prot_P-canaliculata_contig101493.239.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
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POSITION
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LESLGFPKAKSLHFLGLEAVDLKISFDRLSLDPFVDCLAAAAEFTSNPNIALHLGHKFRVGTFGQTGNLYAYCKNLREVIPMNNRYQKIAIDAGQAEYFKDDQGRQHMCFRPHYSDIEKYRAITDIIMGSYVTTYRWLTWGSGEDILSTHLPYPRPKNLDAHEQIFKSKLVFDSNHTCLEFSDAAMNQVITTHDPERLLRARTKLDQILGLQMANKAFEAAIDVALRGAIESGQVSAEIVADRMGLSRSAFRAKMNASGEGLRPRLDRIRKKMFVEKYRDGQNFSQIAMSLAYNDQAAMNKAFKRWFGITPSKWSKQNATAET*50100150200250300Expect = 3.9E-6 / Score = 36.4Expect = 1.6E-9 / Score = 37.9Score = 13.048Expect = 6.8E-23 / Score = 81.7Expect = 1.7E-13 / Score = 52.4Score = Score = SequenceSM00342PF12833PS01124PF12625G3DSA:1.10.10.60PTHR47894SSF46689
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018060DNA binding HTH domain, AraC-typeSMARTSM00342aracneu4coord: 234..315
e-value: 3.9E-6
score: 36.4
IPR018060DNA binding HTH domain, AraC-typePFAMPF12833HTH_18coord: 241..316
e-value: 1.6E-9
score: 37.9
IPR018060DNA binding HTH domain, AraC-typePROSITEPS01124HTH_ARAC_FAMILY_2coord: 265..317
score: 13.048
IPR032687HTH-type transcriptional regulator AraC-type, N-terminalPFAMPF12625Arabinose_bdcoord: 12..187
e-value: 6.8E-23
score: 81.7
NoneNo IPR availableGENE3D1.10.10.60coord: 214..322
e-value: 1.7E-13
score: 52.4
NoneNo IPR availablePANTHERPTHR47894FAMILY NOT NAMEDcoord: 2..320
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 280..317