mRNA_P-wetherbeei_contig1.13.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1.13.1
Unique NamemRNA_P-wetherbeei_contig1.13.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A7U3S048_9STRA (Cytochrome c oxidase subunit 3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3S048_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 1.560e-137
Identity = 192/267 (71.91%), Postives = 225/267 (84.27%), Query Frame = 3
Query:  489 SISSILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289
            S S+ ++QRHPFHLV+PSPWP +AA+ +  LT G V+YMHNY  GG LLLLG   ++ VM  WWRD+IREAT+EGHHT AVQ GLR+GMILFIVSE+MFFFA     FHSSL+P F+IGGVWPP GIE+ISPW VPLLNT++LLSSGATVTWAHH++V+G++EQA LAL  TL LA  FT LQA+EYL+APFGMSD VYG++FYMATGFHGFHV+IGT+FL V   RL S HF+R+HHFGFEAAAWYWHFVDVVWLFLF+TIYWWG 
Sbjct:    3 SKSAKISQRHPFHLVDPSPWPLVAAMGALSLTFGAVMYMHNYRGGGQLLLLGLLTILFVMYTWWRDIIREATFEGHHTGAVQGGLRMGMILFIVSEVMFFFAXXXXXFHSSLAPAFSIGGVWPPAGIEIISPWGVPLLNTILLLSSGATVTWAHHAIVAGAREQALLALGGTLVLALFFTGLQAFEYLHAPFGMSDSVYGASFYMATGFHGFHVIIGTLFLFVCTLRLFSHHFSRQHHFGFEAAAWYWHFVDVVWLFLFITIYWWGS 269          
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A2R4QQ89_9PHAE (Cytochrome c oxidase subunit 3 n=8 Tax=Fucales TaxID=3009 RepID=A0A2R4QQ89_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 1.980e-136
Identity = 191/263 (72.62%), Postives = 218/263 (82.89%), Query Frame = 3
Query:  498 SILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 1286
            S L QRHPFHLV+PSPWPF+AAL    LT GGVLYMHNY+ GG LL+LG   ++ VM  WWRD+IREA +EG HT AVQ GLR+GMILFIVSE+MFFFAFFWAFF SSL+PVFNIGGVWPP GIE ISPW +PLLNT+ILLSSGA+VTWAHH++V+GSK++A   L  T   A  FT LQ +EY++APF MSD VYGS F+MATGFHGFHV+IGTIFL +   RL  DHF+R+ HFGFEAAAWYWHFVDVVWLFLFLTIYWWG
Sbjct:    5 SKLIQRHPFHLVDPSPWPFVAALGGLSLTFGGVLYMHNYSGGGQLLILGVLTILYVMFTWWRDIIREALFEGQHTLAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPSGIEAISPWGLPLLNTIILLSSGASVTWAHHAIVAGSKKEALYGLAVTTIFAVIFTCLQGFEYISAPFSMSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYLDHFSRQRHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 267          
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A0U1V199_SARFS (Cytochrome c oxidase subunit 3 n=199 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1V199_SARFS)

HSP 1 Score: 406 bits (1044), Expect = 3.970e-136
Identity = 192/259 (74.13%), Postives = 214/259 (82.63%), Query Frame = 3
Query:  510 QRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 1286
            QRHPFHLV+PSPWPF+AAL     T GGVLYMHNY  GG LL LG   ++ VM  WWRDVIREA++EG HT AVQ GLR+GMILFIVSE+MFFFAFFWAFF SSLSPVFNIGGVWPP GIE ISPW +PLLNT+ILLSSGA+VTW+HH++V G K +A L L  T+  A  FTALQ +EY+NAPF MSD VYGS F+MATGFHGFHV+IGTIFL V   RL  DHF+R+ HFGFEAAAWYWHFVDVVWLFLFLTIYWWG
Sbjct:    9 QRHPFHLVDPSPWPFVAALGGLSSTFGGVLYMHNYDGGGQLLCLGLITILYVMFTWWRDVIREASFEGQHTAAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPAGIEAISPWGLPLLNTIILLSSGASVTWSHHAIVGGFKREALLGLVITILFAVIFTALQGFEYVNAPFAMSDSVYGSVFFMATGFHGFHVIIGTIFLCVCTFRLYLDHFSRQRHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 267          
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A4D6C7H3_9CHLO (Cytochrome c oxidase subunit 3 n=1 Tax=Chloropicon maureeniae TaxID=1461542 RepID=A0A4D6C7H3_9CHLO)

HSP 1 Score: 405 bits (1040), Expect = 1.290e-135
Identity = 185/260 (71.15%), Postives = 214/260 (82.31%), Query Frame = 3
Query:  510 QRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289
            Q+HPFHLV+PSPWP L A+A++  T GGV+YMH+Y  GG +L  GF  ++  M  WWRDV++EAT+EGHHT+AVQ GLR GMILFIVSEIMFFFAFFWAFFHSSLSP  +IG +WPPKGIEV+SPWEVP LNTVILLSSGA VTWAHH++V+G K+QA   L  T+ LA  FT  Q  EY+ APF MSD VYGSTF++ATGFHGFHV IGT+FL V   RLM++HFT  HHFGFEAAAWYWHFVDVVWLFLF+TIYWWGG
Sbjct:    6 QKHPFHLVDPSPWPLLGAIAAWTTTTGGVMYMHDYQGGGMMLTFGFITLLYTMFVWWRDVVQEATYEGHHTQAVQLGLRWGMILFIVSEIMFFFAFFWAFFHSSLSPSIDIGAIWPPKGIEVLSPWEVPFLNTVILLSSGAAVTWAHHAIVAGEKQQAFYGLIVTVLLAILFTGFQVLEYIEAPFSMSDSVYGSTFFLATGFHGFHVFIGTLFLIVCTFRLMANHFTPNHHFGFEAAAWYWHFVDVVWLFLFVTIYWWGG 265          
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: C1KRA3_MICPC (Cytochrome c oxidase subunit 3 n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1KRA3_MICPC)

HSP 1 Score: 404 bits (1038), Expect = 2.580e-135
Identity = 180/261 (68.97%), Postives = 216/261 (82.76%), Query Frame = 3
Query:  510 QRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGGA 1292
            Q+HPFHLV+PSPWP  A+L++FC TVGGV+YMH Y  GG L  LGF  +   M  WWRDVIREAT+EGHHT  VQTGL+ GM+LFIVSEIMFFFAFFWAFFHS+L+P   IG +WPPKGIEV++PWE+P LNTVILL+SGATVTWAHH+++ G K++  ++L  T+ LA  FT  QA EY+ APF ++DGVYGSTFY+ATGFHGFHV +GT+FL++ L R + DHFT+ HHFGFEAAAWYWHFVDVVWLFLF+ IYWWGGA
Sbjct:    6 QKHPFHLVDPSPWPMFASLSAFCTTVGGVMYMHGYNGGGLLASLGFGMVCYTMVVWWRDVIREATFEGHHTSTVQTGLKYGMLLFIVSEIMFFFAFFWAFFHSALAPTIEIGAMWPPKGIEVLNPWEIPFLNTVILLTSGATVTWAHHAILGGKKQEVIVSLLFTIALASVFTGFQAMEYVEAPFTITDGVYGSTFYLATGFHGFHVFVGTVFLSICLVRTLKDHFTKAHHFGFEAAAWYWHFVDVVWLFLFVAIYWWGGA 266          
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A140F2P5_9STRA (Cytochrome c oxidase subunit 3 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140F2P5_9STRA)

HSP 1 Score: 404 bits (1037), Expect = 4.220e-135
Identity = 187/262 (71.37%), Postives = 219/262 (83.59%), Query Frame = 3
Query:  507 TQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGGA 1292
            TQ+HPFH+V+PSPWP +AA ++  LT GGVLYMHNY+ GG+LLLLGF  ++ VM  WWRDVIREAT+EGHHT+AVQTGLR+G+ILFIVSE+MFF AFFWAFFHSSL+PV  IGGVWPPK IEV+SPW +P LNTVILL+SGATVTWAH +++   +E A  +L  T+  A  FT+ Q YEYL+A F MSDG+YG+ FYMATGFHGFHV IGT FL V L RL   HFTREHHFGFEAAAWYWHFVDVVWLFLF++IYWWGG+
Sbjct:    9 TQKHPFHIVDPSPWPLVAAFSAMGLTTGGVLYMHNYSGGGSLLLLGFLFLLLVMFGWWRDVIREATFEGHHTKAVQTGLRMGVILFIVSEVMFFVAFFWAFFHSSLAPVPEIGGVWPPKAIEVMSPWGIPFLNTVILLTSGATVTWAHEAIIHNRREDAISSLIYTVLYAIYFTSFQVYEYLHAGFAMSDGIYGTVFYMATGFHGFHVFIGTCFLTVCLIRLYKYHFTREHHFGFEAAAWYWHFVDVVWLFLFVSIYWWGGS 270          
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A649UDE3_AURAN (Cytochrome c oxidase subunit 3 n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A649UDE3_AURAN)

HSP 1 Score: 403 bits (1036), Expect = 6.190e-135
Identity = 184/271 (67.90%), Postives = 222/271 (81.92%), Query Frame = 3
Query:  477 MSNSSISSILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289
            M+ S+I     Q+HPFHLV+PSPWP +A++ + C+T GGV+YMHNY+ GG L L G    I VM  WW+D++RE T+EG HT+ VQ GLR GMILFIVSE+MFFFAFFWAFFHSSLSP F+IGGVWPP+GIEV++PWEVPLLNTV+LLSSGATVTWAHH++V+GS++ A + L  T+ LA  FT  QA EY  +PF +SD VYG+TF++ATGFHGFHV+IGTIFL +   RL+  HFTREHHFGFEAAAWYWHFVDVVWLFLF+TIYWWG 
Sbjct:    1 MNVSTIEYKNNQKHPFHLVDPSPWPLVASIGALCMTFGGVMYMHNYSGGGTLFLTGLSTTIFVMYTWWKDIVREGTYEGQHTKEVQQGLRSGMILFIVSEVMFFFAFFWAFFHSSLSPTFDIGGVWPPEGIEVLNPWEVPLLNTVLLLSSGATVTWAHHAIVAGSRKDAFIGLVLTVILAVIFTGFQALEYYTSPFTISDSVYGATFFLATGFHGFHVIIGTIFLTICTIRLIYHHFTREHHFGFEAAAWYWHFVDVVWLFLFVTIYWWGS 271          
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: Q2TUF2_9PHAE (Cytochrome c oxidase subunit 3 n=14 Tax=Phaeophyceae TaxID=2870 RepID=Q2TUF2_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 9.080e-135
Identity = 188/261 (72.03%), Postives = 215/261 (82.38%), Query Frame = 3
Query:  504 LTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 1286
            + QRHPFHLV+PSPWP +AAL   CLT GGVL+MHNY  GG LL LG   ++ VM  WWRD+IREA +EG HT AVQ GLR+GMILFIVSE+MFFFAFFWAFF SS+SPVFNIGGVWPP GIE ISPW +P LNT++LLSSGA+VTWAHH++V G K++A   L  TL  A  FTALQ +EY++APF MSDGVYGS FYMATGFHGFHV+IGTIFLA+   RL   HF+R+ HFGFEAAAWYWHFVDVVWLFLF+TIYWWG
Sbjct:    7 MIQRHPFHLVDPSPWPLVAALGGLCLTFGGVLFMHNYNGGGQLLSLGVITILYVMFTWWRDIIREAAFEGQHTLAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSISPVFNIGGVWPPIGIEAISPWGLPFLNTILLLSSGASVTWAHHAIVGGFKKEALQGLGVTLAFAVAFTALQGFEYMHAPFAMSDGVYGSVFYMATGFHGFHVIIGTIFLAICTLRLYFHHFSRQRHFGFEAAAWYWHFVDVVWLFLFITIYWWG 267          
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A4Y5T8S8_9PHAE (Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotaceae TaxID=2874 RepID=A0A4Y5T8S8_9PHAE)

HSP 1 Score: 402 bits (1032), Expect = 2.230e-134
Identity = 183/262 (69.85%), Postives = 218/262 (83.21%), Query Frame = 3
Query:  504 LTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289
            ++ RHPFHLV+PSPWP +A++ +  LT GGV++MHNY+ GG LL LG   ++ VM  WWRD+IREA++EGHHT +VQ GLR+GMILFIVSE+MFFFAFFWAFF SSLSPVFNIGGVWPP G++VISPW +PLLNTV+LLSSGATVTWAHH++V G K +A+ AL+ TL  A  FT  Q  EY+ APF +SD VYGSTF+MATGFHGFHV+IGTIFL++   RL  DHF+R+HHFGFEAAAWYWHFVDVVWL LFL IYWWG 
Sbjct:    7 VSHRHPFHLVDPSPWPIVASIGALSLTFGGVMFMHNYSGGGQLLSLGVLTILYVMGIWWRDIIREASFEGHHTSSVQDGLRLGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPSGLDVISPWGLPLLNTVLLLSSGATVTWAHHAIVGGLKYEAQSALYVTLTFAIYFTVFQILEYVEAPFSISDSVYGSTFFMATGFHGFHVIIGTIFLSICAVRLYVDHFSRQHHFGFEAAAWYWHFVDVVWLILFLGIYWWGA 268          
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A4D6C5B1_9CHLO (Cytochrome c oxidase subunit 3 n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A4D6C5B1_9CHLO)

HSP 1 Score: 398 bits (1023), Expect = 4.920e-133
Identity = 184/266 (69.17%), Postives = 215/266 (80.83%), Query Frame = 3
Query:  492 ISSILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289
            +SS   QRHPFHLV+PSPWP  ++L +   T G VL+MH Y  GG +  LGF G++  M  WWRDV++EAT+EGHHT AVQTGLR GMILFIVSEIMFFFAFFWAFFHSS+SP  +IGG+WPPKGIEV+SPWEVPLLNT+ILL SGA+VTWAHH ++ G K+Q   +L  T+ LA  FT LQ  EY+ APF +SDGVYG TF++ATGFHGFHVLIGTIFL V L R ++ HFT  HHFGFEAAAWYWHFVDVVWLFLF++IYWWGG
Sbjct:    1 MSSSAIQRHPFHLVDPSPWPIFSSLCALTTTTGAVLWMHGYENGGFVFSLGFAGILYAMIVWWRDVVKEATYEGHHTHAVQTGLRWGMILFIVSEIMFFFAFFWAFFHSSVSPAIDIGGIWPPKGIEVLSPWEVPLLNTLILLLSGASVTWAHHGILCGEKKQIVYSLIVTVILAAIFTGLQGLEYVEAPFSISDGVYGCTFFLATGFHGFHVLIGTIFLTVCLFRQLAGHFTPSHHFGFEAAAWYWHFVDVVWLFLFVSIYWWGG 266          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7U3S048_9STRA1.560e-13771.91Cytochrome c oxidase subunit 3 n=1 Tax=Schizocladi... [more]
A0A2R4QQ89_9PHAE1.980e-13672.62Cytochrome c oxidase subunit 3 n=8 Tax=Fucales Tax... [more]
A0A0U1V199_SARFS3.970e-13674.13Cytochrome c oxidase subunit 3 n=199 Tax=Sargassac... [more]
A0A4D6C7H3_9CHLO1.290e-13571.15Cytochrome c oxidase subunit 3 n=1 Tax=Chloropicon... [more]
C1KRA3_MICPC2.580e-13568.97Cytochrome c oxidase subunit 3 n=1 Tax=Micromonas ... [more]
A0A140F2P5_9STRA4.220e-13571.37Cytochrome c oxidase subunit 3 n=1 Tax=Trachydiscu... [more]
A0A649UDE3_AURAN6.190e-13567.90Cytochrome c oxidase subunit 3 n=2 Tax=Pelagomonad... [more]
Q2TUF2_9PHAE9.080e-13572.03Cytochrome c oxidase subunit 3 n=14 Tax=Phaeophyce... [more]
A0A4Y5T8S8_9PHAE2.230e-13469.85Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotace... [more]
A0A4D6C5B1_9CHLO4.920e-13369.17Cytochrome c oxidase subunit 3 n=1 Tax=Chloropicon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1contigP-wetherbeei_contig1:28905..30701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog70448.Q0P3F8
PFAMsCOX3
Model size1797
Max annot lvl3041|Chlorophyta
KEGG koko:K02262
KEGG TC3.D.4.11,3.D.4.7,3.D.4.8
KEGG Pathwayko00190,ko01100,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00154
Hectar predicted targeting categorysignal anchor
Exons1
Evalue1.81e-131
EggNOG OGsCOG1845@1|root,KOG4664@2759|Eukaryota,37QER@33090|Viridiplantae,34MM4@3041|Chlorophyta
DescriptionSubunits I, II and III form the functional core of the enzyme complex
Cds size834
COG categoryC
BRITEko00000,ko00001,ko00002,ko03029
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185848.2169523-UTR-P-wetherbeei_contig1:28904..293651683185848.2169523-UTR-P-wetherbeei_contig1:28904..29365Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1 28905..29365 +
1683185848.2357259-UTR-P-wetherbeei_contig1:30199..307011683185848.2357259-UTR-P-wetherbeei_contig1:30199..30701Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1 30200..30701 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185848.2272084-CDS-P-wetherbeei_contig1:29365..301991683185848.2272084-CDS-P-wetherbeei_contig1:29365..30199Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1 29366..30199 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1.13.1prot_P-wetherbeei_contig1.13.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1 29366..30199 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1.13.1

>prot_P-wetherbeei_contig1.13.1 ID=prot_P-wetherbeei_contig1.13.1|Name=mRNA_P-wetherbeei_contig1.13.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp
MDLQIMSNSSISSILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHN
YALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMIL
FIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTV
ILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAP
FGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGF
EAAAWYWHFVDVVWLFLFLTIYWWGGA*
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mRNA from alignment at P-wetherbeei_contig1:28905..30701+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1.13.1 ID=mRNA_P-wetherbeei_contig1.13.1|Name=mRNA_P-wetherbeei_contig1.13.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1797bp|location=Sequence derived from alignment at P-wetherbeei_contig1:28905..30701+ (Phaeothamnion wetherbeei SAG_119_79)
ATACGATCTAATTGTATTTTCGTACGCGGATTATTACAAATATATGGAAT TGGAAATTTTCAAATTAAAAAATTATACGCGCAATTCGGTTTTCAAAAAG ATCTTCGAACAGAGGATTTAACACAGATTCAATGGGCCGAATTACAAGAA TGGGCCAAATTGAATTGGCCTGTCCTTGAAATGGAATTAAAACGATTTAA ACAGCAACGAATTAATAGATTAATTCTGGTAAGAGCATACCGTGGAATTC GCCATAAACAAGGATTACCTGTTCGAGGTCAAAGAAGTCATACCAATGCG CGGACTCAAAAACGAGGAAAATCTAAACGCCGTAAATAAAATAAGGGTAT TTTAAAATTTATAGAAAAATATAATGGAGCAAAAATTAAAAACTTTTAGG TTGATGGTTAACCTCCTCCCTAAAAGTTTACAAATGTTTGTTAATAGGTT AATAACATAACATGGATTTACAGATTATGTCTAATTCTTCAATTTCTTCT ATCTTAACACAACGCCATCCTTTTCATTTGGTAGAACCCAGCCCATGGCC TTTTTTGGCGGCTTTAGCGTCGTTTTGCCTAACAGTAGGGGGGGTCCTTT ATATGCATAATTATGCTTTAGGTGGAAATTTATTATTGTTAGGTTTTTTT GGAATGATAGCTGTAATGGCCTTTTGGTGGCGTGATGTAATTCGTGAAGC GACTTGGGAAGGACATCATACGGAAGCAGTACAAACTGGTTTACGTATAG GAATGATATTATTTATTGTGTCAGAAATAATGTTTTTCTTTGCATTCTTT TGGGCTTTTTTTCATTCTAGCTTATCGCCTGTTTTCAATATAGGTGGTGT TTGGCCTCCTAAAGGAATCGAAGTAATCAGTCCTTGGGAAGTTCCACTTC TAAATACTGTTATTTTGCTTTCTTCAGGAGCAACAGTTACATGGGCTCAT CATAGTCTTGTAAGCGGGTCAAAAGAACAAGCACGTTTGGCGCTTTTTGC TACTTTATGTTTAGCTTTTACTTTTACTGCTCTTCAAGCTTATGAATATT TAAATGCTCCTTTTGGAATGTCTGATGGTGTATACGGTTCTACTTTTTAT ATGGCTACTGGATTTCATGGATTTCATGTACTTATTGGAACTATTTTTTT AGCAGTTAGTTTAGATCGTTTAATGAGTGATCATTTTACACGCGAACATC ATTTTGGTTTTGAAGCTGCGGCTTGGTATTGGCATTTTGTTGATGTTGTG TGGTTATTTTTATTTCTTACGATTTATTGGTGGGGAGGCGCATAAACATC TTAAAGGTATAATATTTAATTTTTATACCTTTTTATACTATTACGGAGTT GAACCTCTAACTCTAATGTGTAGTAAGTATATTCTATTTTTTATCAATCG TTATTCAAAATATTTAAACAGCATTTATTTTAGGGAAAAATTAGTTTTTA TATGATTATAAACATGTCTACTTCATAACTTCTCTTCTATTAGATGTCGT TTAGTGTTTGTTATCGTGGGTTTCTTAGAAGAGAAGTATAGAAGTTAAAA GTTAAAATAAATATTACAATTAATGAGCTTTCTGATTGGGTTAAACTTAC AAAATAACTTTTAATACAATTCGTTCGTACGTTCGGTTCGTTATAGTTAT ATTTTGTTCATAATCGTTGCAGTCTATCAACTTGAAAATTTTTAACTTTA ACTAAATTACAAAAAAAAAATAAAATTTAAATATAATTTTATTCTGTTGT TTAAGTAACTCAATTGGTAGAGTATCTCGCTTACAACGAGAAAGTTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1:28905..30701+

>mRNA_P-wetherbeei_contig1.13.1 ID=mRNA_P-wetherbeei_contig1.13.1|Name=mRNA_P-wetherbeei_contig1.13.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig1:28905..30701+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATTTACAGATTATGTCTAATTCTTCAATTTCTTCTATCTTAACACA
ACGCCATCCTTTTCATTTGGTAGAACCCAGCCCATGGCCTTTTTTGGCGG
CTTTAGCGTCGTTTTGCCTAACAGTAGGGGGGGTCCTTTATATGCATAAT
TATGCTTTAGGTGGAAATTTATTATTGTTAGGTTTTTTTGGAATGATAGC
TGTAATGGCCTTTTGGTGGCGTGATGTAATTCGTGAAGCGACTTGGGAAG
GACATCATACGGAAGCAGTACAAACTGGTTTACGTATAGGAATGATATTA
TTTATTGTGTCAGAAATAATGTTTTTCTTTGCATTCTTTTGGGCTTTTTT
TCATTCTAGCTTATCGCCTGTTTTCAATATAGGTGGTGTTTGGCCTCCTA
AAGGAATCGAAGTAATCAGTCCTTGGGAAGTTCCACTTCTAAATACTGTT
ATTTTGCTTTCTTCAGGAGCAACAGTTACATGGGCTCATCATAGTCTTGT
AAGCGGGTCAAAAGAACAAGCACGTTTGGCGCTTTTTGCTACTTTATGTT
TAGCTTTTACTTTTACTGCTCTTCAAGCTTATGAATATTTAAATGCTCCT
TTTGGAATGTCTGATGGTGTATACGGTTCTACTTTTTATATGGCTACTGG
ATTTCATGGATTTCATGTACTTATTGGAACTATTTTTTTAGCAGTTAGTT
TAGATCGTTTAATGAGTGATCATTTTACACGCGAACATCATTTTGGTTTT
GAAGCTGCGGCTTGGTATTGGCATTTTGTTGATGTTGTGTGGTTATTTTT
ATTTCTTACGATTTATTGGTGGGGAGGCGCATAA
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