mRNA_P-wetherbeei_contig1.13.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A7U3S048_9STRA (Cytochrome c oxidase subunit 3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3S048_9STRA) HSP 1 Score: 410 bits (1053), Expect = 1.560e-137 Identity = 192/267 (71.91%), Postives = 225/267 (84.27%), Query Frame = 3 Query: 489 SISSILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289 S S+ ++QRHPFHLV+PSPWP +AA+ + LT G V+YMHNY GG LLLLG ++ VM WWRD+IREAT+EGHHT AVQ GLR+GMILFIVSE+MFFFA FHSSL+P F+IGGVWPP GIE+ISPW VPLLNT++LLSSGATVTWAHH++V+G++EQA LAL TL LA FT LQA+EYL+APFGMSD VYG++FYMATGFHGFHV+IGT+FL V RL S HF+R+HHFGFEAAAWYWHFVDVVWLFLF+TIYWWG Sbjct: 3 SKSAKISQRHPFHLVDPSPWPLVAAMGALSLTFGAVMYMHNYRGGGQLLLLGLLTILFVMYTWWRDIIREATFEGHHTGAVQGGLRMGMILFIVSEVMFFFAXXXXXFHSSLAPAFSIGGVWPPAGIEIISPWGVPLLNTILLLSSGATVTWAHHAIVAGAREQALLALGGTLVLALFFTGLQAFEYLHAPFGMSDSVYGASFYMATGFHGFHVIIGTLFLFVCTLRLFSHHFSRQHHFGFEAAAWYWHFVDVVWLFLFITIYWWGS 269
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A2R4QQ89_9PHAE (Cytochrome c oxidase subunit 3 n=8 Tax=Fucales TaxID=3009 RepID=A0A2R4QQ89_9PHAE) HSP 1 Score: 407 bits (1046), Expect = 1.980e-136 Identity = 191/263 (72.62%), Postives = 218/263 (82.89%), Query Frame = 3 Query: 498 SILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 1286 S L QRHPFHLV+PSPWPF+AAL LT GGVLYMHNY+ GG LL+LG ++ VM WWRD+IREA +EG HT AVQ GLR+GMILFIVSE+MFFFAFFWAFF SSL+PVFNIGGVWPP GIE ISPW +PLLNT+ILLSSGA+VTWAHH++V+GSK++A L T A FT LQ +EY++APF MSD VYGS F+MATGFHGFHV+IGTIFL + RL DHF+R+ HFGFEAAAWYWHFVDVVWLFLFLTIYWWG Sbjct: 5 SKLIQRHPFHLVDPSPWPFVAALGGLSLTFGGVLYMHNYSGGGQLLILGVLTILYVMFTWWRDIIREALFEGQHTLAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPSGIEAISPWGLPLLNTIILLSSGASVTWAHHAIVAGSKKEALYGLAVTTIFAVIFTCLQGFEYISAPFSMSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYLDHFSRQRHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 267
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A0U1V199_SARFS (Cytochrome c oxidase subunit 3 n=199 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1V199_SARFS) HSP 1 Score: 406 bits (1044), Expect = 3.970e-136 Identity = 192/259 (74.13%), Postives = 214/259 (82.63%), Query Frame = 3 Query: 510 QRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 1286 QRHPFHLV+PSPWPF+AAL T GGVLYMHNY GG LL LG ++ VM WWRDVIREA++EG HT AVQ GLR+GMILFIVSE+MFFFAFFWAFF SSLSPVFNIGGVWPP GIE ISPW +PLLNT+ILLSSGA+VTW+HH++V G K +A L L T+ A FTALQ +EY+NAPF MSD VYGS F+MATGFHGFHV+IGTIFL V RL DHF+R+ HFGFEAAAWYWHFVDVVWLFLFLTIYWWG Sbjct: 9 QRHPFHLVDPSPWPFVAALGGLSSTFGGVLYMHNYDGGGQLLCLGLITILYVMFTWWRDVIREASFEGQHTAAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPAGIEAISPWGLPLLNTIILLSSGASVTWSHHAIVGGFKREALLGLVITILFAVIFTALQGFEYVNAPFAMSDSVYGSVFFMATGFHGFHVIIGTIFLCVCTFRLYLDHFSRQRHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 267
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A4D6C7H3_9CHLO (Cytochrome c oxidase subunit 3 n=1 Tax=Chloropicon maureeniae TaxID=1461542 RepID=A0A4D6C7H3_9CHLO) HSP 1 Score: 405 bits (1040), Expect = 1.290e-135 Identity = 185/260 (71.15%), Postives = 214/260 (82.31%), Query Frame = 3 Query: 510 QRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289 Q+HPFHLV+PSPWP L A+A++ T GGV+YMH+Y GG +L GF ++ M WWRDV++EAT+EGHHT+AVQ GLR GMILFIVSEIMFFFAFFWAFFHSSLSP +IG +WPPKGIEV+SPWEVP LNTVILLSSGA VTWAHH++V+G K+QA L T+ LA FT Q EY+ APF MSD VYGSTF++ATGFHGFHV IGT+FL V RLM++HFT HHFGFEAAAWYWHFVDVVWLFLF+TIYWWGG Sbjct: 6 QKHPFHLVDPSPWPLLGAIAAWTTTTGGVMYMHDYQGGGMMLTFGFITLLYTMFVWWRDVVQEATYEGHHTQAVQLGLRWGMILFIVSEIMFFFAFFWAFFHSSLSPSIDIGAIWPPKGIEVLSPWEVPFLNTVILLSSGAAVTWAHHAIVAGEKQQAFYGLIVTVLLAILFTGFQVLEYIEAPFSMSDSVYGSTFFLATGFHGFHVFIGTLFLIVCTFRLMANHFTPNHHFGFEAAAWYWHFVDVVWLFLFVTIYWWGG 265
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: C1KRA3_MICPC (Cytochrome c oxidase subunit 3 n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1KRA3_MICPC) HSP 1 Score: 404 bits (1038), Expect = 2.580e-135 Identity = 180/261 (68.97%), Postives = 216/261 (82.76%), Query Frame = 3 Query: 510 QRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGGA 1292 Q+HPFHLV+PSPWP A+L++FC TVGGV+YMH Y GG L LGF + M WWRDVIREAT+EGHHT VQTGL+ GM+LFIVSEIMFFFAFFWAFFHS+L+P IG +WPPKGIEV++PWE+P LNTVILL+SGATVTWAHH+++ G K++ ++L T+ LA FT QA EY+ APF ++DGVYGSTFY+ATGFHGFHV +GT+FL++ L R + DHFT+ HHFGFEAAAWYWHFVDVVWLFLF+ IYWWGGA Sbjct: 6 QKHPFHLVDPSPWPMFASLSAFCTTVGGVMYMHGYNGGGLLASLGFGMVCYTMVVWWRDVIREATFEGHHTSTVQTGLKYGMLLFIVSEIMFFFAFFWAFFHSALAPTIEIGAMWPPKGIEVLNPWEIPFLNTVILLTSGATVTWAHHAILGGKKQEVIVSLLFTIALASVFTGFQAMEYVEAPFTITDGVYGSTFYLATGFHGFHVFVGTVFLSICLVRTLKDHFTKAHHFGFEAAAWYWHFVDVVWLFLFVAIYWWGGA 266
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A140F2P5_9STRA (Cytochrome c oxidase subunit 3 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140F2P5_9STRA) HSP 1 Score: 404 bits (1037), Expect = 4.220e-135 Identity = 187/262 (71.37%), Postives = 219/262 (83.59%), Query Frame = 3 Query: 507 TQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGGA 1292 TQ+HPFH+V+PSPWP +AA ++ LT GGVLYMHNY+ GG+LLLLGF ++ VM WWRDVIREAT+EGHHT+AVQTGLR+G+ILFIVSE+MFF AFFWAFFHSSL+PV IGGVWPPK IEV+SPW +P LNTVILL+SGATVTWAH +++ +E A +L T+ A FT+ Q YEYL+A F MSDG+YG+ FYMATGFHGFHV IGT FL V L RL HFTREHHFGFEAAAWYWHFVDVVWLFLF++IYWWGG+ Sbjct: 9 TQKHPFHIVDPSPWPLVAAFSAMGLTTGGVLYMHNYSGGGSLLLLGFLFLLLVMFGWWRDVIREATFEGHHTKAVQTGLRMGVILFIVSEVMFFVAFFWAFFHSSLAPVPEIGGVWPPKAIEVMSPWGIPFLNTVILLTSGATVTWAHEAIIHNRREDAISSLIYTVLYAIYFTSFQVYEYLHAGFAMSDGIYGTVFYMATGFHGFHVFIGTCFLTVCLIRLYKYHFTREHHFGFEAAAWYWHFVDVVWLFLFVSIYWWGGS 270
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A649UDE3_AURAN (Cytochrome c oxidase subunit 3 n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A649UDE3_AURAN) HSP 1 Score: 403 bits (1036), Expect = 6.190e-135 Identity = 184/271 (67.90%), Postives = 222/271 (81.92%), Query Frame = 3 Query: 477 MSNSSISSILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289 M+ S+I Q+HPFHLV+PSPWP +A++ + C+T GGV+YMHNY+ GG L L G I VM WW+D++RE T+EG HT+ VQ GLR GMILFIVSE+MFFFAFFWAFFHSSLSP F+IGGVWPP+GIEV++PWEVPLLNTV+LLSSGATVTWAHH++V+GS++ A + L T+ LA FT QA EY +PF +SD VYG+TF++ATGFHGFHV+IGTIFL + RL+ HFTREHHFGFEAAAWYWHFVDVVWLFLF+TIYWWG Sbjct: 1 MNVSTIEYKNNQKHPFHLVDPSPWPLVASIGALCMTFGGVMYMHNYSGGGTLFLTGLSTTIFVMYTWWKDIVREGTYEGQHTKEVQQGLRSGMILFIVSEVMFFFAFFWAFFHSSLSPTFDIGGVWPPEGIEVLNPWEVPLLNTVLLLSSGATVTWAHHAIVAGSRKDAFIGLVLTVILAVIFTGFQALEYYTSPFTISDSVYGATFFLATGFHGFHVIIGTIFLTICTIRLIYHHFTREHHFGFEAAAWYWHFVDVVWLFLFVTIYWWGS 271
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: Q2TUF2_9PHAE (Cytochrome c oxidase subunit 3 n=14 Tax=Phaeophyceae TaxID=2870 RepID=Q2TUF2_9PHAE) HSP 1 Score: 403 bits (1035), Expect = 9.080e-135 Identity = 188/261 (72.03%), Postives = 215/261 (82.38%), Query Frame = 3 Query: 504 LTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWG 1286 + QRHPFHLV+PSPWP +AAL CLT GGVL+MHNY GG LL LG ++ VM WWRD+IREA +EG HT AVQ GLR+GMILFIVSE+MFFFAFFWAFF SS+SPVFNIGGVWPP GIE ISPW +P LNT++LLSSGA+VTWAHH++V G K++A L TL A FTALQ +EY++APF MSDGVYGS FYMATGFHGFHV+IGTIFLA+ RL HF+R+ HFGFEAAAWYWHFVDVVWLFLF+TIYWWG Sbjct: 7 MIQRHPFHLVDPSPWPLVAALGGLCLTFGGVLFMHNYNGGGQLLSLGVITILYVMFTWWRDIIREAAFEGQHTLAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSISPVFNIGGVWPPIGIEAISPWGLPFLNTILLLSSGASVTWAHHAIVGGFKKEALQGLGVTLAFAVAFTALQGFEYMHAPFAMSDGVYGSVFYMATGFHGFHVIIGTIFLAICTLRLYFHHFSRQRHFGFEAAAWYWHFVDVVWLFLFITIYWWG 267
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A4Y5T8S8_9PHAE (Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotaceae TaxID=2874 RepID=A0A4Y5T8S8_9PHAE) HSP 1 Score: 402 bits (1032), Expect = 2.230e-134 Identity = 183/262 (69.85%), Postives = 218/262 (83.21%), Query Frame = 3 Query: 504 LTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289 ++ RHPFHLV+PSPWP +A++ + LT GGV++MHNY+ GG LL LG ++ VM WWRD+IREA++EGHHT +VQ GLR+GMILFIVSE+MFFFAFFWAFF SSLSPVFNIGGVWPP G++VISPW +PLLNTV+LLSSGATVTWAHH++V G K +A+ AL+ TL A FT Q EY+ APF +SD VYGSTF+MATGFHGFHV+IGTIFL++ RL DHF+R+HHFGFEAAAWYWHFVDVVWL LFL IYWWG Sbjct: 7 VSHRHPFHLVDPSPWPIVASIGALSLTFGGVMFMHNYSGGGQLLSLGVLTILYVMGIWWRDIIREASFEGHHTSSVQDGLRLGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPSGLDVISPWGLPLLNTVLLLSSGATVTWAHHAIVGGLKYEAQSALYVTLTFAIYFTVFQILEYVEAPFSISDSVYGSTFFMATGFHGFHVIIGTIFLSICAVRLYVDHFSRQHHFGFEAAAWYWHFVDVVWLILFLGIYWWGA 268
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Match: A0A4D6C5B1_9CHLO (Cytochrome c oxidase subunit 3 n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A4D6C5B1_9CHLO) HSP 1 Score: 398 bits (1023), Expect = 4.920e-133 Identity = 184/266 (69.17%), Postives = 215/266 (80.83%), Query Frame = 3 Query: 492 ISSILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNYALGGNLLLLGFFGMIAVMAFWWRDVIREATWEGHHTEAVQTGLRIGMILFIVSEIMFFFAFFWAFFHSSLSPVFNIGGVWPPKGIEVISPWEVPLLNTVILLSSGATVTWAHHSLVSGSKEQARLALFATLCLAFTFTALQAYEYLNAPFGMSDGVYGSTFYMATGFHGFHVLIGTIFLAVSLDRLMSDHFTREHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGG 1289 +SS QRHPFHLV+PSPWP ++L + T G VL+MH Y GG + LGF G++ M WWRDV++EAT+EGHHT AVQTGLR GMILFIVSEIMFFFAFFWAFFHSS+SP +IGG+WPPKGIEV+SPWEVPLLNT+ILL SGA+VTWAHH ++ G K+Q +L T+ LA FT LQ EY+ APF +SDGVYG TF++ATGFHGFHVLIGTIFL V L R ++ HFT HHFGFEAAAWYWHFVDVVWLFLF++IYWWGG Sbjct: 1 MSSSAIQRHPFHLVDPSPWPIFSSLCALTTTTGAVLWMHGYENGGFVFSLGFAGILYAMIVWWRDVVKEATYEGHHTHAVQTGLRWGMILFIVSEIMFFFAFFWAFFHSSVSPAIDIGGIWPPKGIEVLSPWEVPLLNTLILLLSGASVTWAHHGILCGEKKQIVYSLIVTVILAAIFTGLQGLEYVEAPFSISDGVYGCTFFLATGFHGFHVLIGTIFLTVCLFRQLAGHFTPSHHFGFEAAAWYWHFVDVVWLFLFVSIYWWGG 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1.13.1 >prot_P-wetherbeei_contig1.13.1 ID=prot_P-wetherbeei_contig1.13.1|Name=mRNA_P-wetherbeei_contig1.13.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp MDLQIMSNSSISSILTQRHPFHLVEPSPWPFLAALASFCLTVGGVLYMHNback to top mRNA from alignment at P-wetherbeei_contig1:28905..30701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1.13.1 ID=mRNA_P-wetherbeei_contig1.13.1|Name=mRNA_P-wetherbeei_contig1.13.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1797bp|location=Sequence derived from alignment at P-wetherbeei_contig1:28905..30701+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1:28905..30701+ >mRNA_P-wetherbeei_contig1.13.1 ID=mRNA_P-wetherbeei_contig1.13.1|Name=mRNA_P-wetherbeei_contig1.13.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig1:28905..30701+ (Phaeothamnion wetherbeei SAG_119_79)back to top |