prot_P-canaliculata_contig9806.23903.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9806.23903.1
Unique Nameprot_P-canaliculata_contig9806.23903.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length240
Homology
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BLAST of mRNA_P-canaliculata_contig9806.23903.1 vs. uniprot
Match: D7G778_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G778_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 8.880e-92
Identity = 146/239 (61.09%), Postives = 184/239 (76.99%), Query Frame = 0 
Query:    1 MGAATVTDTKFGTLTSTVSVDPQERSASVDATLYTEDYGTFSTSLKAKDKVKDKVDFLGPVRWTSKPLNFPFALKEPTPMVIGIVHDVKTKEGQLNFSAKLSNNFDGKVVLPSTGDPIATVIASHSPDKDSDIRASANVLDLLGSGVGKGSIGVSYRRDLDTVQVSDESLSRYPPSTVRQGSSSRVTLEGKDTGDFAWSLSNTTKRMTLVLSGRGRLRLRGEEEGISSTVALRSSFRVF 239
            + A++ TDT +G    TV+VDPQ+++A V+ ++  E+ G FST+LKA +K   +   LGP++WTS P++FPFAL+E TPMVI I HD+ TKEG L+ +AKL++NFDGK++LPS GDP+AT++ SHSPDK SDIRASANVLDL+GSG GKG+IGV+YRRDLD V                 GSSSRVTLEGKDTGDFAWSLSNT+KRMTLVLSGRGR+  RGE  G+ STV+LR SFR+F
Sbjct:   78 LSASSSTDTAYGKAFGTVTVDPQDKTAVVEGSIRNEELGMFSTTLKASEK---EGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVA----------------GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGTGVGSTVSLRQSFRMF 297
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9806.23903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G778_ECTSI8.880e-9261.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9806contigP-canaliculata_contig9806:7408..10046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9806.23903.1mRNA_P-canaliculata_contig9806.23903.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9806 6568..10136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9806.23903.1 ID=prot_P-canaliculata_contig9806.23903.1|Name=mRNA_P-canaliculata_contig9806.23903.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=240bp
MGAATVTDTKFGTLTSTVSVDPQERSASVDATLYTEDYGTFSTSLKAKDK
VKDKVDFLGPVRWTSKPLNFPFALKEPTPMVIGIVHDVKTKEGQLNFSAK
LSNNFDGKVVLPSTGDPIATVIASHSPDKDSDIRASANVLDLLGSGVGKG
SIGVSYRRDLDTVQVSDESLSRYPPSTVRQGSSSRVTLEGKDTGDFAWSL
SNTTKRMTLVLSGRGRLRLRGEEEGISSTVALRSSFRVF*
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