prot_P-canaliculata_contig98286.23926.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98286.23926.1
Unique Nameprot_P-canaliculata_contig98286.23926.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length123
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98286.23926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.200.20coord: 5..115
e-value: 1.2E-14
score: 56.0
IPR032030YscD, cytoplasmic domainPFAMPF16697Yop-YscD_cplcoord: 15..97
e-value: 7.2E-10
score: 39.0
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 25..76
score: 7.056
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 14..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98286contigP-canaliculata_contig98286:433..801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98286.23926.1mRNA_P-canaliculata_contig98286.23926.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98286 433..801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98286.23926.1 ID=prot_P-canaliculata_contig98286.23926.1|Name=mRNA_P-canaliculata_contig98286.23926.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=123bp
MSAKVSYDDTSGRTQKLQLRAGQRLSIGASFSADIVLKNSQGVAGEHAEI
FFKHQKCSIRNLTGSPKKLLINGQPTKQAELANGDAIEIGSNQISFEMES
SEQSGILPATVAAPVAAVTVTLP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032030YscD_cytoplasmic_dom
IPR000253FHA_dom
IPR008984SMAD_FHA_dom_sf