prot_P-canaliculata_contig9956.24064.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9956.24064.1
Unique Nameprot_P-canaliculata_contig9956.24064.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length376
Homology
BLAST of mRNA_P-canaliculata_contig9956.24064.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 9.330e-68
Identity = 132/368 (35.87%), Postives = 197/368 (53.53%), Query Frame = 0
Query:   19 ASGAYTREEVDLPSPEELFPDVKCPLHCEDLFGKLEDGPSGKTQSVRLQVRGEPKSGTGMVGEWSWGALAHMCLYLQRLYGLESCRVVWK---NDRDNANFRVETHSI-------IFEPEL------AARDKSKPCTCIGVKKVDVTLSAGRKHMLPVDPTCRWFHARGITKKGFRACEPPDGGPVENHPQLWACVQESMCNIKDDSLQIAVLRDPRAVTVSSYFQLARQKSPMLDKEKVESVDHFFMNHLDSIAQWISLRYVLFTQIMPERSEVFWYEDAVADPIEWHGRYYNFVGLCPPPRVIHHASAIATKGGSILGFPAKGLDYHPDGEEQAPTRTFRDELSTESIAMMDDVLRKWLPPIILRR 370
            + GA++  E       +L  D +CP  CE +FGKL    +G  Q V LQ+RGEPKSGT  + EW+  AL   C  L RLYG  +C   W+   + R       ET  +       +F+P        A    + PC C  V KV + +S+  KH LPV P+C W H   +T +  + C   +G  V N+     C+Q+  C I DD +Q+ +LRDPRAV VSS+F L     P       ESVD F +  L +I  +I LRY++  + +  ++  F Y++++ADP++WH R+ + VGL PPP V+  A+  + +     GF  KG+D HP G+E    RT+ DE+S +    ++ + R+WLPP++L +
Sbjct:   61 SGGAWSSLETGSTGLRKLQAD-ECPP-CETMFGKL----NGAQQHVELQLRGEPKSGTSFMFEWAVNALMVTCEELGRLYGEGTCTFRWRGFFSRRKQKPVSPETALVDMKEVFFVFKPNRQHGRSSAGGPSASPCPCSTVDKVSIMVSSLFKHDLPVPPSCPWQHVDNVTPEN-KGCTTVNGRRVGNYTDTVECLQQHPCRIVDDRIQMLILRDPRAVAVSSFFHLKTHHHPFWKHLTDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVVLQATNTSLR--REYGFAGKGVDKHPGGKEATEKRTWEDEISHDVAEQLEGICREWLPPVLLEK 419          
BLAST of mRNA_P-canaliculata_contig9956.24064.1 vs. uniprot
Match: A0A6H5KDV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV7_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 9.020e-44
Identity = 88/234 (37.61%), Postives = 131/234 (55.98%), Query Frame = 0
Query:  143 VKKVDVTLSAGRKHMLPVDPTCRWFHARGITKKGFRACEPPDGGPVENHPQLWACVQESMCNIKDDSLQIAVLRDPRAVTVSSYFQLARQKSPMLDKEKVE-SVDHFFMNHLDSIAQWISLRYVLFTQIMPERSEVFWYEDAVADPIEWHGRYYNFVGLCPPPRVIHHASAIATKGGSILGFPA-----KGLDYHPDGEEQAPTRTFRDELSTESIAMMDDVLRKWLPPIILRR 370
            +++V++++S   KH LPV+ +C W H  G   +G   C   DG PVE    LWAC+Q++ C I D+ LQ   +RDPRAV VS+YF    + +   + +K+  S+D   +  L  +  + +LR++LF  ++  R+E+FWYE  V DP +WH R+ +F GL  P             GG I G  A     K L+ HP G E +  RT++DE+S      MD +LRKWLP ++L R
Sbjct:    2 LRRVEISISTVDKHRLPVNESCPWSHGSGTVHEGD-GCWSFDGHPVETGADLWACMQKTPCEITDNRLQFVPIRDPRAVAVSTYFHRVHKDN---NYQKLHPSLDQTVLEILPVLCHFTTLRHILFGGLLSNRTELFWYEQTVEDPFDWHYRWASFAGLILP-------------GGWIDGMVAENQAHKHLNPHPGGAETSDNRTWQDEVSPGIRPEMDSILRKWLPGVLLAR 218          
BLAST of mRNA_P-canaliculata_contig9956.24064.1 vs. uniprot
Match: A0A6H5JG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG38_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 9.820e-27
Identity = 63/166 (37.95%), Postives = 94/166 (56.63%), Query Frame = 0
Query:  207 DDSLQIAVLRDPRAVTVSSYFQLARQKSPMLDK-EKVESVDHFFMNHLDSIAQWISLRYVLFTQIMPERSEVFWYEDAVADPIEWHGRYYNFVGLCPPPRVIHHASAIATKGGSILGFPAKGLDYHPDGEEQAPTRTFRDELSTESIAMMDDVLRKWLPPIILRRL 371
            DDSLQ AVLRDPRAV VS+YF +    +   D   + +S+D   +  L  + Q+ ++R++LF   + ++SE+FWYEDA+ DP+ WH R+ +F G   P   I    A   +    +       D HP G++ +  RT+ DE+S      MD +LR WLP ++L RL
Sbjct:   27 DDSLQFAVLRDPRAVAVSTYFYVKSHPAFYSDHVSRGKSLDEAVLLILPQLCQFTTIRHLLFDGQLSDKSEIFWYEDAMRDPLGWHYRWASFAGFALPASWIKDIDATLPEAQQKVK-----RDPHPGGQQVSSKRTWEDEISPAIREEMDSILRTWLPGVLLERL 187          
BLAST of mRNA_P-canaliculata_contig9956.24064.1 vs. uniprot
Match: D7G2T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T4_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 8.970e-24
Identity = 55/156 (35.26%), Postives = 88/156 (56.41%), Query Frame = 0
Query:  215 LRDPRAVTVSSYFQLARQKSPMLDKEKVESVDHFFMNHLDSIAQWISLRYVLFTQIMPERSEVFWYEDAVADPIEWHGRYYNFVGLCPPPRVIHHASAIATKGGSILGFPAKGLDYHPDGEEQAPTRTFRDELSTESIAMMDDVLRKWLPPIILRR 370
            +RDPRAV VS+YF + R    +    + +S+D   +  L  I Q+ ++R++LF   + +RSE+FWYEDA+ DP+ W+ R+ +  G   P R I    A  T+         +  + HP G+  +  RT+ DE+S E+   M+ +LR WLP ++L R
Sbjct:    1 MRDPRAVAVSTYFYIKRSPIHLHHPSRGKSLDEAVVVILPQICQFTTIRHILFDGQLSDRSEIFWYEDAMRDPLGWYNRWASLAGFTLPARWIKDIQASLTEAAEN----DRKREPHPGGQVVSSDRTWEDEVSPETRLEMNSILRTWLPGVLLAR 152          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9956.24064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJE4_ECTSI9.330e-6835.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDV7_9PHAE9.020e-4437.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG38_9PHAE9.820e-2737.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2T4_ECTSI8.970e-2435.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000863Sulfotransferase domainPFAMPF00685Sulfotransfer_1coord: 212..362
e-value: 3.0E-6
score: 26.9
NoneNo IPR availableGENE3D3.40.50.300coord: 191..364
e-value: 4.2E-7
score: 31.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..375
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.591
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 207..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9956contigP-canaliculata_contig9956:4432..10599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9956.24064.1mRNA_P-canaliculata_contig9956.24064.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9956 4357..11656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9956.24064.1 ID=prot_P-canaliculata_contig9956.24064.1|Name=mRNA_P-canaliculata_contig9956.24064.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=376bp
MIKLGSIAAIALSLGACRASGAYTREEVDLPSPEELFPDVKCPLHCEDLF
GKLEDGPSGKTQSVRLQVRGEPKSGTGMVGEWSWGALAHMCLYLQRLYGL
ESCRVVWKNDRDNANFRVETHSIIFEPELAARDKSKPCTCIGVKKVDVTL
SAGRKHMLPVDPTCRWFHARGITKKGFRACEPPDGGPVENHPQLWACVQE
SMCNIKDDSLQIAVLRDPRAVTVSSYFQLARQKSPMLDKEKVESVDHFFM
NHLDSIAQWISLRYVLFTQIMPERSEVFWYEDAVADPIEWHGRYYNFVGL
CPPPRVIHHASAIATKGGSILGFPAKGLDYHPDGEEQAPTRTFRDELSTE
SIAMMDDVLRKWLPPIILRRLRLID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000863Sulfotransferase_dom
IPR027417P-loop_NTPase