prot_P-canaliculata_contig99302.24045.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig99302.24045.1
Unique Nameprot_P-canaliculata_contig99302.24045.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length177
Homology
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match: A0A518GAF9_9BACT (Phosphocholine transferase AnkX n=1 Tax=Aureliella helgolandensis TaxID=2527968 RepID=A0A518GAF9_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 3.930e-13
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 0
Query:    4 GCTLVFAAVLILTSTRATAQTQTSESMPRLADLAESQHWDWLDKPLSDDAIQQA-QPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLACELG 105
            G  LV+ ++   ++     ++ +S S   L DLAE Q W  +   L+      A QPDGT+ LHWAVFH +  AI+ L+A   DVN    YQV+PLSLACE G
Sbjct:   12 GYLLVWCSIRPASAPAFQQESGSSVSPATLPDLAEHQRWTDVASQLAQGEPPTATQPDGTTALHWAVFHNHPEAIQLLLATSADVNAETHYQVTPLSLACEFG 114          
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match: UPI001E3405EA (ankyrin repeat domain-containing protein n=2 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI001E3405EA)

HSP 1 Score: 75.9 bits (185), Expect = 7.410e-13
Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 0
Query:   31 PRLADLAESQHWDWLDKPL---SDDAIQQAQPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLACELG 105
            P LADLAE   W  L   L   +D  +QQ  PDGT+ LHWAV+H++Q +I+ LI AG++V+  N+Y V+PL++AC  G
Sbjct:   45 PSLADLAERSEWVNLKLKLRSGADPNVQQ--PDGTTALHWAVYHQDQPSIDALIEAGVEVDVPNKYDVTPLAIACRYG 120          
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match: A0A848WVR8_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A848WVR8_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 1.360e-10
Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query:   33 LADLAESQHWDWLDKPLSDDAIQQA-QPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLACELGH 106
            L+DLAE+Q+W  ++K L++ A   A QPDGT+ LHWA +H  +  ++ L+ AG   +  NR+  +PLSLAC  G+
Sbjct:   24 LSDLAEAQNWRAVEKALTEKADPNAAQPDGTTALHWAAYHDREQVVKTLLEAGGKPDARNRFDATPLSLACTNGN 98          
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match: A0A517MDK1_9BACT (Phosphocholine transferase AnkX n=2 Tax=Roseimaritima multifibrata TaxID=1930274 RepID=A0A517MDK1_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 3.890e-9
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   33 LADLAESQHWDWLDKPLS--DDAIQQAQPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLA 101
            LADLAE + WD +   L   +DA  + QPDGT+ LHWA F+     +++L   G D++  NRYQVSPLSLA
Sbjct:   18 LADLAEGKDWDRVSAMLEKGEDAGSK-QPDGTTALHWAAFYDQAEMVKRLAKHGADLDALNRYQVSPLSLA 87          
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match: UPI001E56697A (ankyrin repeat domain-containing protein n=2 Tax=unclassified Rhodopirellula TaxID=2624920 RepID=UPI001E56697A)

HSP 1 Score: 54.7 bits (130), Expect = 1.510e-5
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   56 QAQPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLACELGHEPAA 110
            Q+QPDG + + WA +H     IE+L AAG D++ + +Y VSPLSLA E G+  +A
Sbjct:   72 QSQPDGMTAVLWAAYHDQPQWIERLHAAGADLDVSTQYLVSPLSLASEFGNMESA 126          
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match: A0A2V8FBE4_9BACT (Uncharacterized protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8FBE4_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 2.820e-5
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 0
Query:   54 IQQAQPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLAC 102
            +     DGTS LHWAV   +  A++ L+ AG   + TNRY V+PLSLAC
Sbjct:  118 VNDTDVDGTSALHWAVHRDDVNAVDLLLGAGAKASATNRYGVTPLSLAC 166          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A518GAF9_9BACT3.930e-1342.72Phosphocholine transferase AnkX n=1 Tax=Aureliella... [more]
UPI001E3405EA7.410e-1348.72ankyrin repeat domain-containing protein n=2 Tax=R... [more]
A0A848WVR8_9BACT1.360e-1044.00Uncharacterized protein n=1 Tax=Verrucomicrobiales... [more]
A0A517MDK1_9BACT3.890e-949.30Phosphocholine transferase AnkX n=2 Tax=Roseimarit... [more]
UPI001E56697A1.510e-547.27ankyrin repeat domain-containing protein n=2 Tax=u... [more]
A0A2V8FBE4_9BACT2.820e-548.98Uncharacterized protein n=2 Tax=Acidobacteria bact... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 93..122
e-value: 270.0
score: 9.3
coord: 60..89
e-value: 0.13
score: 21.3
coord: 126..155
e-value: 3.2E-5
score: 33.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 126..158
score: 12.636
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 60..92
score: 10.579
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 25..177
e-value: 2.9E-35
score: 123.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 57..176
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 98..176
e-value: 2.1E-12
score: 47.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 60..177
score: 31.298
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 127..176
coord: 60..151
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 127..176
coord: 60..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.846

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99302contigP-canaliculata_contig99302:4..534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99302.24045.1mRNA_P-canaliculata_contig99302.24045.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig99302 4..534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig99302.24045.1 ID=prot_P-canaliculata_contig99302.24045.1|Name=mRNA_P-canaliculata_contig99302.24045.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=177bp
MRFGCTLVFAAVLILTSTRATAQTQTSESMPRLADLAESQHWDWLDKPLS
DDAIQQAQPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSL
ACELGHEPAALSLIKAKADVQSQRLGRETPLMFAARNGNAEIVSALIEAG
ANVDAQEVNGQTALIWAAAEGSSKCID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom