prot_P-canaliculata_contig93204.23331.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93204.23331.1
Unique Nameprot_P-canaliculata_contig93204.23331.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length79
Homology
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A6H5L4J3_9PHAE (RED_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J3_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 4.440e-34
Identity = 65/78 (83.33%), Postives = 71/78 (91.03%), Query Frame = 0
Query:    1 RGKLIITNDAEDSNKYRDRAEERRKGHNPDYADKLNQMATMDAETTKYLGGDIEHTHLVKGLDYALLVKIREEERHRQ 78
            RGKLI+ +   D NKYRDRA+ERRKG NPDYADKLNQMA+MDAETTKYLGGD+EHTHLVKGLDYALLVKIREEER +Q
Sbjct:   92 RGKLIVASGVNDPNKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQ 169          
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A4D9CVF8_9STRA (RED_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVF8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.360e-19
Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    6 ITNDAEDSNKYRDRAEERRKGHNPDYADKLNQMATMDAETTKYLGGDIEHTHLVKGLDYALLVKIR 71
            +   A +   YRDRAEERRKG NPDY D++ ++  MDAETTKYLGGD++HTHLVKGLDYALL ++R
Sbjct:  140 VAGGASEEGGYRDRAEERRKGVNPDYEDEIARLVHMDAETTKYLGGDVKHTHLVKGLDYALLQRVR 205          
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A7S3XKR5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKR5_HETAK)

HSP 1 Score: 86.7 bits (213), Expect = 2.500e-18
Identity = 40/63 (63.49%), Postives = 52/63 (82.54%), Query Frame = 0
Query:   11 EDSNKYRDRAEERRKGHNPDYADKLNQMATMDAETTKYLGGDIEHTHLVKGLDYALLVKIREE 73
            E++  YRDRA ERR+G+NPDY D + +M  MD E +KYLGGD++HTHLV+GLDYALL K+R+E
Sbjct:  109 EENQGYRDRAAERRQGYNPDYDDDIEKMVQMDVEKSKYLGGDVKHTHLVRGLDYALLNKVRQE 171          
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A7R9Z3L9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9Z3L9_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 1.280e-16
Identity = 45/74 (60.81%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    8 NDAEDSNKYRDRAEERRKGHNPDYADKLNQMAT----------MDAETTKYLGGDIEHTHLVKGLDYALLVKIR 71
            N+ +D  KYRDRAEERR+G NPDYA   NQ+A           +  E TKYLGGDIEHTHLVKGLD+ALL K R
Sbjct:   65 NEEDDGPKYRDRAEERRRGINPDYAS-ANQLAAALPGDVDMNALSVEETKYLGGDIEHTHLVKGLDFALLQKER 137          
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A7S2W4J1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4J1_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.200e-16
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query:   15 KYRDRAEERRKGHNPDYADKLNQMATMDAETTKYLGGDIEHTHLVKGLDYALLVKIREE 73
            KYRDRA ERRK  NPDY   + ++  +D E +KYLGGD+EHTHLVKGLDYALL K+R+E
Sbjct:   71 KYRDRANERRKEINPDYKTDVQKLLEVDIEKSKYLGGDVEHTHLVKGLDYALLSKVRDE 129          
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A1Y1YJX7_9FUNG (RED_N domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YJX7_9FUNG)

HSP 1 Score: 81.3 bits (199), Expect = 3.370e-16
Identity = 44/77 (57.14%), Postives = 52/77 (67.53%), Query Frame = 0
Query:   11 EDSNKYRDRAEERRKGHNPDYADKLNQMATMDA--------ETTKYLGGDIEHTHLVKGLDYALLVKIREEERHRQT 79
            EDS KYRDRA ERR+G NPDY +    +AT+          E +KYLGGD EHTHLVKGLDYALL K+R E+   +T
Sbjct:   90 EDSEKYRDRARERRRGENPDYVETERILATLQTPEDPNLAYEKSKYLGGDAEHTHLVKGLDYALLEKVRREKMANET 166          
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A812YWK0_SYMMI (SMU2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YWK0_SYMMI)

HSP 1 Score: 79.3 bits (194), Expect = 1.150e-15
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
Query:   16 YRDRAEERRKGHNPDYADKLNQMATMDAETTKYLGGDIEHTHLVKGLDYALLVKIR 71
            YRDRA+ERR   NPDY  +L  +A +D E TKYLGGD EHTHLVKGLDYALL K+R
Sbjct:   73 YRDRAQERRNDANPDYDAQLEAVANLDVEQTKYLGGDEEHTHLVKGLDYALLRKVR 128          
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A397GNT5_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GNT5_9GLOM)

HSP 1 Score: 79.7 bits (195), Expect = 1.220e-15
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    1 RGKLIITNDAEDS-NKYRDRAEERRKGHNPDYADKLNQMATMDAET---------TKYLGGDIEHTHLVKGLDYALLVKIREE 73
            R + + T+DAE + NKYRDRA ERRKG NPDY +    +  +++ET         +KYLGGD EHTHLVKGLDYALL K+R E
Sbjct:   74 RFRKLETSDAETTDNKYRDRAAERRKGANPDYQETEQILKALNSETLEAKLIYEQSKYLGGDTEHTHLVKGLDYALLAKVRNE 156          
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A7R9YBH1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBH1_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 3.120e-15
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 0
Query:   16 YRDRAEERRKGHNPDYADKLNQMAT--MDAETTKYLGGDIEHTHLVKGLDYALLVKIR 71
            YRDRA ERR G NPDYA +L  +A   +DA  TKYLGGD+EHTHLVKGLD+ALL K+R
Sbjct:  113 YRDRAAERRAGLNPDYAGELEDLAAKKVDASMTKYLGGDVEHTHLVKGLDFALLHKVR 170          
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Match: A0A7S0W5K0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W5K0_9CRYP)

HSP 1 Score: 72.8 bits (177), Expect = 7.190e-15
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 0
Query:   11 EDSNKYRDRAEERRKGHNPDYADKLNQMATMDAETTKYLGGDIEHTHLVKGLDYALLVKIREE 73
            E++N+Y+DRA+ERR G + +YA   + +  +  E +KYLGGD+EHTHLVKGLD+ALL KIR E
Sbjct:   24 ENTNEYKDRAKERRLGTSSEYAISEDAVKDLSVEESKYLGGDMEHTHLVKGLDFALLAKIRSE 86          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93204.23331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4J3_9PHAE4.440e-3483.33RED_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A4D9CVF8_9STRA1.360e-1965.15RED_N domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S3XKR5_HETAK2.500e-1863.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9Z3L9_9CHLO1.280e-1660.81Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A7S2W4J1_9STRA3.200e-1666.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Y1YJX7_9FUNG3.370e-1657.14RED_N domain-containing protein n=1 Tax=Basidiobol... [more]
A0A812YWK0_SYMMI1.150e-1569.64SMU2 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A397GNT5_9GLOM1.220e-1555.42Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A7R9YBH1_9STRA3.120e-1568.97Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0W5K0_9CRYP7.190e-1557.14Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012916RED-like, N-terminalPFAMPF07808RED_Ncoord: 8..39
e-value: 5.2E-6
score: 26.2
coord: 41..76
e-value: 1.1E-14
score: 54.7
IPR039896Protein Red-likePANTHERPTHR12765RED PROTEIN IK FACTOR CYTOKINE IKcoord: 9..76
NoneNo IPR availablePANTHERPTHR12765:SF5PROTEIN REDcoord: 9..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93204contigP-canaliculata_contig93204:568..804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93204.23331.1mRNA_P-canaliculata_contig93204.23331.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93204 568..804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93204.23331.1 ID=prot_P-canaliculata_contig93204.23331.1|Name=mRNA_P-canaliculata_contig93204.23331.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=79bp
RGKLIITNDAEDSNKYRDRAEERRKGHNPDYADKLNQMATMDAETTKYLG
GDIEHTHLVKGLDYALLVKIREEERHRQT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012916RED_N
IPR039896Red-like