mRNA_P-canaliculata_contig99393.24052.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig99393.24052.1
Unique NamemRNA_P-canaliculata_contig99393.24052.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: A0A088FPR8_9EUGL (Translation elongation factor-like protein n=1 Tax=Procryptobia sorokini TaxID=351715 RepID=A0A088FPR8_9EUGL)

HSP 1 Score: 617 bits (1591), Expect = 4.150e-220
Identity = 309/333 (92.79%), Postives = 315/333 (94.59%), Query Frame = 1
Query:   10 MAEHEGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETVKVECLLDALNKMVNLPPRNVTAPLRAPVSQCLSIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV 1008
            MAEHEGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAY+MDNQKAERERGIT               TIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLI+GVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKK+QIE+EIPIIPMAGFLGENILKKSDKMPWWNGMDIKV+TTGET KVECLLDALNKMVNLPPRNV APLRAPVSQCL IKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPC+GKVFSIEMHHKEHNQAGPGDNV
Sbjct:    1 MAEHEGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYYMDNQKAERERGITXXXXXXXXXXXXXXXTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIIGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKEQIESEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVSTTGETCKVECLLDALNKMVNLPPRNVAAPLRAPVSQCLGIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCTGKVFSIEMHHKEHNQAGPGDNV 333          
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: C1K9W9_TRYBO (Elongation factor 1 alpha-like protein (Fragment) n=1 Tax=Trypanoplasma borreli TaxID=5710 RepID=C1K9W9_TRYBO)

HSP 1 Score: 597 bits (1539), Expect = 2.150e-214
Identity = 298/334 (89.22%), Postives = 313/334 (93.71%), Query Frame = 1
Query:   10 MAEHEGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETV-KVECLLDALNKMVNLPPRNVTAPLRAPVSQCLSIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV 1008
            MAE+EGK+HVSIVVAGHVDAGKSSLTGRLLYDLGGI++R MEKLRKIAEENGKPSFAFAY MDNQKAERERGITIACNTKEFYT RYHYTIIDAPGHRDFIKNMI+GSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDS+ + YSQARY EVA EMKRILLQEGWKKDQIE EIPIIPMAGF GEN+LKKSDKMPWWNG+D+KVA TG TV  V+CLLDALN MVNLPPR+ TAPLRAPVSQCLSIKGVGDVLTMRIEQG++ KGDEVIFLPTHT+S PC GKVFSIEMHHKEH  AG GDNV
Sbjct:    1 MAENEGKAHVSIVVAGHVDAGKSSLTGRLLYDLGGIDERAMEKLRKIAEENGKPSFAFAYXMDNQKAERERGITIACNTKEFYTERYHYTIIDAPGHRDFIKNMISGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSDGQPYSQARYNEVASEMKRILLQEGWKKDQIENEIPIIPMAGFHGENMLKKSDKMPWWNGVDVKVAATGGTVVHVDCLLDALNNMVNLPPRDNTAPLRAPVSQCLSIKGVGDVLTMRIEQGQLVKGDEVIFLPTHTSSTPCQGKVFSIEMHHKEHATAGAGDNV 334          
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: C1K9W8_9EUGL (Elongation factor 1 alpha-like protein (Fragment) n=2 Tax=Neobodo TaxID=312470 RepID=C1K9W8_9EUGL)

HSP 1 Score: 508 bits (1308), Expect = 7.520e-178
Identity = 250/318 (78.62%), Postives = 284/318 (89.31%), Query Frame = 1
Query:   61 VDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDS-LDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETVKVECLLDALNKMVNLPPRNVTAPLRAPVSQCL-SIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV 1008
            VDAGKSSLTGRLLYD+GGI++R MEKL+K AEENGKPSFAFAY++DNQKAE+ERGITIACNTKEFYT RYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLG+KQLIVG+NKMDS +D+E+  YS+ R+ E++ E+KRILLQEGWKKDQIE EIPI+P+AGF GEN+LK SDKMPWW G+ +   TT + +KV CLLDALN MVNLPPRN    LRAPV + + SIKG+  V+T R+EQG + KGDEV+FLPTHTASNPC GKVFSIEMHH+EH++AGPGDNV
Sbjct:    1 VDAGKSSLTGRLLYDMGGIDERTMEKLKKKAEENGKPSFAFAYYLDNQKAEQERGITIACNTKEFYTERYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGIKQLIVGINKMDSSVDNET--YSEKRFIEISTEVKRILLQEGWKKDQIEKEIPILPLAGFHGENLLKASDKMPWWKGVTVFDPTTKKDIKVNCLLDALNDMVNLPPRNTEGALRAPVGKVITSIKGIECVVTSRLEQGTLVKGDEVVFLPTHTASNPCVGKVFSIEMHHREHDKAGPGDNV 316          
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: A0A6T2JK96_9EUGL (Hypothetical protein n=4 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2JK96_9EUGL)

HSP 1 Score: 476 bits (1224), Expect = 8.760e-165
Identity = 234/302 (77.48%), Postives = 264/302 (87.42%), Query Frame = 1
Query:  106 LGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETVKVECLLDALNKMVNLPPRNVTAPLRAPVSQCL-SIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV 1008
            +GGI++R MEKL+K AEENGKPSFAFAY+MDNQKAE+ERGITIACNTKEFYT+RYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADG SFIASIAKGDHKTGEVPGQTRNHARLLNLLG++QLIVGVNKMDS   ++ QY + RY E++ E+KRILLQEGWKKDQIE EIP+IPMAGF GENILK S+KMPWW G+DI++    + VKV CLLDALN MV+LPPRN     R PV + + SIKG+  V+T R+EQG + KGDEV+FLPTHTASNPC GKVFSIEMHHKEH +AGPGDNV
Sbjct:    1 MGGIDERVMEKLKKKAEENGKPSFAFAYYMDNQKAEQERGITIACNTKEFYTNRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGSSFIASIAKGDHKTGEVPGQTRNHARLLNLLGIRQLIVGVNKMDST-VDNVQYGEKRYVEISTEVKRILLQEGWKKDQIEKEIPVIPMAGFHGENILKISEKMPWWKGVDIQIPGGSDKVKVSCLLDALNDMVSLPPRNTEGAFRGPVGKVITSIKGIECVVTSRLEQGTLVKGDEVVFLPTHTASNPCVGKVFSIEMHHKEHAKAGPGDNV 301          
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: A0A7S4GEW8_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GEW8_9EUGL)

HSP 1 Score: 439 bits (1130), Expect = 4.410e-153
Identity = 219/279 (78.49%), Postives = 246/279 (88.17%), Query Frame = 1
Query:   10 MAEHEGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETVKVECLLDALNKMVNLPPRNVTAPLRAPVSQCL-SIKG 843
            M++ +GK HVSIVVAGHVDAGKSSLTGRLLYD+GGI++R MEKL+K AEENGKPSFAFAY+MDNQKAE+ERGITIACNTKEFYT+RYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADG SFIASIAKGDHKTGEVPGQTRNHARLLNLLG++QLIVGVNKMDS   ++ QY + RY E++ E+KRILLQEGWKKDQIE EIP+IPMAGF GENILK S+KMPWW G+DI++    + VKV CLLDALN MV+LPPRN     R PV + + SIKG
Sbjct:    1 MSDKDGKQHVSIVVAGHVDAGKSSLTGRLLYDMGGIDERVMEKLKKKAEENGKPSFAFAYYMDNQKAEQERGITIACNTKEFYTNRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGSSFIASIAKGDHKTGEVPGQTRNHARLLNLLGIRQLIVGVNKMDST-VDNVQYGEKRYVEISTEVKRILLQEGWKKDQIEKEIPVIPMAGFHGENILKISEKMPWWKGVDIQIPGGSDKVKVSCLLDALNDMVSLPPRNTEGAFRGPVGKVITSIKG 278          
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: A0A1C8EGD4_9EUKA (Elongation factor 1-alpha-like protein (Fragment) n=1 Tax=Salpingoeca punica TaxID=1924735 RepID=A0A1C8EGD4_9EUKA)

HSP 1 Score: 429 bits (1102), Expect = 4.290e-146
Identity = 209/329 (63.53%), Postives = 263/329 (79.94%), Query Frame = 1
Query:   22 EGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETVKVECLLDALNKMVNLPPRNVTAPLRAPVSQCLSIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV 1008
            +GK HVSIVV GHVDAGKS+ TGRL+++LGGI +R+M+KLR+ A+  GK SFAFA+++D QK ERERG+TI+C TKEF+T   HYT+IDAPGHRDFIKNMITG+SQADVALL+ PADG +F A+IAKG+HK GEV GQTR HA L+NLLGVKQ+IVGVNKMD    ++  Y + RY+E+  EM+ +LL+ GWKK+ +E EIP+IP++G++G+N++KKSDKM WW G+D++V    ET+ V+ LLDAL+KMV  P R    P+R P+S    IKGVGDVLT R+EQG V  G+EVIFLPTHT S PC GKVF++EMHHK   QA PGDNV
Sbjct:    3 DGKQHVSIVVCGHVDAGKSTTTGRLIFELGGIPEREMQKLREEADRLGKGSFAFAFYLDRQKEERERGVTISCTTKEFFTPTKHYTVIDAPGHRDFIKNMITGASQADVALLMVPADG-NFTAAIAKGNHKAGEVQGQTRQHAVLINLLGVKQVIVGVNKMDC---DTANYGEPRYKEIRDEMQHLLLKGGWKKEAVEKEIPVIPISGWIGDNLIKKSDKMAWWTGVDVQVDK--ETIHVDTLLDALDKMVRQPARPTDKPMRTPISGVFKIKGVGDVLTGRVEQGLVKPGEEVIFLPTHTTSTPCVGKVFTVEMHHKSVEQAQPGDNV 325          
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: A0A087SK74_AUXPR (Elongation factor 1-alpha n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SK74_AUXPR)

HSP 1 Score: 427 bits (1099), Expect = 1.350e-145
Identity = 203/329 (61.70%), Postives = 264/329 (80.24%), Query Frame = 1
Query:   22 EGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETVKVECLLDALNKMVNLPPRNVTAPLRAPVSQCLSIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV 1008
            EGK+H+SIV+ GHVD+GKS+ TGRLL++LGGI +R++EKL++ A   GK SFAFA++MD QK ERERG+TIAC TKEF+T ++HYTIIDAPGHRDFIKNMI+G++QADV LL+ PADG +F  +I KGDHK GE+ GQTR HARLLNLLGVKQLIVGVNKMDS   +  +Y++ RY+E+A EM+ +L++ GWK D ++  +PI+P++G++G+N++ KS  MPWW G+D+ +      V V  LLDALN MV++P R   APLR P+S    IKGVGDVL  R+EQG V  GDEV+F+PTHTA+NPC+GKVF++EMHHK  ++AGPGDNV
Sbjct:    3 EGKTHLSIVICGHVDSGKSTTTGRLLFELGGIPERELEKLKEEAAALGKSSFAFAFYMDRQKEERERGVTIACTTKEFFTEKWHYTIIDAPGHRDFIKNMISGAAQADVCLLMVPADG-NFTTAIQKGDHKAGEIQGQTRQHARLLNLLGVKQLIVGVNKMDS---DVAKYTEDRYKEIANEMRHMLIRVGWKPDFVQKSVPIVPISGWMGDNLITKSTNMPWWTGVDVDIIK--RKVHVHTLLDALNDMVDVPERKADAPLRLPISGAYKIKGVGDVLAGRVEQGIVKPGDEVVFMPTHTAANPCTGKVFTVEMHHKRVDKAGPGDNV 325          
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: A0A0D2JVB6_9CHLO (Elongation factor Tu, chloroplastic n=5 Tax=Sphaeropleales TaxID=35491 RepID=A0A0D2JVB6_9CHLO)

HSP 1 Score: 426 bits (1095), Expect = 5.640e-145
Identity = 204/329 (62.01%), Postives = 261/329 (79.33%), Query Frame = 1
Query:   22 EGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETVKVECLLDALNKMVNLPPRNVTAPLRAPVSQCLSIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV 1008
            EGK H+SIV+ GHVD+GKS+ TGRLL++LGGI +R++EKL++ A   GK SFAFA++MD QK ERERG+TIAC TKEF+T ++HYTIIDAPGHRDFIKNMI+G++QADV LL+ PADG +F  +I KGDHK GE+ GQTR HARL+NLLGV+QLI+GVNKMDS   ++  Y + RY+E+  EMK +L + GWK D IE  +P++P++G++G+N++KKS+ M WW+G+++K      TVKV  LLDALN MV +P R   APLR P+S    IKGVGDVL  R+EQG V  GDEVIFLPTHT +NPC GKVF++EMHHK  ++AGPGDNV
Sbjct:    3 EGKQHLSIVICGHVDSGKSTTTGRLLFELGGIPERELEKLKEEAAALGKQSFAFAFYMDRQKEERERGVTIACTTKEFFTEKWHYTIIDAPGHRDFIKNMISGAAQADVCLLMVPADG-NFTTAIQKGDHKAGEIQGQTRQHARLINLLGVRQLIIGVNKMDS---DTAGYKEERYKEIRDEMKHMLARVGWKPDFIEKSVPVVPISGWMGDNLIKKSENMKWWDGVEVKTIDA-RTVKVTTLLDALNDMVIVPERKTDAPLRVPISGAYKIKGVGDVLAGRVEQGIVKPGDEVIFLPTHTTANPCVGKVFTVEMHHKRVDKAGPGDNV 326          
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: D8TNN3_VOLCA (Elongation factor Tu, chloroplastic n=16 Tax=Chlamydomonadales TaxID=3042 RepID=D8TNN3_VOLCA)

HSP 1 Score: 422 bits (1086), Expect = 1.310e-143
Identity = 206/329 (62.61%), Postives = 261/329 (79.33%), Query Frame = 1
Query:   22 EGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETVKVECLLDALNKMVNLPPRNVTAPLRAPVSQCLSIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV 1008
            EGK H+SIV+ GHVD+GKS+ TGRLL++LGGI +R++EKL++ A   GK SFAFA++MD  K ERERG+TIAC TKEF+T ++HYTIIDAPGHRDFIKNMI+G++QADV LL+ PADG +F  +I KGDHK GE+ GQTR HARL+NLLGVKQLIVGVNKMDS   ++  Y + RY+E+A EMK +L++ GWK+D +   +PI+P++G+LG+N++ KS  MPW+ G  + V  +GE V V  LLDALN  V +P R V APLR P+S    IKGVGDVL  R+EQG V  GDEVIFLPTHTA+NPC+GKVF++EMHHK  ++AGPGDNV
Sbjct:    3 EGKVHLSIVICGHVDSGKSTTTGRLLFELGGIPERELEKLKEEAAALGKSSFAFAFYMDRAKEERERGVTIACTTKEFFTEKWHYTIIDAPGHRDFIKNMISGAAQADVCLLMVPADG-NFTTAIQKGDHKAGEIQGQTRQHARLINLLGVKQLIVGVNKMDS---DTAGYKKERYDEIANEMKHMLVRVGWKEDFVNKSVPILPISGWLGDNLIAKSANMPWYTGQTV-VNLSGEKVAVHTLLDALNAFVVVPERKVDAPLRLPISGAYKIKGVGDVLAGRVEQGVVKPGDEVIFLPTHTAANPCTGKVFTVEMHHKRVDKAGPGDNV 326          
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Match: A4S6B6_OSTLU (Eukaryotic elongation factor 1 alpha n=4 Tax=Ostreococcus TaxID=70447 RepID=A4S6B6_OSTLU)

HSP 1 Score: 422 bits (1085), Expect = 2.110e-143
Identity = 202/330 (61.21%), Postives = 258/330 (78.18%), Query Frame = 1
Query:   22 EGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEENGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDFIKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLLNLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQIEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIK-VATTGETVKVECLLDALNKMVNLPPRNVTAPLRAPVSQCLSIKGVGDVLTMRIEQGEVAKGDEVIFLPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV 1008
            EGK H+SIV+ GHVD+GKS+ TGRLL++LGGI +R++EKLR  A+  GK SFAFA++MD QK ERERG+TI+C TKEF+T ++HYTIIDAPGHRDFIKNMI+G++QADVALL+ PADG +F  +I KG+HK GEV GQTR HARLLNLLGVKQLI G+NKMD    +   Y Q RYEE+  EMK +L++ GWKKD +E  +P++P++G+ G+N+L KS KMPWWNG+D++     G+   ++CLL+ LN MV+ P RN  A +R P+S    IKGVGDVL  R+EQG V  G++V+FLPTHT+SNPC GKVF++EMHHK    A PGDNV
Sbjct:    3 EGKEHLSIVICGHVDSGKSTTTGRLLFELGGIPERELEKLRAEADALGKSSFAFAFYMDRQKEERERGVTISCTTKEFFTDKWHYTIIDAPGHRDFIKNMISGAAQADVALLMVPADG-NFTVAIQKGNHKAGEVQGQTRQHARLLNLLGVKQLICGINKMDC---DMAGYKQERYEEIRNEMKNMLIKVGWKKDYVEKSVPVLPISGWNGDNLLSKSAKMPWWNGVDVEDYMGGGKKFHIDCLLNVLNDMVDKPDRNTEAAMRLPISGVYKIKGVGDVLAGRVEQGLVKPGEDVVFLPTHTSSNPCGGKVFTVEMHHKRVEAAAPGDNV 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99393.24052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A088FPR8_9EUGL4.150e-22092.79Translation elongation factor-like protein n=1 Tax... [more]
C1K9W9_TRYBO2.150e-21489.22Elongation factor 1 alpha-like protein (Fragment) ... [more]
C1K9W8_9EUGL7.520e-17878.62Elongation factor 1 alpha-like protein (Fragment) ... [more]
A0A6T2JK96_9EUGL8.760e-16577.48Hypothetical protein n=4 Tax=Eutreptiella gymnasti... [more]
A0A7S4GEW8_9EUGL4.410e-15378.49Hypothetical protein (Fragment) n=2 Tax=Eutreptiel... [more]
A0A1C8EGD4_9EUKA4.290e-14663.53Elongation factor 1-alpha-like protein (Fragment) ... [more]
A0A087SK74_AUXPR1.350e-14561.70Elongation factor 1-alpha n=3 Tax=Auxenochlorella ... [more]
A0A0D2JVB6_9CHLO5.640e-14562.01Elongation factor Tu, chloroplastic n=5 Tax=Sphaer... [more]
D8TNN3_VOLCA1.310e-14362.61Elongation factor Tu, chloroplastic n=16 Tax=Chlam... [more]
A4S6B6_OSTLU2.110e-14361.21Eukaryotic elongation factor 1 alpha n=4 Tax=Ostre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99393contigP-canaliculata_contig99393:38..1045 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score428.7
Seed ortholog evalue2.5e-117
Seed eggNOG ortholog3075.A0A087SK74
KEGG koko:K03231
KEGG Pathwayko03013,ko05134,map03013,map05134
EggNOG free text desc.regulation of response to stimulus
EggNOG OGs34H6Y@3041,37KSK@33090,COG5256@1,KOG0052@2759
COG Functional cat.J
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012,ko03016,ko03019,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons1
Model size1008
Cds size999
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817353.9298928-UTR-P-canaliculata_contig99393:37..461622817353.9298928-UTR-P-canaliculata_contig99393:37..46Pelvetia canaliculata dioeciousUTRP-canaliculata_contig99393 38..46 +
1693495242.5104496-UTR-P-canaliculata_contig99393:37..461693495242.5104496-UTR-P-canaliculata_contig99393:37..46Pelvetia canaliculata dioeciousUTRP-canaliculata_contig99393 38..46 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817353.9429657-CDS-P-canaliculata_contig99393:46..10451622817353.9429657-CDS-P-canaliculata_contig99393:46..1045Pelvetia canaliculata dioeciousCDSP-canaliculata_contig99393 47..1045 +
1693495242.5234845-CDS-P-canaliculata_contig99393:46..10451693495242.5234845-CDS-P-canaliculata_contig99393:46..1045Pelvetia canaliculata dioeciousCDSP-canaliculata_contig99393 47..1045 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99393.24052.1prot_P-canaliculata_contig99393.24052.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig99393 47..1045 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig99393.24052.1

>prot_P-canaliculata_contig99393.24052.1 ID=prot_P-canaliculata_contig99393.24052.1|Name=mRNA_P-canaliculata_contig99393.24052.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=333bp
MAEHEGKSHVSIVVAGHVDAGKSSLTGRLLYDLGGINDRDMEKLRKIAEE
NGKPSFAFAYFMDNQKAERERGITIACNTKEFYTSRYHYTIIDAPGHRDF
IKNMITGSSQADVALLLCPADGGSFIASIAKGDHKTGEVPGQTRNHARLL
NLLGVKQLIVGVNKMDSLDSESKQYSQARYEEVAKEMKRILLQEGWKKDQ
IEAEIPIIPMAGFLGENILKKSDKMPWWNGMDIKVATTGETVKVECLLDA
LNKMVNLPPRNVTAPLRAPVSQCLSIKGVGDVLTMRIEQGEVAKGDEVIF
LPTHTASNPCSGKVFSIEMHHKEHNQAGPGDNV
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mRNA from alignment at P-canaliculata_contig99393:38..1045+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig99393.24052.1 ID=mRNA_P-canaliculata_contig99393.24052.1|Name=mRNA_P-canaliculata_contig99393.24052.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1008bp|location=Sequence derived from alignment at P-canaliculata_contig99393:38..1045+ (Pelvetia canaliculata dioecious)
GTCCTAACCATGGCTGAACACGAGGGAAAGTCCCACGTTTCTATTGTCGT TGCCGGTCACGTCGATGCCGGTAAGTCCTCCCTCACCGGACGTCTCCTCT ACGATCTCGGAGGTATCAACGACCGTGATATGGAGAAGCTCCGCAAGATT GCCGAGGAGAACGGAAAGCCCTCCTTCGCCTTCGCCTACTTCATGGACAA CCAGAAGGCCGAGCGCGAGCGCGGTATCACCATTGCCTGCAACACCAAGG AGTTCTACACTTCCCGCTACCACTACACCATCATCGATGCCCCCGGACAT CGTGACTTCATCAAGAACATGATCACCGGCTCCTCCCAGGCCGATGTTGC CCTTCTCCTGTGCCCCGCCGACGGTGGTAGCTTCATCGCCTCCATCGCCA AGGGCGACCACAAGACCGGCGAGGTTCCCGGCCAGACCCGTAACCACGCC CGTCTCCTCAACCTCCTCGGCGTGAAGCAGCTCATCGTCGGTGTCAACAA GATGGACTCCCTCGACTCCGAGAGCAAGCAGTACTCCCAGGCCCGTTACG AGGAGGTCGCCAAGGAGATGAAGCGCATTCTCCTCCAGGAGGGATGGAAG AAGGACCAGATCGAGGCCGAGATCCCCATCATCCCCATGGCTGGTTTCCT CGGAGAGAACATCCTCAAGAAGTCCGACAAGATGCCCTGGTGGAACGGTA TGGACATCAAGGTTGCCACCACCGGCGAGACCGTCAAGGTCGAGTGCCTC CTCGATGCCCTCAACAAGATGGTGAACCTTCCCCCCCGTAACGTCACCGC TCCCCTCCGCGCCCCCGTCTCCCAGTGCCTCAGCATCAAGGGTGTCGGAG ACGTGCTGACCATGCGCATCGAGCAGGGTGAGGTCGCCAAGGGCGACGAG GTCATCTTCCTCCCCACCCACACCGCCTCCAACCCTTGCTCCGGAAAGGT CTTCTCCATCGAGATGCACCACAAGGAGCACAACCAGGCTGGCCCCGGCG ACAACGTC
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Coding sequence (CDS) from alignment at P-canaliculata_contig99393:38..1045+

>mRNA_P-canaliculata_contig99393.24052.1 ID=mRNA_P-canaliculata_contig99393.24052.1|Name=mRNA_P-canaliculata_contig99393.24052.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1998bp|location=Sequence derived from alignment at P-canaliculata_contig99393:38..1045+ (Pelvetia canaliculata dioecious)
ATGGCTGAACACGAGGGAAAGTCCCACGTTTCTATTGTCGTTGCCGGTCA
CGTCGATGCCGGTAAGTCCTCCCTCACCGGACGTCTCCTCTACGATCTCG
GAGGTATCAACGACCGTGATATGGAGAAGCTCCGCAAGATTGCCGAGGAG
AACGGAAAGCCCTCCTTCGCCTTCGCCTACTTCATGGACAACCAGAAGGC
CGAGCGCGAGCGCGGTATCACCATTGCCTGCAACACCAAGGAGTTCTACA
CTTCCCGCTACCACTACACCATCATCGATGCCCCCGGACATCGTGACTTC
ATCAAGAACATGATCACCGGCTCCTCCCAGGCCGATGTTGCCCTTCTCCT
GTGCCCCGCCGACGGTGGTAGCTTCATCGCCTCCATCGCCAAGGGCGACC
ACAAGACCGGCGAGGTTCCCGGCCAGACCCGTAACCACGCCCGTCTCCTC
AACCTCCTCGGCGTGAAGCAGCTCATCGTCGGTGTCAACAAGATGGACTC
CCTCGACTCCGAGAGCAAGCAGTACTCCCAGGCCCGTTACGAGGAGGTCG
CCAAGGAGATGAAGCGCATTCTCCTCCAGGAGGGATGGAAGAAGGACCAG
ATCGAGGCCGAGATCCCCATCATCCCCATGGCTGGTTTCCTCGGAGAGAA
CATCCTCAAGAAGTCCGACAAGATGCCCTGGTGGAACGGTATGGACATCA
AGGTTGCCACCACCGGCGAGACCGTCAAGGTCGAGTGCCTCCTCGATGCC
CTCAACAAGATGGTGAACCTTCCCCCCCGTAACGTCACCGCTCCCCTCCG
CGCCCCCGTCTCCCAGTGCCTCAGCATCAAGGGTGTCGGAGACGTGCTGA
CCATGCGCATCGAGCAGGGTGAGGTCGCCAAGGGCGACGAGGTCATCTTC
CTCCCCACCCACACCGCCTCCAACCCTTGCTCCGGAAAGGTCTTCTCCAT
CGAGATGCACCACAAGGAGCACAACCAGGCTGGCCCCGGCGACAACGTCA
TGGCTGAACACGAGGGAAAGTCCCACGTTTCTATTGTCGTTGCCGGTCAC
GTCGATGCCGGTAAGTCCTCCCTCACCGGACGTCTCCTCTACGATCTCGG
AGGTATCAACGACCGTGATATGGAGAAGCTCCGCAAGATTGCCGAGGAGA
ACGGAAAGCCCTCCTTCGCCTTCGCCTACTTCATGGACAACCAGAAGGCC
GAGCGCGAGCGCGGTATCACCATTGCCTGCAACACCAAGGAGTTCTACAC
TTCCCGCTACCACTACACCATCATCGATGCCCCCGGACATCGTGACTTCA
TCAAGAACATGATCACCGGCTCCTCCCAGGCCGATGTTGCCCTTCTCCTG
TGCCCCGCCGACGGTGGTAGCTTCATCGCCTCCATCGCCAAGGGCGACCA
CAAGACCGGCGAGGTTCCCGGCCAGACCCGTAACCACGCCCGTCTCCTCA
ACCTCCTCGGCGTGAAGCAGCTCATCGTCGGTGTCAACAAGATGGACTCC
CTCGACTCCGAGAGCAAGCAGTACTCCCAGGCCCGTTACGAGGAGGTCGC
CAAGGAGATGAAGCGCATTCTCCTCCAGGAGGGATGGAAGAAGGACCAGA
TCGAGGCCGAGATCCCCATCATCCCCATGGCTGGTTTCCTCGGAGAGAAC
ATCCTCAAGAAGTCCGACAAGATGCCCTGGTGGAACGGTATGGACATCAA
GGTTGCCACCACCGGCGAGACCGTCAAGGTCGAGTGCCTCCTCGATGCCC
TCAACAAGATGGTGAACCTTCCCCCCCGTAACGTCACCGCTCCCCTCCGC
GCCCCCGTCTCCCAGTGCCTCAGCATCAAGGGTGTCGGAGACGTGCTGAC
CATGCGCATCGAGCAGGGTGAGGTCGCCAAGGGCGACGAGGTCATCTTCC
TCCCCACCCACACCGCCTCCAACCCTTGCTCCGGAAAGGTCTTCTCCATC
GAGATGCACCACAAGGAGCACAACCAGGCTGGCCCCGGCGACAACGTC
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