDEADRRGK+YDK  CSFLFNLN D VVDATR G+KI+FANH   PNCYAK++ V+G HRIGIFAKR I  GEE+ FDY Y
Sbjct:   21 CKNVSVQRGLRKHLLLAPSDVAGWGIFLKETAQKNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKGNKIRFANHSINPNCYAKVMMVNGDHRIGIFAKRHIQSGEELFFDYRY 148
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: A0A060Y6L1_ONCMY ([Histone H3]-lysine(27) N-trimethyltransferase n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060Y6L1_ONCMY)

HSP 1 Score: 175 bits (443), Expect = 1.630e-50
Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 1 
Query:  121 CCNTSMGRRRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYAYSEEHA 519
            C N S+ R   K LL+  S++ GWG F  E +++NEFI EY GELISQDEADRRG++YDK   SFLFNLN D VVDATR G+KI+FANH   PNCYAK+V V+G HRIGIFAKR I  GEE+ FDY YS++ A
Sbjct:  108 CKNCSIQRGLKKHLLLAPSNVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGRIYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAILQGEELFFDYRYSQDDA 240
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: UPI0005296AE1 (histone-lysine N-methyltransferase EZH2 n=2 Tax=Amniota TaxID=32524 RepID=UPI0005296AE1)

HSP 1 Score: 177 bits (450), Expect = 1.750e-50
Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 1 
Query:  121 CCNTSMGRRRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYAYSEEHA 519
            C N S+ R   K LL+  S + GWG F  +P+++NEFI EY GE+ISQDEADRRGK+YDK  CSFLFNLN D VVDATR G+KI+FANH   PNCYAK++ V+G HRIGIFAKR I  GEE+ FDY YS+  A
Sbjct:  199 CKNCSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADA 331
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: K9KB59_HORSE ([Histone H3]-lysine(27) N-trimethyltransferase (Fragment) n=8 Tax=Boreoeutheria TaxID=1437010 RepID=K9KB59_HORSE)

HSP 1 Score: 177 bits (450), Expect = 3.040e-50
Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 1 
Query:  121 CCNTSMGRRRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYAYSEEHA 519
            C N S+ R   K LL+  S + GWG F  +P+++NEFI EY GE+ISQDEADRRGK+YDK  CSFLFNLN D VVDATR G+KI+FANH   PNCYAK++ V+G HRIGIFAKR I  GEE+ FDY YS+  A
Sbjct:  221 CKNCSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADA 353
[Close]
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Match: A0A7R9YDH7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDH7_9STRA)

HSP 1 Score: 184 bits (467), Expect = 4.730e-50
Identity = 86/142 (60.56%), Postives = 107/142 (75.35%), Query Frame = 1 
Query:  118 PCCNTSMGRRRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELISQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCYAKIVRVDGGHRIGIFAKRDIAHGEEITFDYAYSEE-HAPVWHAPA 540
            PCCN+ M    HKR+ +GRSSIHGWG F  E I +NEF+YEY G++ISQ EADRRGK+YDKL+CSFLFNLN+  VVDAT  GSKI+FANH   PNCYA++  ++G   IGI+A++ I   EEITFDYAY +E   P+W  P+
Sbjct:  560 PCCNSKMLYGLHKRVSVGRSSIHGWGVFARETIAKNEFVYEYRGDVISQKEADRRGKIYDKLNCSFLFNLNDHYVVDATMYGSKIRFANHSDNPNCYARVESMNGQDHIGIYARKKIFAEEEITFDYAYVQEPDGPIWSLPS 701
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1XB78_HETAK5.280e-6165.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2R4X4_9STRA6.820e-5468.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5E4C3B3_MARMO4.120e-5263.16[Histone H3]-lysine(27) N-trimethyltransferase n=4... [more]
F0XVI4_AURAN1.790e-5165.55SET domain-containing protein (Fragment) n=1 Tax=A... [more]
W5QBZ2_SHEEP4.040e-5163.16[Histone H3]-lysine(27) N-trimethyltransferase n=1... [more]
UPI0018989CB11.310e-5064.06histone-lysine N-methyltransferase E(z)-like n=1 T... [more]
A0A060Y6L1_ONCMY1.630e-5063.16[Histone H3]-lysine(27) N-trimethyltransferase n=1... [more]
UPI0005296AE11.750e-5063.16histone-lysine N-methyltransferase EZH2 n=2 Tax=Am... [more]
K9KB59_HORSE3.040e-5063.16[Histone H3]-lysine(27) N-trimethyltransferase (Fr... [more]
A0A7R9YDH7_9STRA4.730e-5060.56Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10contigP-wetherbeei_contig10:14786..17848 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog8010.XP_010888453.1
Preferred nameEZH2
PFAMsEZH2_WD-Binding,SET
Model size780
Max annot lvl33208|Metazoa
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11430,ko:K17451
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko05206,map00310,map05206
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000228,GO:0000278,GO:0000302,GO:0000785,GO:0000786,GO:0000790,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000978,GO:0000979,GO:0000981,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001889,GO:0001894,GO:0001932,GO:0001934,GO:0003006,GO:0003008,GO:0003012,GO:0003299,GO:0003300,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0003723,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006723,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007049,GO:0007275,GO:0007276,GO:0007281,GO:0007346,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007507,GO:0008104,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009605,GO:0009611,GO:0009636,GO:0009653,GO:0009719,GO:0009790,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010717,GO:0010718,GO:0010720,GO:0010948,GO:0010975,GO:0010976,GO:0014013,GO:0014070,GO:0014834,GO:0014887,GO:0014888,GO:0014896,GO:0014897,GO:0014898,GO:0016043,GO:0016278,GO:0016279,GO:0016458,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0017145,GO:0018022,GO:0018024,GO:0018193,GO:0018205,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019953,GO:0021549,GO:0021695,GO:0022008,GO:0022037,GO:0022402,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0023057,GO:0030030,GO:0030154,GO:0030182,GO:0030856,GO:0030857,GO:0030902,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031099,GO:0031100,GO:0031101,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031344,GO:0031346,GO:0031399,GO:0031401,GO:0031490,GO:0031519,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032784,GO:0032785,GO:0032989,GO:0032990,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033301,GO:0033365,GO:0033554,GO:0033674,GO:0034243,GO:0034244,GO:0034502,GO:0034599,GO:0034613,GO:0034614,GO:0034641,GO:0034708,GO:0034968,GO:0035097,GO:0035098,GO:0035186,GO:0035295,GO:0035690,GO:0035983,GO:0035984,GO:0036211,GO:0036333,GO:0040007,GO:0040011,GO:0040029,GO:0042054,GO:0042060,GO:0042078,GO:0042127,GO:0042221,GO:0042246,GO:0042325,GO:0042327,GO:0042330,GO:0042335,GO:0042493,GO:0042542,GO:0042592,GO:0042752,GO:0043021,GO:0043085,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043403,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043414,GO:0043433,GO:0043500,GO:0043547,GO:0043549,GO:0043565,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044728,GO:0044815,GO:0044877,GO:0045120,GO:0045448,GO:0045595,GO:0045596,GO:0045597,GO:0045604,GO:0045605,GO:0045664,GO:0045666,GO:0045682,GO:0045683,GO:0045786,GO:0045814,GO:0045859,GO:0045860,GO:0045892,GO:0045930,GO:0045934,GO:0045937,GO:0046483,GO:0046677,GO:0046974,GO:0046976,GO:0048385,GO:0048387,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048565,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048732,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048871,GO:0048872,GO:0050767,GO:0050769,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051567,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0055123,GO:0060249,GO:0060255,GO:0060284,GO:0060322,GO:0061008,GO:0061564,GO:0061647,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070301,GO:0070314,GO:0070316,GO:0070317,GO:0070727,GO:0070734,GO:0070878,GO:0070887,GO:0071168,GO:0071236,GO:0071310,GO:0071407,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0072091,GO:0072359,GO:0080090,GO:0090304,GO:0097159,GO:0097237,GO:0097421,GO:0097485,GO:0098532,GO:0098727,GO:0120035,GO:0120036,GO:0120039,GO:0140096,GO:0140110,GO:1900006,GO:1901360,GO:1901363,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902275,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902692,GO:1902806,GO:1902807,GO:1903506,GO:1903507,GO:1904772,GO:1905269,GO:1990234,GO:1990837,GO:1990841,GO:2000026,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000177,GO:2001141,GO:2001252
Exons4
Evalue2.04e-50
EggNOG OGsCOG2940@1|root,KOG1079@2759|Eukaryota,38DMC@33154|Opisthokonta,3BB21@33208|Metazoa,3CR6U@33213|Bilateria,480I1@7711|Chordata,495NA@7742|Vertebrata,4A0IU@7898|Actinopterygii
EC2.1.1.43
DescriptionEnhancer of zeste homolog 2 (Drosophila)
Cds size447
COG categoryK
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10.6.1prot_P-wetherbeei_contig10.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10 16695..17623 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185848.8210921-UTR-P-wetherbeei_contig10:14785..148681683185848.8210921-UTR-P-wetherbeei_contig10:14785..14868Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10 14786..14868 +
1683185848.8506992-UTR-P-wetherbeei_contig10:16669..166941683185848.8506992-UTR-P-wetherbeei_contig10:16669..16694Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10 16670..16694 +
1683185848.8937385-UTR-P-wetherbeei_contig10:17623..178481683185848.8937385-UTR-P-wetherbeei_contig10:17623..17848Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10 17624..17848 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185848.8615165-CDS-P-wetherbeei_contig10:16694..168501683185848.8615165-CDS-P-wetherbeei_contig10:16694..16850Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10 16695..16850 +
1683185848.871803-CDS-P-wetherbeei_contig10:17090..173321683185848.871803-CDS-P-wetherbeei_contig10:17090..17332Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10 17091..17332 +
1683185848.8824024-CDS-P-wetherbeei_contig10:17574..176231683185848.8824024-CDS-P-wetherbeei_contig10:17574..17623Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10 17575..17623 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10.6.1

>prot_P-wetherbeei_contig10.6.1 ID=prot_P-wetherbeei_contig10.6.1|Name=mRNA_P-wetherbeei_contig10.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp
MPRPCCNTSMGRRRHKRLLMGRSSIHGWGAFTAEPIERNEFIYEYTGELI
SQDEADRRGKMYDKLDCSFLFNLNEDCVVDATRTGSKIKFANHHAQPNCY
AKIVRVDGGHRIGIFAKRDIAHGEEITFDYAYSEEHAPVWHAPAKRSA*
back to top

mRNA from alignment at P-wetherbeei_contig10:14786..17848+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10.6.1 ID=mRNA_P-wetherbeei_contig10.6.1|Name=mRNA_P-wetherbeei_contig10.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3063bp|location=Sequence derived from alignment at P-wetherbeei_contig10:14786..17848+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCGACAATGGCGGCGCCGCCACCAGCAGCCGGAGTGCTCCCATGCCGC
TGTCAGGCGGCGGTGTGAGGATCAGCAACATCAGCGGCTCCGCCGCTGCT
GCCGCCACCGCCGGCAGCGATAGCGGAGTAGCTCCGAAACCGCCGTCTCT
CTGTTCGTGGCAACGCTGGGGCGAGGAGAGCCTGGGGCTGCGCGGTGAAA
CGACGTGCCAGACGGTCGGTGAGAGCTTCGAGCTACTTTTTTGCCGCCGC
TGCTACACGTACGACTGCAGCCTGCATGGCGTCGACCAGCCGCGGTCGAC
CCGCCGGGGTGCGGGCGGTGGGCCGCGGAAGCCGTCGTACCCGTTCGCCT
CCCTGCGCATGCCGCCGGGCTCGCGCAGCGAAGCGATTGCGGCGGCGGCC
CTGGCACGGGGCGTTGTGCTCGTGGTGCGGAATTCCTGCCAAGGGCCGGG
CAAAGAGGCCGCCGTGGCGGCCACGGCGGTGACAGCGGCACCAGCAGCAG
CGGTAGTAGAGGCTGCGGCAGCGGCGGGTGTTGCCACAGCGGCGGCTGCC
GGCGAGGCGGCGGCGACCCACTTGAACTCTACAGCTGCAGCTGGCGGTGG
CAGGCGCAATGATGGAGGCGGGAGCAGCCACGACGGCGGCGGTGGCGGCA
ACAACCGCGGCGGCGATGGCGCTGATCTCGGAGAGCAGGCCGCCCATCGT
GAGCCTGACACCTCTGCAATGGGTAGCGCGCCCACAGATTGCGAACCAAC
GAAGGCTGACTCGGCGGACGCGAAGTCGACGAAAGCACCTGCAGATTTGC
TGCCGCCGCAGCCGGAAACGGCATTGGAAGTTGACTGGGCCGCGGCCCGC
GACCTGAGTGCCACGGAGGCGCTGCTGGTCGAAAAGGCGTTCGGAGTTTA
CGGCGCGGACGCCAAGCGGATCGCCAGCATCCTGGCCGTCGTAACGGAGC
GCGATGTCGCAGCTCATCTGAGGCAGCAGATCGCGACCGCCGCAGCGGCT
GCCGCCGCCGACACCGACGCAGCGGTAACCAATGATGCGGATGGAAGCGG
CTTAGGCAGCAGGGCCATCCCGAGCGGCCGCCGCACTCCCTTCATGGCCG
ACGACTCGGCGTCGGAGCGCGCTCCCGTCACCAGTGGCGGCGGCAGCAGC
AAGAACGCAGAACGGCAGCGGATGAAGAATTGGCTGCGGGCGCAAAACAA
CATGCGGCGGCGTACACTGCAGGCGGAGCACCACCCGTGCGGCCATGCCG
GCGCCTGCGGCCCCGCGACGTGCCCCTGCGTGCAGGAGCACGGCGGCTGC
GACAAGTGGTGCGGCTGCCCGCAGGACTGCGCCCACCGCTTCGGCGGCTG
CCGCTGCAAGACCAGCGGTTGCCGCACCTGCGCCTGCCCGTGTTTCGCCG
CCGGCCGCGAGTGCGACTCGGACCTCTGCACGAGCTGCGGCGCCACCGTT
GGCCCGGCGGACGAGCCGCTCATGTGCGCGCACCTTGCCGCCGTCGCCGG
GGTTGCGGCCGGCGGTGTCCGCGTCGGCGGCGGTGGGAGTGGAAGCGGCG
GCGGCGGGGGCAGCGGCAGTGGGGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGTAGCAGTGGGGACGGCGGCGGCGGCGGCGGGAACGGCGGCGATGGCAG
AGCAGCAACTGCGGCGTCCGATGCCAAATGTGTGGGTGCAGCTGCATCTG
GCGCCCATGATGTCTGCTCTGGTAGACACGGCGGCGGCAGCAGCAGTGGT
GGCGGCAGCAGCGGCGGCAGCGGAAGCAGCAGTGGCGGTGGAGGTGGTGG
CAGCAGCAACGGCGGCGGTGGCAGCAGCAGCAACAGTGGCGGTGGCGGCG
GCGGCAGCAATGGCGGCGGCGGTGGCGGCAGCAGCGGCGGCGGCGGCGGC
GGCGGAGCAATGCCGCGGCCGTGCTGCAACACGAGCATGGGGCGCCGGCG
CCATAAGCGGCTGCTGATGGGGCGCAGCAGCATCCACGGCTGGGGTGCCT
TCACCGCCGAACCAATCGAGCGCAACGAATTCATCTACGAGTACACGGGC
GAGCTCATCAGCCAGGTGGGCAAGCAACGATGTGAAGGGTCTGTCTTTGT
TCCAACTGACTTTTCTACATATTTTGAGATTGGAGAAGCCATTGATAGAC
CTGCAAATTCAGAAAAGACGGCCTGTTTCCCCAATGCTGGCGTTTGCTTT
TTACACGAGTCTTCTATGCTAGTTAGAAGAAGCGCGCCCTGACTTTTCTG
TGTCCCGTCTCCTCCTATCCTTTCTCTCTCACATTCTCTTTCTTTCCGCC
GCCAGGACGAGGCGGACCGGCGCGGCAAGATGTACGACAAGCTGGACTGC
TCCTTCCTCTTCAATCTCAACGAGGACTGCGTCGTCGACGCCACGCGGAC
GGGCAGCAAGATCAAGTTCGCGAACCACCACGCTCAGCCCAACTGCTACG
CCAAGATTGTGCGGGTGGATGGCGGCCACCGCATCGGCATCTTCGCGAAG
CGGGACATTGCACACGGCGAAGAAATCACATTTGATTATGCCTACAGGTG
GGTTAGGGAGTGACGAGGACGATTTATTGGCCGGGCGGCGAACCTGCAGG
AGGAAACAATTTTGCACAAGGCGGGCCGGGCCGTTGTGTGCTTGCTCTTC
TGGGGGCTCTCAAATTCAGCACTGATATTGCCGTGTTACTTTTTGGCCTA
GAGGACCAGATCTCTTCCTTTTAAGGGATTTTCGGACCGTTTTCGCCTTG
GCGATTGAAAACCCGCCACCTTCTCTCGTGTTCCGGCAGCGAGGAGCACG
CGCCCGTCTGGCATGCTCCGGCGAAGCGGTCGGCGTGACGCGAACAAGTG
TGCCACCGGGCTCGAGCAGCTGGCACTTATTGACCGGAAGCCTGCGCAGG
CAATGCCTGGGTATCGCGCGGCTTTCTGCGGTGTAAGAACTGGGGATACG
TACACCATTTGTACAGATTCCAACAAGATGATATTTGCTTTTCGGCACAC
GTCGACTGAAGAGGGAACTGTGCGGGAGAAGCTGTTGTAATATTTCCAGC
AAATCACTCCCTT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig10:14786..17848+

>mRNA_P-wetherbeei_contig10.6.1 ID=mRNA_P-wetherbeei_contig10.6.1|Name=mRNA_P-wetherbeei_contig10.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig10:14786..17848+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCGGCCGTGCTGCAACACGAGCATGGGGCGCCGGCGCCATAAGCG
GCTGCTGATGGGGCGCAGCAGCATCCACGGCTGGGGTGCCTTCACCGCCG
AACCAATCGAGCGCAACGAATTCATCTACGAGTACACGGGCGAGCTCATC
AGCCAGGACGAGGCGGACCGGCGCGGCAAGATGTACGACAAGCTGGACTG
CTCCTTCCTCTTCAATCTCAACGAGGACTGCGTCGTCGACGCCACGCGGA
CGGGCAGCAAGATCAAGTTCGCGAACCACCACGCTCAGCCCAACTGCTAC
GCCAAGATTGTGCGGGTGGATGGCGGCCACCGCATCGGCATCTTCGCGAA
GCGGGACATTGCACACGGCGAAGAAATCACATTTGATTATGCCTACAGCG
AGGAGCACGCGCCCGTCTGGCATGCTCCGGCGAAGCGGTCGGCGTGA
back to top