prot_P-canaliculata_contig95664.23584.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig95664.23584.1
Unique Nameprot_P-canaliculata_contig95664.23584.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length42
Homology
BLAST of mRNA_P-canaliculata_contig95664.23584.1 vs. uniprot
Match: D8LI40_ECTSI (A to I editase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI40_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 8.140e-10
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    4 LADNIATAVIKRFDTLKPRGKPQGREWTVLAGIVAED 40
            L D +A+AV+++FD LK RGKPQG+EWTVLAGIVA+D
Sbjct:    3 LGDRVASAVVEQFDNLKSRGKPQGKEWTVLAGIVAQD 39          
BLAST of mRNA_P-canaliculata_contig95664.23584.1 vs. uniprot
Match: A0A812L8R9_9DINO (TAD1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L8R9_9DINO)

HSP 1 Score: 56.6 bits (135), Expect = 2.610e-8
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    3 SLADNIATAVIKRFDTLKPRGKPQGREWTVLAGIVAE 39
            ++AD IA AV+ R+D L  RGKPQGR WTVLAGIVAE
Sbjct:   16 AIADRIAQAVLSRYDELPGRGKPQGRSWTVLAGIVAE 52          
BLAST of mRNA_P-canaliculata_contig95664.23584.1 vs. uniprot
Match: A0A813F0T6_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F0T6_POLGL)

HSP 1 Score: 54.7 bits (130), Expect = 6.920e-8
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    3 SLADNIATAVIKRFDTLKPRGKPQGREWTVLAGIVAE 39
            +L D +A AVI R+D L  RGKPQGR WTVLAGIVAE
Sbjct:   96 ALHDRVAQAVIGRYDELPGRGKPQGRSWTVLAGIVAE 132          
BLAST of mRNA_P-canaliculata_contig95664.23584.1 vs. uniprot
Match: A0A812Z9D5_9DINO (Adat1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Z9D5_9DINO)

HSP 1 Score: 55.5 bits (132), Expect = 8.900e-8
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    3 SLADNIATAVIKRFDTLKPRGKPQGREWTVLAGIVAE 39
            +++D IA AV+ R+D L  RGKPQGR WTVLAGIVAE
Sbjct:   19 TISDRIAQAVLSRYDELPGRGKPQGRSWTVLAGIVAE 55          
BLAST of mRNA_P-canaliculata_contig95664.23584.1 vs. uniprot
Match: A0A8J2A0D3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2A0D3_9DINO)

HSP 1 Score: 53.9 bits (128), Expect = 1.240e-7
Identity = 22/33 (66.67%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    5 ADNIATAVIKRFDTLKPRGKPQGREWTVLAGIV 37
            AD +AT VI++F++LK  GKPQG+EWTVLAG+V
Sbjct:   26 ADRVATCVIEKFESLKKHGKPQGKEWTVLAGVV 58          
BLAST of mRNA_P-canaliculata_contig95664.23584.1 vs. uniprot
Match: UPI000771C583 (tRNA-specific adenosine deaminase 1 isoform X1 n=2 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771C583)

HSP 1 Score: 47.0 bits (110), Expect = 8.780e-5
Identity = 19/41 (46.34%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    1 MTSLADNIATAVIKRFDTLKPRGKPQGREWTVLAGIVAEDV 41
            M S AD +A   ++++++LK  GKP   EWTVL+GIV E++
Sbjct:    1 MNSFADKVAKLCLQKYNSLKKTGKPTSNEWTVLSGIVLENI 41          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig95664.23584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LI40_ECTSI8.140e-1070.27A to I editase domain-containing protein n=2 Tax=E... [more]
A0A812L8R9_9DINO2.610e-870.27TAD1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A813F0T6_POLGL6.920e-870.27Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A812Z9D5_9DINO8.900e-867.57Adat1 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A8J2A0D3_9DINO1.240e-766.67Hypothetical protein (Fragment) n=1 Tax=Amoebophry... [more]
UPI000771C5838.780e-546.34tRNA-specific adenosine deaminase 1 isoform X1 n=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig95664contigP-canaliculata_contig95664:355..480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig95664.23584.1mRNA_P-canaliculata_contig95664.23584.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig95664 355..486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig95664.23584.1 ID=prot_P-canaliculata_contig95664.23584.1|Name=mRNA_P-canaliculata_contig95664.23584.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=42bp
MTSLADNIATAVIKRFDTLKPRGKPQGREWTVLAGIVAEDVV
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