prot_P-canaliculata_contig98420.23943.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98420.23943.1
Unique Nameprot_P-canaliculata_contig98420.23943.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length220
Homology
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: UPI001675EEE4 (VTT domain-containing protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001675EEE4)

HSP 1 Score: 304 bits (778), Expect = 2.210e-102
Identity = 151/215 (70.23%), Postives = 183/215 (85.12%), Query Frame = 0
Query:    5 RALFWLIGSLLIPVLLVLAAKQIFNIDQAELFAALQALSESPWAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSGSLMAVFFAGLAGVAILFSWAARKRLEARSHI 219
            RA  WLI SLL PVLLVL AKQ   ++Q++    + +L +SPWA+P+TI LFCGLAF+GAPQWML+TG V+AFG WEG +L+W+GSLAAA+LGFW+G  VGAERL+R+DA+LI+++SAAVRKNGFMTSLV+RLVPTGPAILVNLAAGVSRMKF HF  GT IGI+PKI+V+ +ISQG+ISGLSGS+MA+ FA LA VAI  SW ARKRLEARS +
Sbjct:    4 RATIWLIVSLLTPVLLVLLAKQFLGVNQSDFIEMMTSLRDSPWAVPITIGLFCGLAFIGAPQWMLVTGAVVAFGPWEGSLLAWIGSLAAASLGFWVGHLVGAERLQRIDAQLIQKLSAAVRKNGFMTSLVIRLVPTGPAILVNLAAGVSRMKFSHFATGTAIGIVPKIVVIAMISQGIISGLSGSVMAIIFAALAVVAIGVSWLARKRLEARSSL 218          
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: UPI00040E8AED (VTT domain-containing protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI00040E8AED)

HSP 1 Score: 184 bits (467), Expect = 6.540e-55
Identity = 98/210 (46.67%), Postives = 139/210 (66.19%), Query Frame = 0
Query:    5 RALFWLIGSLLIPVLLVLAAKQIFNIDQAELFAALQALSESPWAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSGSLMAVFFAGLAGVAILFSWAARKRLE 214
            RAL  L+    + +LL+L  + + ++ ++E     + L ES + +P+TI  F   AF+GAPQW LI G ++AFG   GG+ +W+ ++ +A+L FW+G+ +GAERL+R    L+ RI   VR+NG +TS  VR VPTGP +LVN+AAGVSRM F  F  GT IGIIPKI +V L++QGLISG  G ++   F GLA + + F + ARKRL 
Sbjct:   17 RALSVLLVMFGVVILLILLGQDMLSLQESEFHRFFEYLRESGYGLPLTILTFILAAFLGAPQWALIAGVIVAFGPATGGVYAWIATMVSASLDFWLGRWIGAERLQRYGGDLVNRIVRIVRRNGLVTSFAVRFVPTGPFVLVNMAAGVSRMTFPSFFLGTAIGIIPKIAIVALVAQGLISGSEGKVVMTVFIGLALLLVGFMFLARKRLR 226          
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: A0A848V543_9PROT (TVP38/TMEM64 family membrane protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V543_9PROT)

HSP 1 Score: 155 bits (393), Expect = 7.520e-44
Identity = 90/210 (42.86%), Postives = 126/210 (60.00%), Query Frame = 0
Query:    5 RALFWLIGSLLIPVLLVLAAKQIFNIDQAELFAALQALSESPWAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSGSLMAVFFAGLAGVAILFSWAARKRLE 214
            RA+  +I   ++   + L  K   N+   E  +    +  SP A  + +  F   AF+G PQW LI     AFG+W GG  +W+ +L +A+L FW+ + VGAER+ +    L+ RI+  VR+NGFMTS  VRLVPTGP ILVN+AAGVS+MK+ HF AGT +GIIPKI++V LI+QG++S        +    LA + +     ARKRL 
Sbjct:   15 RAVLVVIAMFIVVGAIALIGKASLNLGAGENLSWFNNVKSSPLAWFIVLISFVIGAFLGVPQWALIAAMTTAFGLWIGGAGAWICTLISASLNFWLARWVGAERVSQYGGDLVNRIADIVRRNGFMTSFAVRLVPTGPFILVNMAAGVSQMKYAHFTAGTALGIIPKIVIVGLITQGILSEDGNIWTRIIPIALAILFVGLMLLARKRLR 224          
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: UPI000370F07D (VTT domain-containing protein n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI000370F07D)

HSP 1 Score: 155 bits (392), Expect = 1.090e-43
Identity = 86/215 (40.00%), Postives = 132/215 (61.40%), Query Frame = 0
Query:   10 LIGSLLIPVLLVLAAKQIFNIDQAELFAALQALSESPWAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSG-----SLMAVFFAGLAGVAILFSWAARKRLEARSHI 219
            LIG  +  V L + A+ +F I ++++   L  LS+SPWA+ + I +F   AF+G PQW LI  +V+AFG   G   SW+ ++ +AA+ FW G+ +G + L RL    + R  A +RK+GF  S  VRLVP+GP +LVN+AAG+S MKF H++ GT +GI+PKI+ +  + + LI+ LSG     +L  + F  + G+  +    AR R   R++I
Sbjct:   15 LIGGAIAVVALFMVARHVFGITESDVNTLLSGLSDSPWAVLILILVFVLAAFIGVPQWALIGASVIAFGPVMGAAYSWLATMISAAVDFWAGRLLGEKHLARLRRPWVERFVARLRKSGFWVSFGVRLVPSGPFVLVNMAAGMSGMKFIHYLGGTALGIMPKILAIAFLGESLIAALSGDPWRIALAMIGFIIVIGIGYVL---ARSRAAKRANI 226          
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: A0A2G2GHZ0_9PROT (TVP38/TMEM64 family membrane protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GHZ0_9PROT)

HSP 1 Score: 154 bits (389), Expect = 3.660e-43
Identity = 83/188 (44.15%), Postives = 126/188 (67.02%), Query Frame = 0
Query:    1 ILTARALFWLIGSLLIPVLLVLAAKQIFNIDQAELFAALQALSESPWAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSG 188
            IL  R++F+ IG+LL+  L+VL+  Q  N D   +   ++ +S  P AIPV   L+  LAFV APQWML   +VLAFG  +G +++W  ++ +A+  FW+G+ +GAER+ +L   ++ ++   V K+GF TSL+VR+VPTGP ++VN+AAGV+RMKF  F  GT IG+IPKI+ +    +GL   ++G
Sbjct:    7 ILRKRSVFFWIGALLLIGLVVLS--QTLNFDPKSIGVWVETISSWPLAIPVMFLLYTLLAFVSAPQWMLHGASVLAFGPLQGALIAWGATMVSASFDFWLGRRMGAERVGKLTGGVVTKLIDIVEKHGFWTSLIVRIVPTGPFVVVNMAAGVTRMKFWAFFVGTAIGVIPKIVTISFFGEGLQGAVTG 192          
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: A0A2G2GCX4_9PROT (TVP38/TMEM64 family membrane protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GCX4_9PROT)

HSP 1 Score: 152 bits (383), Expect = 3.730e-42
Identity = 81/185 (43.78%), Postives = 120/185 (64.86%), Query Frame = 0
Query:   37 AALQALSESPWAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSG---SLMAVFFAGLAGVAILFSWAARKRLEARSH 218
            A LQAL +    +P  I +F  +  VG PQ++LITG+++AFG   G + +W G++ +A++ FW+G+ +GA  L R   K + RI A VR+NGF +++++R+VPTGP I+VNLA GVSR KFG F++GTGIGI PKI+ +    QG+ S ++    S M +FFA LAG+  L  W   +    R +
Sbjct:   53 ALLQALRQDERGLPAVIMVFVVMGLVGVPQFVLITGSIIAFGPSTGALYAWAGTMVSASVDFWLGRMIGAGPLNRFGGKWVVRIMALVRRNGFWSAMLLRVVPTGPFIMVNLAFGVSRAKFGQFLSGTGIGIWPKILALAFAGQGIFSFMARQNLSAMVLFFA-LAGIIFLIVWVLGRAWRRRQN 236          
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: A0A328A9B8_9CAUL (TVP38/TMEM64 family membrane protein n=1 Tax=Phenylobacterium deserti TaxID=1914756 RepID=A0A328A9B8_9CAUL)

HSP 1 Score: 149 bits (376), Expect = 3.750e-41
Identity = 76/177 (42.94%), Postives = 113/177 (63.84%), Query Frame = 0
Query:   43 SESPWAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGL--SGSLMAVFFA-GLAGVAILFSWAARKRLEAR 216
            +  PWA+PV +A F  LAFVG PQ+MLI   V+AFG W G   SW+G++ ++ +GF+IG+  GA  LR   ++ +R+    V +NGF+ S++VRLVP+ P I+VN+AAGV+ M+  HF AGT +GI+PKI +       +   +   G +  VF   GL  + ++ +W ARK L+AR
Sbjct:   55 ASGPWALPVAVAAFAILAFVGVPQFMLIAAAVVAFGAWTGFAYSWIGTMVSSLVGFYIGRLAGARTLRTFSSEGMRQFMELVGRNGFLASMIVRLVPSAPFIVVNMAAGVTPMRVRHFTAGTALGIVPKIALTAFAGNSIFQVMRGQGGVRHVFVVVGLGALWLIIAWVARKWLKAR 231          
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: A0A1G2WBX8_9CAUL (TVP38/TMEM64 family membrane protein n=3 Tax=unclassified Phenylobacterium TaxID=2640670 RepID=A0A1G2WBX8_9CAUL)

HSP 1 Score: 148 bits (373), Expect = 8.470e-41
Identity = 74/193 (38.34%), Postives = 117/193 (60.62%), Query Frame = 0
Query:   26 QIFNIDQAELFAALQALSESPWAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSGSLMA--VFFAGLAGVAILFSWAARKRLEAR 216
            Q+  +D           +  PW++PV +A F  LAFVG PQ +LI   V+AFG   G + SW+G++ +A +GF++G+  GA+ L R   + ++R    V +NGF+ SL+VRLVP+ P I+VN+AAGV+ M+  HFVAGTG+GI+PKI++       ++  + G +    +  A +A + +   W AR+ L+ R
Sbjct:   38 QLLGVDSERTLEGWLGAARGPWSLPVAVAAFAALAFVGTPQIVLIAAAVVAFGPQAGAVYSWIGTMVSALVGFYLGRAAGAQTLARFSGEGVQRFMRLVGENGFLASLIVRLVPSAPFIVVNMAAGVTPMRALHFVAGTGVGIVPKIVLTAYAGASIVEIMRGEIAGNWLTIAAVAALWLAIGWFARRWLQRR 230          
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: B4RFD0_PHEZH (TVP38/TMEM64 family membrane protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) TaxID=450851 RepID=B4RFD0_PHEZH)

HSP 1 Score: 145 bits (367), Expect = 9.070e-40
Identity = 75/173 (43.35%), Postives = 108/173 (62.43%), Query Frame = 0
Query:   47 WAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSGSLMAVFFAGLAGVAILF---SWAARKRLEAR 216
            WA+PV +  F GLAFVG PQ+MLI   V+ FG W G   SW+G++ +A +GF++G+  GA  L     + +R+    V +NGF+ SL+VRLVP+ P I+VN+AAGV+ M+   F AGT +GI+PKI +       ++  + G   A   A L G+A+L+    W ARK L+AR
Sbjct:   59 WALPVAVLAFAGLAFVGVPQFMLIAAAVVVFGAWAGFAYSWIGTMVSAVIGFYLGRAAGARTLATFSGEGLRQFMELVGRNGFLASLIVRLVPSAPFIVVNMAAGVTPMRARDFAAGTALGIVPKIALTAFAGNSVVQVMRGQGGAGHLALLVGIAVLWLVIGWYARKWLKAR 231          
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Match: A0A0Q8MR46_9CAUL (TVP38/TMEM64 family membrane protein n=1 Tax=Phenylobacterium sp. Root700 TaxID=1736591 RepID=A0A0Q8MR46_9CAUL)

HSP 1 Score: 145 bits (366), Expect = 1.120e-39
Identity = 73/176 (41.48%), Postives = 109/176 (61.93%), Query Frame = 0
Query:   43 SESPWAIPVTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWIGKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAAGVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSGS--LMAVFFAGLAGVAILFSWAARKRLEAR 216
            S+ PWA+PV +  F  LAFVG PQ++LI   V+AFG W G   SW+G++ ++ +GF++G+  GA  L+ L  + ++R    V +NGF+ SL+VRLVP+ P I+VN+AAGV+ M+   F AGT +GIIPKI++       ++  L G      V+   +  V I   W AR  L++R
Sbjct:   56 SDGPWALPVAVTAFAALAFVGVPQFVLIAAAVVAFGAWTGFAYSWIGTMVSSLVGFYLGRAAGARALKTLSGESMQRFMDLVGRNGFLASLIVRLVPSAPFIVVNMAAGVTPMRMRDFAAGTALGIIPKIVLTAFAGNSIVQVLKGEGGSHIVWLVVIVAVWIAIGWFARNWLKSR 231          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98420.23943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001675EEE42.210e-10270.23VTT domain-containing protein n=1 Tax=Litorimonas ... [more]
UPI00040E8AED6.540e-5546.67VTT domain-containing protein n=1 Tax=Hellea balne... [more]
A0A848V543_9PROT7.520e-4442.86TVP38/TMEM64 family membrane protein n=1 Tax=Helle... [more]
UPI000370F07D1.090e-4340.00VTT domain-containing protein n=1 Tax=Robiginitoma... [more]
A0A2G2GHZ0_9PROT3.660e-4344.15TVP38/TMEM64 family membrane protein n=1 Tax=Robig... [more]
A0A2G2GCX4_9PROT3.730e-4243.78TVP38/TMEM64 family membrane protein n=1 Tax=Robig... [more]
A0A328A9B8_9CAUL3.750e-4142.94TVP38/TMEM64 family membrane protein n=1 Tax=Pheny... [more]
A0A1G2WBX8_9CAUL8.470e-4138.34TVP38/TMEM64 family membrane protein n=3 Tax=uncla... [more]
B4RFD0_PHEZH9.070e-4043.35TVP38/TMEM64 family membrane protein n=1 Tax=Pheny... [more]
A0A0Q8MR46_9CAUL1.120e-3941.48TVP38/TMEM64 family membrane protein n=1 Tax=Pheny... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 65..178
e-value: 1.8E-24
score: 86.6
IPR015414Transmembrane protein TMEM64PANTHERPTHR12677UNCHARACTERIZEDcoord: 13..205
NoneNo IPR availablePANTHERPTHR12677:SF48TVP38/TMEM64 FAMILY INNER MEMBRANE PROTEIN YDJZcoord: 13..205
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..183
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 189..208
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 128..150
NoneNo IPR availableTMHMMTMhelixcoord: 7..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98420contigP-canaliculata_contig98420:355..1014 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98420.23943.1mRNA_P-canaliculata_contig98420.23943.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98420 355..1014 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98420.23943.1 ID=prot_P-canaliculata_contig98420.23943.1|Name=mRNA_P-canaliculata_contig98420.23943.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=220bp
ILTARALFWLIGSLLIPVLLVLAAKQIFNIDQAELFAALQALSESPWAIP
VTIALFCGLAFVGAPQWMLITGTVLAFGVWEGGILSWVGSLAAAALGFWI
GKTVGAERLRRLDAKLIRRISAAVRKNGFMTSLVVRLVPTGPAILVNLAA
GVSRMKFGHFVAGTGIGIIPKIIVVCLISQGLISGLSGSLMAVFFAGLAG
VAILFSWAARKRLEARSHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc
IPR015414TMEM64