prot_P-canaliculata_contig10155.243.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10155.243.1
Unique Nameprot_P-canaliculata_contig10155.243.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length140
Homology
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BLAST of mRNA_P-canaliculata_contig10155.243.1 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 9.520e-27
Identity = 63/79 (79.75%), Postives = 67/79 (84.81%), Query Frame = 0 
Query:    1 MATNGSELFLDRATRVRKIHQIAQFLASIENKDPQDRNLHTLAQKFENQIFSAAMNVEDYNNRIHKKLTKVQKVRQQQA 79
            MA NGSELFLDR TRVRKI QIA FLA IE KDPQDR+LH LAQKFENQIF+AAMNVEDYN RI+KKL+KV   R QQA
Sbjct:    1 MAANGSELFLDRNTRVRKIQQIATFLAQIEGKDPQDRSLHGLAQKFENQIFTAAMNVEDYNTRINKKLSKV---RHQQA 76
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BLAST of mRNA_P-canaliculata_contig10155.243.1 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.870e-9
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 0 
Query:    5 GSEL-FLDRATRVRKIHQIAQFLASIENKDPQDRNLHTLAQKFENQIFSAAMNVEDYNNRIHKKLTKVQKV 74
            GS+L  +DR    R   QIA+FLA++E KD  D +LH LA +FENQIFS A++ +DY  RI+KKL++V+K+
Sbjct:    7 GSDLQHVDRHACTR---QIAEFLANLEGKDKNDASLHELAGRFENQIFSVAVDFKDYQERINKKLSRVRKL 74
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10155.243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNQ0_9PHAE9.520e-2779.75KIX_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CHY1_9STRA2.870e-952.11KIX_2 domain-containing protein n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..77
NoneNo IPR availableGENE3D1.10.246.20coord: 7..84
e-value: 2.2E-9
score: 39.2
IPR036546Mediator complex subunit 15, KIX domainPFAMPF16987KIX_2coord: 11..80
e-value: 8.9E-10
score: 38.4
IPR036529Coactivator CBP, KIX domain superfamilySUPERFAMILY47040Kix domain of CBP (creb binding protein)coord: 25..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10155contigP-canaliculata_contig10155:2207..7300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10155.243.1mRNA_P-canaliculata_contig10155.243.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10155 2207..8801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10155.243.1 ID=prot_P-canaliculata_contig10155.243.1|Name=mRNA_P-canaliculata_contig10155.243.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=140bp
MATNGSELFLDRATRVRKIHQIAQFLASIENKDPQDRNLHTLAQKFENQI
FSAAMNVEDYNNRIHKKLTKVQKVRQQQAAAVQAKQGSQSLEQARLHQHQ
QQQQALQQRRRAPHQRQPHQQVTGGSLLQQQGLPIQTSTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036546MED15_KIX
IPR036529KIX_dom_sf