prot_P-canaliculata_contig99150.24031.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig99150.24031.1
Unique Nameprot_P-canaliculata_contig99150.24031.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length78
Homology
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: UPI001184779B (DUF308 domain-containing protein n=1 Tax=Pleionea sediminis TaxID=2569479 RepID=UPI001184779B)

HSP 1 Score: 70.1 bits (170), Expect = 3.340e-14
Identity = 35/65 (53.85%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    2 KKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKK 66
            KK L+T  G+ LLL+G +F+ILPGP  LI+ LAL +L++EYP+A+KWL + QK+MK+ + WAD++
Sbjct:    5 KKALVTATGLLLLLIGVVFIILPGPAVLIIPLALGVLAIEYPIAKKWLRVFQKKMKQSAEWADRR 69          
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: A0KY34_SHESA (Uncharacterized protein n=7 Tax=Shewanella TaxID=22 RepID=A0KY34_SHESA)

HSP 1 Score: 61.6 bits (148), Expect = 9.650e-11
Identity = 31/72 (43.06%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLADRKR 72
            M + +IT +G    L+G IFL+LPGPG L +++ LTLLS +YP A++WL ++Q+++ K +AW D ++   +R
Sbjct:   17 MTRTVITVIGACFTLVGGIFLLLPGPGLLFILIGLTLLSTQYPWAKRWLRLSQRQLTKSAAWLDNQIRRHRR 88          
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: Q0HU62_SHESR (Integral membrane protein TerC n=2 Tax=unclassified Shewanella TaxID=196818 RepID=Q0HU62_SHESR)

HSP 1 Score: 60.1 bits (144), Expect = 3.900e-10
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    6 ITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKL 67
            IT +G    L+G IFL+LPGPG L +++ LTLLS +YP A++WL ++Q+++ K +AW D ++
Sbjct:   22 ITVLGACFTLIGGIFLLLPGPGLLFILIGLTLLSTQYPWAKRWLRLSQRQLSKSAAWLDNQI 83          
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: A0A316G2W2_9GAMM (Uncharacterized protein (TIGR02611 family) n=1 Tax=Pleionea mediterranea TaxID=523701 RepID=A0A316G2W2_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 4.220e-10
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    2 KKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKK 66
            KK L+T +G  +LL+G +F++LPGP  LI+ L L LL+ EYP+A KWL   Q+++   + WAD K
Sbjct:    5 KKTLVTLIGTLILLVGVVFIVLPGPAVLIIPLGLALLATEYPIAEKWLRRFQRQLSSSAKWADAK 69          
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: A0A2D6RDX3_9GAMM (Tellurium resistance protein TerC n=1 Tax=Colwelliaceae bacterium TaxID=2026726 RepID=A0A2D6RDX3_9GAMM)

HSP 1 Score: 58.2 bits (139), Expect = 1.710e-9
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    1 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLADRKR 72
            M+K+LIT VG  L  +G +F+++PGP FL L + L +LS+EYPLA+KWL   Q+ M+K +   D+ L   KR
Sbjct:    5 MRKILITLVGGLLAFMGLVFVLVPGPAFLFLPVGLAILSLEYPLAKKWLKKCQRWMRKGAEQTDRMLGKLKR 76          
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: UPI00048DFBE4 (PGPGW domain-containing protein n=1 Tax=Shewanella TaxID=22 RepID=UPI00048DFBE4)

HSP 1 Score: 57.8 bits (138), Expect = 2.200e-9
Identity = 28/67 (41.79%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    1 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKL 67
            ++K ++T +G     LG +F++LPGP +L+L + L +LS+EYP A+++L I+Q++M + +AW DKK+
Sbjct:    2 LRKTMVTIIGGLTTALGVVFILLPGPAWLLLPIGLAILSLEYPWAKRYLRISQRKMSQSAAWMDKKI 68          
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: A0A7G5HZT8_9GAMM (Uncharacterized protein n=2 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A7G5HZT8_9GAMM)

HSP 1 Score: 56.6 bits (135), Expect = 5.690e-9
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    1 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLA 68
            MKK+L+  +GI  +LLG IF+I+PGP  L  I+ L   S  YPLAR++L   QK + K  A+ DKKLA
Sbjct:    1 MKKILLVSLGILSMLLGLIFVIVPGPSLLFFIVGLLCFSFYYPLARRYLVYCQKALTKSCAYLDKKLA 68          
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: A0A6N8FEE9_9GAMM (Tellurium resistance protein TerC n=2 Tax=Psychrosphaera haliotis TaxID=555083 RepID=A0A6N8FEE9_9GAMM)

HSP 1 Score: 55.1 bits (131), Expect = 2.600e-8
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    1 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLADRK 71
            +K+L I  VG +L+L+G IF+++PGP  L+LI  L +LS EY +AR WL   Q  +KK + W D K+  RK
Sbjct:    2 LKQLFIHLVGGSLVLMGLIFIVVPGPSLLLLIPGLYILSFEYEIARVWLKKCQLMLKKSANWIDSKIRARK 72          
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: UPI001FD0B3E1 (PGPGW domain-containing protein n=1 Tax=Psychrosphaera aestuarii TaxID=1266052 RepID=UPI001FD0B3E1)

HSP 1 Score: 54.3 bits (129), Expect = 5.600e-8
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    1 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLADRK 71
            +K+L I  VG  L+LLG IF+++PGP  L+LI  L +LS EY +AR WL   Q  +KK + W D K+  R+
Sbjct:    4 LKQLFIHLVGGTLVLLGLIFIVVPGPSLLLLIPGLYILSFEYEIARVWLRKCQVMLKKSANWLDNKIRARR 74          
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match: UPI001C085687 (tellurium resistance protein TerC n=2 Tax=Pseudoalteromonas TaxID=53246 RepID=UPI001C085687)

HSP 1 Score: 53.5 bits (127), Expect = 1.020e-7
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWL 49
            MKK+ IT VG  LLL+G +F+ILPGP  +++ LAL LLS EYP+A++WL
Sbjct:    4 MKKIAITLVGGFLLLIGLLFIILPGPAIIVIPLALVLLSKEYPIAKQWL 52          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
UPI001184779B3.340e-1453.85DUF308 domain-containing protein n=1 Tax=Pleionea ... [more]
A0KY34_SHESA9.650e-1143.06Uncharacterized protein n=7 Tax=Shewanella TaxID=2... [more]
Q0HU62_SHESR3.900e-1046.77Integral membrane protein TerC n=2 Tax=unclassifie... [more]
A0A316G2W2_9GAMM4.220e-1047.69Uncharacterized protein (TIGR02611 family) n=1 Tax... [more]
A0A2D6RDX3_9GAMM1.710e-947.22Tellurium resistance protein TerC n=1 Tax=Colwelli... [more]
UPI00048DFBE42.200e-941.79PGPGW domain-containing protein n=1 Tax=Shewanella... [more]
A0A7G5HZT8_9GAMM5.690e-950.00Uncharacterized protein n=2 Tax=Pseudoalteromonas ... [more]
A0A6N8FEE9_9GAMM2.600e-846.48Tellurium resistance protein TerC n=2 Tax=Psychros... [more]
UPI001FD0B3E15.600e-846.48PGPGW domain-containing protein n=1 Tax=Psychrosph... [more]
UPI001C0856871.020e-759.18tellurium resistance protein TerC n=2 Tax=Pseudoal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019099Uncharacterised protein family PGPGW, transmembranePFAMPF09656PGPGWcoord: 4..54
e-value: 3.0E-14
score: 52.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..77
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 6.0
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99150contigP-canaliculata_contig99150:323..556 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99150.24031.1mRNA_P-canaliculata_contig99150.24031.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig99150 323..559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig99150.24031.1 ID=prot_P-canaliculata_contig99150.24031.1|Name=mRNA_P-canaliculata_contig99150.24031.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=78bp
MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLT
ITQKRMKKVSAWADKKLADRKRAKYEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019099Uncharacterised_PGPGW_TM