prot_P-canaliculata_contig9349.23355.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9349.23355.1
Unique Nameprot_P-canaliculata_contig9349.23355.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length427
Homology
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BLAST of mRNA_P-canaliculata_contig9349.23355.1 vs. uniprot
Match: D8LL26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL26_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 8.000e-121
Identity = 189/308 (61.36%), Postives = 232/308 (75.32%), Query Frame = 0 
Query:   47 LQLDDLGVAAGKAAPGLLVYAHENETGSFGFDLGEGTDVDLLPAPDLEKLGD-SLRTPLSVLSFGHAVTAVKGWWADEFTFRGFGIGITKPIFRGMLLRPDVGLGIRLPLTLHFRSWERQVALPAISSSFFVLWPPAVQVSHAVSYPAELLQEWTTAAVRKIMVSSKEAAQARQRKETVQRVGFTVGVRYSATYGLQWWLSPYFFLLPGIRLISDLYESFMALLLSSMALNQRSNDSETGEKDGIDERESELSLWILALRNWAATKTSGLGYALYLSGNRLGGGIMINFMPFFLPTF--SVNRSSSGM 351
            LQL+      G A P      +E     F FDLG   DVDL PAPD+ + G    R PL +   G+A+TA KGWWA+EFTFRGFGIG  KP+FRG+LLRPD+G+G+RLP+TLHFRSWE + ALP+++ S FVLWPPAVQVS A+SYPAELLQE  T A RKI+V SKEA Q R+RKE VQR+G ++GVRYS+TYG QWWLSPYFFLLPG+R++  LY+S M LLLSS+AL QRS+ S    ++G    E++ +LW++ALR+WAA KTSGLGYALYLSGNRLGG   +NFMPFFLPTF  + +R SSG+
Sbjct:   13 LQLESPPDTTGIAFP---AGTYEFGAEDFRFDLGR-EDVDLFPAPDIYERGSYRARKPLKLPELGNALTACKGWWAEEFTFRGFGIGFVKPVFRGLLLRPDLGVGVRLPVTLHFRSWESREALPSVALSLFVLWPPAVQVSQAMSYPAELLQELATTAARKIVVPSKEAIQVRRRKEAVQRLGVSIGVRYSSTYGFQWWLSPYFFLLPGVRVLWTLYQSMMTLLLSSLALMQRSDASGLDRENG--RAENQEALWVVALRSWAAEKTSGLGYALYLSGNRLGGAAYVNFMPFFLPTFRAATSRDSSGV 314
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BLAST of mRNA_P-canaliculata_contig9349.23355.1 vs. uniprot
Match: A0A835Z8S6_9STRA (Peroxin/Ferlin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 6.820e-35
Identity = 88/219 (40.18%), Postives = 115/219 (52.51%), Query Frame = 0 
Query:  114 TAVKGWWADEFTFRGFGIGITKPIFRGMLLR---PDVGLGIRLPLTLHFRSWERQVALPAISSSFFVLWPPAVQVSHAVSYPAELLQEWT--------------TAAVR---KIMVSSKE-----AAQARQRKETVQRVGFTVGVRYSATYGLQWWLSPYFFLLPGIRLISDLYESFMALLLSSMALNQRSNDSETGEKDGIDERESELSLWILALRNW 307
            +A+  WW  EF FRGFG+G+ KP+F G +LR    D+G+G+R+P+T HF  WE +  LP ISSS F  WP  VQ S  +S  +  LQ+W               TA  R   KI +S        A +  QR+ TV RVG TV VR SA YGLQ W SPY FLLPG+R+I+D   S +AL+L +             E   +      ++LW    R W
Sbjct:  309 SALAQWWEREFVFRGFGVGLVKPLFAGYMLRGNLSDMGVGLRMPITSHFNCWEARRDLPLISSSLFFFWPLKVQTSFTMSVASAQLQDWAGGVKGLWLALADSFTAEGRRRAKIWLSGSGEGGAFAKKPVQRRTTVTRVGVTVSVRLSAEYGLQVWASPYIFLLPGVRIITDALSSALALILGTRDTAAAVEARRAQEAARLASATYAVALWASLCRCW 527
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9349.23355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL26_ECTSI8.000e-12161.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z8S6_9STRA6.820e-3540.18Peroxin/Ferlin domain-containing protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 399..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9349contigP-canaliculata_contig9349:811..3401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9349.23355.1mRNA_P-canaliculata_contig9349.23355.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9349 692..4471 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9349.23355.1 ID=prot_P-canaliculata_contig9349.23355.1|Name=mRNA_P-canaliculata_contig9349.23355.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=427bp
MKEMDNFSSPRAPRGKRLTDRYRRRRWIRAMGPQRGSLQQETNRVSLQLD
DLGVAAGKAAPGLLVYAHENETGSFGFDLGEGTDVDLLPAPDLEKLGDSL
RTPLSVLSFGHAVTAVKGWWADEFTFRGFGIGITKPIFRGMLLRPDVGLG
IRLPLTLHFRSWERQVALPAISSSFFVLWPPAVQVSHAVSYPAELLQEWT
TAAVRKIMVSSKEAAQARQRKETVQRVGFTVGVRYSATYGLQWWLSPYFF
LLPGIRLISDLYESFMALLLSSMALNQRSNDSETGEKDGIDERESELSLW
ILALRNWAATKTSGLGYALYLSGNRLGGGIMINFMPFFLPTFSVNRSSSG
MVHEIDGDAKAEDGKDEGDLTRTLEPETDLVSSTSIGGAPSSTVNVEAFD
EAEADLDTTERERQRQEGEVLTTCAA*
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