prot_P-canaliculata_contig973.23813.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig973.23813.1
Unique Nameprot_P-canaliculata_contig973.23813.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length242
Homology
BLAST of mRNA_P-canaliculata_contig973.23813.1 vs. uniprot
Match: D7FKL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL9_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 3.330e-39
Identity = 74/168 (44.05%), Postives = 100/168 (59.52%), Query Frame = 0
Query:   48 VECADACGGIGAG-FPAGASTVCDTTCSEGG-----RFGGYLCGAGDTVKFGPMCRLCFNDIKEARNAESRLMDGK--------HVIMCDTMRPPAAVDCSDECARETNTVCDEACGTGLHGDYGCNWKNLGAKCRSCFEDVEAVLKADEIAKRHGGRAIMCDTHEAP 201
            ++C  ACG   +G    G ST CD +C+ G      R GG+ CGAGD  +FG  CRLC+ D + A  A+ +L            HV+MCDT +PP A  C+  C   ++TVCD  CG+G +GD+ C+W+ LG+ CR CF ++ A   ADE AK HGGR +MC+THE P
Sbjct:  178 LDCTSACGSALSGKIGTGVSTFCDESCATGWSPAGPRLGGHDCGAGDPSQFGGTCRLCYTDEELALVADHKLASASANPSKPDMHVVMCDTTQPPPASSCTTACQDASDTVCDYRCGSGRYGDFNCDWRGLGSTCRLCFNELPAAHLADEFAKAHGGRVVMCNTHEPP 345          
BLAST of mRNA_P-canaliculata_contig973.23813.1 vs. uniprot
Match: D7FRS3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS3_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.130e-38
Identity = 80/185 (43.24%), Postives = 103/185 (55.68%), Query Frame = 0
Query:   48 VECADACGGI-GAGFPAGASTVCDTTCSEGG-----RFGGYLCGAGDTVKFGPMCRLCFNDIKEARNAESRLMD--------GKHVIMCDTMRPPAAVDCSDECARETNTVCDEACGTGLHGDYGCNWKNLGAKCRSCFEDVEAVLKADEIAKRHGGRAIMCDTHEAP-EVAMKG-ALVASTTHR 216
            + C  ACG    A    GAST CD +CS G      R GG+ CGAGD  ++G  CRLC+ +  EA  A+  L            HV+MCDT +PP A  C+  C    +TVCD  CG+G +GD+ CNW+ + + CR CF +    L ADE+AK HGGR +MC+THE P  +  K  A V  T HR
Sbjct:   92 LSCTGACGSEHSAQVRTGASTFCDESCSTGWSPAGPRLGGHNCGAGDPSQYGSTCRLCYTNEDEALAADRTLASLSTDPSTPDAHVVMCDTTQPPQASRCTTACQDMADTVCDYRCGSGRYGDFNCNWRGVDSTCRLCFHETSVALLADEVAKAHGGRVVMCNTHEPPLPIGSKTKATVEDTGHR 276          
BLAST of mRNA_P-canaliculata_contig973.23813.1 vs. uniprot
Match: A0A6H5KI77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI77_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.740e-32
Identity = 64/132 (48.48%), Postives = 76/132 (57.58%), Query Frame = 0
Query:   78 RFGGYLCGAGDTVKFGPMCRLCFNDIKEARNAESRL--------MDGKHVIMCDTMRPPAAVDCSDECARETNTVCDEACGTGLHGDYGCNWKNLGAKCRSCFEDVEAVLKADEIAKRHGGRAIMCDTHEAP 201
            RF G+ CGAGD   +G  CR C+ D +EA  A+  L        + G HVIMCDT  PP A  CS  C    +TVCD  CGTGL+GDY C+W  LG  CR CF++      AD IAK  G R I+C THE P
Sbjct:  125 RFRGHNCGAGDPSLYGSTCRSCYTDEEEALAADRSLGNASSDPLLAGAHVIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDYNCDWLGLGLTCRRCFQETSVAEFADSIAKTRGQRVILCATHEPP 256          
BLAST of mRNA_P-canaliculata_contig973.23813.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.750e-16
Identity = 52/141 (36.88%), Postives = 71/141 (50.35%), Query Frame = 0
Query:   66 STVCD-TTCSEG------GRFGGYLCGAGDTVKFGPMCRLCFNDIKEARNAESRLMDG---------KHVIMCDTMRPPAAVDCSDECARETNT------------------------VCDEACGTGLHGDYGCNWKNLGA 166
            +TVCD  TCS        G+ G + CGAGD  +FG  CR C+ D +EA  A+  L +          +HVIMCDT+RPP A  CS +CA + +T                        +CD+ C +GL G+Y CNW++ GA
Sbjct:  290 ATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRSCYFDAEEALKADRILQNQAREVGEVQPRHVIMCDTLRPPEASTCSLKCALKKDTARTNSSMRPPEPHVNPVWLYVPPQICDDRCESGLFGNYNCNWRDHGA 430          
BLAST of mRNA_P-canaliculata_contig973.23813.1 vs. uniprot
Match: A0A6H5KID1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KID1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 4.480e-14
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 0
Query:  144 VCDEACGTGLHGDYGCNWKNLGAKCRSCFEDVEAVLKADEIAKRHGGRAIMCDTHEAP 201
            VCD  CG+G +GD+ C+W+ LG+ CR CF ++ A   ADE AK H GR +MC+THE P
Sbjct:   25 VCDYRCGSGRYGDFNCDWRGLGSTCRLCFNELPAAHLADEFAKAHDGRVVMCNTHEPP 82          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig973.23813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FKL9_ECTSI3.330e-3944.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRS3_ECTSI1.130e-3843.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KI77_9PHAE1.740e-3248.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKY0_9PHAE2.750e-1636.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KID1_9PHAE4.480e-1453.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig973contigP-canaliculata_contig973:17216..19621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig973.23813.1mRNA_P-canaliculata_contig973.23813.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig973 16930..19679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig973.23813.1 ID=prot_P-canaliculata_contig973.23813.1|Name=mRNA_P-canaliculata_contig973.23813.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=242bp
MVSDEDDQGQLSEYDALAIMQWNVVVATDQFFEDLYKAAFHPTGEKEVEC
ADACGGIGAGFPAGASTVCDTTCSEGGRFGGYLCGAGDTVKFGPMCRLCF
NDIKEARNAESRLMDGKHVIMCDTMRPPAAVDCSDECARETNTVCDEACG
TGLHGDYGCNWKNLGAKCRSCFEDVEAVLKADEIAKRHGGRAIMCDTHEA
PEVAMKGALVASTTHRLRPSKEYQKWKTTEKLVGHENTEPK*
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