mRNA_P-wetherbeei_contig10.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10.5.1
Unique NamemRNA_P-wetherbeei_contig10.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: A0A0P1AJ68_PLAHL (Transcriptional repressor EZH1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ68_PLAHL)

HSP 1 Score: 94.7 bits (234), Expect = 1.560e-16
Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 2 
Query: 1397 NNMRRRTLQAEHHPCGHAGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGAT 1648
            N ++ + +  E+ PC H G C P  C C+     CDK C C +DC +RF GCRC    CRT ACPCF A REC+ DLCT+CGA+
Sbjct: 1114 NRLKSKGVNHEYEPCNHKGVCDPTYCSCMTRDHTCDKACSCSRDCPNRFPGCRCSLGNCRTKACPCFIAARECNPDLCTTCGAS 1197
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: A0A662WSZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSZ4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.010e-15
Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = 2 
Query: 1403 MRRRTLQAEHHPCGHAGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGAT 1648
            M+ R    E+ PC H G+C  A C C++    C+K CGC +DC++RF GC C+   CRT ACPC+ A RECD D+C SCGA+
Sbjct:  832 MKDRGANHEYVPCNHVGSCDSAQCSCMRRDHYCEKSCGCSRDCSNRFPGCHCEAGQCRTSACPCYFAARECDPDVCVSCGAS 913
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: A0A6G0N597_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6G0N597_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.500e-15
Identity = 42/84 (50.00%), Postives = 52/84 (61.90%), Query Frame = 2 
Query: 1397 NNMRRRTLQAEHHPCGHAGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGAT 1648
            N ++ +    E+ PC H GAC  A C C+     CDK C C +DC +RF GCRC    CRT ACPCF A REC+ DLC +CGA+
Sbjct: 1158 NRLKDKGANHEYEPCNHEGACDRAGCTCMTRDHTCDKACSCSRDCPNRFPGCRCSLGNCRTKACPCFVAARECNPDLCVTCGAS 1241
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: A0A329SLM2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SLM2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.950e-15
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 2 
Query: 1397 NNMRRRTLQAEHHPCGHAGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGAT 1648
            N ++ +    E+ PC H GAC    C C+     CDK C C +DC +RF GC+C    CRT ACPCF A REC+ DLCT+CGA+
Sbjct: 1140 NRLKDKGANHEYEPCNHEGACDSTDCSCMTRDHTCDKACSCSRDCPNRFPGCKCSLGNCRTKACPCFIAARECNPDLCTTCGAS 1223
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: F0WTA9_9STRA (Polycomblike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WTA9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.250e-15
Identity = 41/74 (55.41%), Postives = 50/74 (67.57%), Query Frame = 2 
Query: 1427 EHHPCGHAGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGAT 1648
            E+ PCGH+G+C   TC C+     C+K C C ++C +RF GCRC    CRT ACPCFAA REC  DLC +CGAT
Sbjct:  773 EYEPCGHSGSCTAETCSCLNRGHTCEKACSCSKNCPNRFQGCRCSLGNCRTKACPCFAAARECLPDLCFTCGAT 846
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: D0NJ77_PHYIT (Polycomb-like protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJ77_PHYIT)

HSP 1 Score: 90.5 bits (223), Expect = 3.400e-15
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 2 
Query: 1397 NNMRRRTLQAEHHPCGHAGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGAT 1648
            N ++ +    E+ PC H GAC    C C+     CDK C C +DC +RF GC+C    CRT ACPCF A REC+ DLCT+CGA+
Sbjct: 1127 NRLKDKGANHEYEPCNHEGACDSNDCSCMTRDHTCDKACSCSRDCPNRFPGCKCSLGNCRTKACPCFIAARECNPDLCTTCGAS 1210
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: G4Z0T2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z0T2_PHYSP)

HSP 1 Score: 90.5 bits (223), Expect = 3.430e-15
Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 2 
Query: 1397 NNMRRRTLQAEHHPCGHAGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGAT 1648
            N ++ +    E+ PC H GAC    C C+     CDK C C +DC +RF GCRC    CRT ACPCF A REC+ DLC +CGA+
Sbjct: 1157 NRLKDKGANHEYEPCNHEGACDTTGCSCMTRDHTCDKACSCSRDCPNRFPGCRCSLGNCRTKACPCFVAARECNPDLCVTCGAS 1240
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: A0A7S3U905_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3U905_9CHLO)

HSP 1 Score: 88.2 bits (217), Expect = 1.310e-14
Identity = 42/76 (55.26%), Postives = 48/76 (63.16%), Query Frame = 2 
Query: 1412 RTLQAEHHPCGHAGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSC 1639
            R +   + PC  +G C   TC C Q    C+K+C C Q C HRF GCRCK   CRT ACPCFAAGRECD DLC +C
Sbjct:  497 RAVLPAYKPCSCSGNCVFDTCTCAQNGNFCEKFCQCSQSCPHRFQGCRCKKGQCRTKACPCFAAGRECDPDLCHNC 572
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: G4Z4T5_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z4T5_PHYSP)

HSP 1 Score: 88.2 bits (217), Expect = 1.520e-14
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 2 
Query: 1403 MRRRTLQAEHHPCGH-AGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGA 1645
            M+ R    E+ PC H  G+C  A C C++    C+K CGC  DC++RF GC C+   CRT ACPC+ A RECD D+CTSCGA
Sbjct:  649 MKDRGANHEYVPCNHDGGSCDSAQCSCMRRDHYCEKACGCSPDCSNRFPGCHCEVGQCRTSACPCYFASRECDPDVCTSCGA 730
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BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Match: A0A024G2I9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2I9_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.700e-14
Identity = 44/86 (51.16%), Postives = 53/86 (61.63%), Query Frame = 2 
Query: 1403 MRRRTLQAE----HHPCGHAGACGPATCPCVQEHGGCDKWCGCPQDCAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGAT 1648
            +R RTL+ E    + PC H+G C    C C+     C+K C C +DC +RF GCRC    CRT ACPCFAA REC  DLC +CGAT
Sbjct:  696 LRGRTLRTEQELEYEPCEHSGLCTVENCSCLNRGHTCEKACSCSKDCPNRFQGCRCSFGNCRTKACPCFAAARECLPDLCFTCGAT 781
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P1AJ68_PLAHL1.560e-1650.00Transcriptional repressor EZH1 n=1 Tax=Plasmopara ... [more]
A0A662WSZ4_9STRA1.010e-1550.00Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A6G0N597_9STRA1.500e-1550.00Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A329SLM2_9STRA1.950e-1548.81Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
F0WTA9_9STRA2.250e-1555.41Polycomblike protein putative n=1 Tax=Albugo laiba... [more]
D0NJ77_PHYIT3.400e-1548.81Polycomb-like protein n=1 Tax=Phytophthora infesta... [more]
G4Z0T2_PHYSP3.430e-1548.81Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A7S3U905_9CHLO1.310e-1455.26Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
G4Z4T5_PHYSP1.520e-1451.22Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A024G2I9_9STRA2.700e-1451.16Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10contigP-wetherbeei_contig10:14585..16235 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog653948.CCA24598
PFAMsSET
Model size1651
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11430,ko:K17451
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko05206,map00310,map05206
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.49e-16
EggNOG OGsCOG2940@1|root,KOG1079@2759|Eukaryota
EC2.1.1.43
Descriptionhistone-lysine N-methyltransferase activity
Cds size1623
COG categoryG
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185848.4151967-UTR-P-wetherbeei_contig10:14584..146121683185848.4151967-UTR-P-wetherbeei_contig10:14584..14612Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10 14585..14612 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185848.4280531-CDS-P-wetherbeei_contig10:14612..162351683185848.4280531-CDS-P-wetherbeei_contig10:14612..16235Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10 14613..16235 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10.5.1prot_P-wetherbeei_contig10.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10 14613..16235 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10.5.1

>prot_P-wetherbeei_contig10.5.1 ID=prot_P-wetherbeei_contig10.5.1|Name=mRNA_P-wetherbeei_contig10.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=541bp
MVGTVAAQPAVLPKEAARALSNVLGVSVAQVQRTWTALALRKDAAAAVVE
GRKGGGNSSDNGGAATSSRSAPMPLSGGGVRISNISGSAAAAATAGSDSG
VAPKPPSLCSWQRWGEESLGLRGETTCQTVGESFELLFCRRCYTYDCSLH
GVDQPRSTRRGAGGGPRKPSYPFASLRMPPGSRSEAIAAAALARGVVLVV
RNSCQGPGKEAAVAATAVTAAPAAAVVEAAAAAGVATAAAAGEAAATHLN
STAAAGGGRRNDGGGSSHDGGGGGNNRGGDGADLGEQAAHREPDTSAMGS
APTDCEPTKADSADAKSTKAPADLLPPQPETALEVDWAAARDLSATEALL
VEKAFGVYGADAKRIASILAVVTERDVAAHLRQQIATAAAAAAADTDAAV
TNDADGSGLGSRAIPSGRRTPFMADDSASERAPVTSGGGSSKNAERQRMK
NWLRAQNNMRRRTLQAEHHPCGHAGACGPATCPCVQEHGGCDKWCGCPQD
CAHRFGGCRCKTSGCRTCACPCFAAGRECDSDLCTSCGATV
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mRNA from alignment at P-wetherbeei_contig10:14585..16235+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10.5.1 ID=mRNA_P-wetherbeei_contig10.5.1|Name=mRNA_P-wetherbeei_contig10.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1651bp|location=Sequence derived from alignment at P-wetherbeei_contig10:14585..16235+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCGGCGGCGGGAGCGGCAGCAAGGGGATGGTGGGAACGGTCGCAGCGC
AGCCGGCTGTTCTGCCGAAGGAAGCTGCACGTGCTCTTTCAAACGTGCTA
GGAGTGAGCGTTGCGCAAGTGCAACGCACCTGGACTGCGCTGGCTCTCCG
CAAGGACGCTGCGGCCGCCGTTGTCGAAGGGCGAAAAGGCGGTGGGAACA
GCAGCGACAATGGCGGCGCCGCCACCAGCAGCCGGAGTGCTCCCATGCCG
CTGTCAGGCGGCGGTGTGAGGATCAGCAACATCAGCGGCTCCGCCGCTGC
TGCCGCCACCGCCGGCAGCGATAGCGGAGTAGCTCCGAAACCGCCGTCTC
TCTGTTCGTGGCAACGCTGGGGCGAGGAGAGCCTGGGGCTGCGCGGTGAA
ACGACGTGCCAGACGGTCGGTGAGAGCTTCGAGCTACTTTTTTGCCGCCG
CTGCTACACGTACGACTGCAGCCTGCATGGCGTCGACCAGCCGCGGTCGA
CCCGCCGGGGTGCGGGCGGTGGGCCGCGGAAGCCGTCGTACCCGTTCGCC
TCCCTGCGCATGCCGCCGGGCTCGCGCAGCGAAGCGATTGCGGCGGCGGC
CCTGGCACGGGGCGTTGTGCTCGTGGTGCGGAATTCCTGCCAAGGGCCGG
GCAAAGAGGCCGCCGTGGCGGCCACGGCGGTGACAGCGGCACCAGCAGCA
GCGGTAGTAGAGGCTGCGGCAGCGGCGGGTGTTGCCACAGCGGCGGCTGC
CGGCGAGGCGGCGGCGACCCACTTGAACTCTACAGCTGCAGCTGGCGGTG
GCAGGCGCAATGATGGAGGCGGGAGCAGCCACGACGGCGGCGGTGGCGGC
AACAACCGCGGCGGCGATGGCGCTGATCTCGGAGAGCAGGCCGCCCATCG
TGAGCCTGACACCTCTGCAATGGGTAGCGCGCCCACAGATTGCGAACCAA
CGAAGGCTGACTCGGCGGACGCGAAGTCGACGAAAGCACCTGCAGATTTG
CTGCCGCCGCAGCCGGAAACGGCATTGGAAGTTGACTGGGCCGCGGCCCG
CGACCTGAGTGCCACGGAGGCGCTGCTGGTCGAAAAGGCGTTCGGAGTTT
ACGGCGCGGACGCCAAGCGGATCGCCAGCATCCTGGCCGTCGTAACGGAG
CGCGATGTCGCAGCTCATCTGAGGCAGCAGATCGCGACCGCCGCAGCGGC
TGCCGCCGCCGACACCGACGCAGCGGTAACCAATGATGCGGATGGAAGCG
GCTTAGGCAGCAGGGCCATCCCGAGCGGCCGCCGCACTCCCTTCATGGCC
GACGACTCGGCGTCGGAGCGCGCTCCCGTCACCAGTGGCGGCGGCAGCAG
CAAGAACGCAGAACGGCAGCGGATGAAGAATTGGCTGCGGGCGCAAAACA
ACATGCGGCGGCGTACACTGCAGGCGGAGCACCACCCGTGCGGCCATGCC
GGCGCCTGCGGCCCCGCGACGTGCCCCTGCGTGCAGGAGCACGGCGGCTG
CGACAAGTGGTGCGGCTGCCCGCAGGACTGCGCCCACCGCTTCGGCGGCT
GCCGCTGCAAGACCAGCGGTTGCCGCACCTGCGCCTGCCCGTGTTTCGCC
GCCGGCCGCGAGTGCGACTCGGACCTCTGCACGAGCTGCGGCGCCACCGT
T
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10:14585..16235+

>mRNA_P-wetherbeei_contig10.5.1 ID=mRNA_P-wetherbeei_contig10.5.1|Name=mRNA_P-wetherbeei_contig10.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1623bp|location=Sequence derived from alignment at P-wetherbeei_contig10:14585..16235+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGGAACGGTCGCAGCGCAGCCGGCTGTTCTGCCGAAGGAAGCTGC
ACGTGCTCTTTCAAACGTGCTAGGAGTGAGCGTTGCGCAAGTGCAACGCA
CCTGGACTGCGCTGGCTCTCCGCAAGGACGCTGCGGCCGCCGTTGTCGAA
GGGCGAAAAGGCGGTGGGAACAGCAGCGACAATGGCGGCGCCGCCACCAG
CAGCCGGAGTGCTCCCATGCCGCTGTCAGGCGGCGGTGTGAGGATCAGCA
ACATCAGCGGCTCCGCCGCTGCTGCCGCCACCGCCGGCAGCGATAGCGGA
GTAGCTCCGAAACCGCCGTCTCTCTGTTCGTGGCAACGCTGGGGCGAGGA
GAGCCTGGGGCTGCGCGGTGAAACGACGTGCCAGACGGTCGGTGAGAGCT
TCGAGCTACTTTTTTGCCGCCGCTGCTACACGTACGACTGCAGCCTGCAT
GGCGTCGACCAGCCGCGGTCGACCCGCCGGGGTGCGGGCGGTGGGCCGCG
GAAGCCGTCGTACCCGTTCGCCTCCCTGCGCATGCCGCCGGGCTCGCGCA
GCGAAGCGATTGCGGCGGCGGCCCTGGCACGGGGCGTTGTGCTCGTGGTG
CGGAATTCCTGCCAAGGGCCGGGCAAAGAGGCCGCCGTGGCGGCCACGGC
GGTGACAGCGGCACCAGCAGCAGCGGTAGTAGAGGCTGCGGCAGCGGCGG
GTGTTGCCACAGCGGCGGCTGCCGGCGAGGCGGCGGCGACCCACTTGAAC
TCTACAGCTGCAGCTGGCGGTGGCAGGCGCAATGATGGAGGCGGGAGCAG
CCACGACGGCGGCGGTGGCGGCAACAACCGCGGCGGCGATGGCGCTGATC
TCGGAGAGCAGGCCGCCCATCGTGAGCCTGACACCTCTGCAATGGGTAGC
GCGCCCACAGATTGCGAACCAACGAAGGCTGACTCGGCGGACGCGAAGTC
GACGAAAGCACCTGCAGATTTGCTGCCGCCGCAGCCGGAAACGGCATTGG
AAGTTGACTGGGCCGCGGCCCGCGACCTGAGTGCCACGGAGGCGCTGCTG
GTCGAAAAGGCGTTCGGAGTTTACGGCGCGGACGCCAAGCGGATCGCCAG
CATCCTGGCCGTCGTAACGGAGCGCGATGTCGCAGCTCATCTGAGGCAGC
AGATCGCGACCGCCGCAGCGGCTGCCGCCGCCGACACCGACGCAGCGGTA
ACCAATGATGCGGATGGAAGCGGCTTAGGCAGCAGGGCCATCCCGAGCGG
CCGCCGCACTCCCTTCATGGCCGACGACTCGGCGTCGGAGCGCGCTCCCG
TCACCAGTGGCGGCGGCAGCAGCAAGAACGCAGAACGGCAGCGGATGAAG
AATTGGCTGCGGGCGCAAAACAACATGCGGCGGCGTACACTGCAGGCGGA
GCACCACCCGTGCGGCCATGCCGGCGCCTGCGGCCCCGCGACGTGCCCCT
GCGTGCAGGAGCACGGCGGCTGCGACAAGTGGTGCGGCTGCCCGCAGGAC
TGCGCCCACCGCTTCGGCGGCTGCCGCTGCAAGACCAGCGGTTGCCGCAC
CTGCGCCTGCCCGTGTTTCGCCGCCGGCCGCGAGTGCGACTCGGACCTCT
GCACGAGCTGCGGCGCCACCGTT
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