prot_P-canaliculata_contig9284.23280.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9284.23280.1
Unique Nameprot_P-canaliculata_contig9284.23280.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length366
Homology
BLAST of mRNA_P-canaliculata_contig9284.23280.1 vs. uniprot
Match: D8LL70_ECTSI (DUF4524 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL70_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 7.130e-54
Identity = 167/441 (37.87%), Postives = 201/441 (45.58%), Query Frame = 0
Query:    3 PTRLLLYENGASLGVFPPALGGIDHEVTLP------SLIVMEPEGACFTHIHQDGTCYRLLTDFCRRDLLPQLAAVANFRNAHSSRPYLSRRLHVDKGFQGIS----------------TPPPSRRLSRLALWPE------RPPSAGNSKRCTVH-ADGRVEVRAAGGNARLVLSSSRNVCEVDFAAQAPATSSFLSEKLRDGDEEEGDWCGGGPGDDGATGCEQRGRRGAYAGRVWVNRQFLVG-RAAPP----PAEFAHALGVALS-----------------------------------AFPARGGEEDGGNPPSAVGDEEVVASKLPVPLGRPDRARWDTVQTSQTFGSSPDAW-PSAFDHHR--------LLGERTDVAYSSATSSGGSPANVTPEHRLLAADAMKLAEGTGFAGPLAAVVESFAGCIYRVVDDG 365
            P R LL+ENGA+L VF       DH           S +V+EP GACF  + QDGTC+R L+DFCRRDL+P +AAV++FRNAHS RPYLS+R+H     +  S                TP      SR+A WP       R  ++ +S    V  ADG VEVRAAGGNARL LS+S  V EVD+A   P                       GPG              A  GRVWV R+FLVG  AAPP    P EF+HAL VA+                                    A  A GG   G       G+  +VA +LP P  RPD A WDTVQ   +  S  D   P  +   R            R   A +SA ++GG         RLL+ D MKLA G G+AG LAAVVES   C YR+V  G
Sbjct:    4 PRRCLLFENGAALAVFG---DDGDHHTRQSGDERGNSAVVLEPSGACFAEVRQDGTCHRQLSDFCRRDLIPHVAAVSSFRNAHSPRPYLSQRIHATLEQETHSSNGTXXXXXXXXXXXXTP------SRIAHWPAAAEPTCRHSTSNSSSTFVVRGADGSVEVRAAGGNARLALSASGTVAEVDYAVALPP----------------------GPG-------------AAGGGRVWVTRRFLVGGSAAPPFDDVPPEFSHALSVAVRESRSAXXXXXXXXXXXXXXXXXXXXGDVSLGRVSPAAAAAGGTVSGKG-----GERGLVAVELPRPEERPDHASWDTVQQGPSLDSHRDPLAPLGYYGDRRWCDGAAPTFATRAATASASAAAAGG---------RLLSVDVMKLAGGQGYAGELAAVVESTGCCTYRIVVGG 386          
BLAST of mRNA_P-canaliculata_contig9284.23280.1 vs. uniprot
Match: A0A6H5KVD6_9PHAE (DUF4524 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD6_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 6.450e-49
Identity = 167/468 (35.68%), Postives = 206/468 (44.02%), Query Frame = 0
Query:    3 PTRLLLYENGASLGVFPPALGGIDHEVTLPS-------LIVMEPEGACFTHIHQDGTCYRLLTDFCRRDLLPQLAAVANFRNAHSSRPYLSRRLH--VDKGFQGISTPPPSRRL--------SRLALWPERPPSAGN-------SKRCTVHADGRVEVRAAGGNARLVLSSSRNVCEVDFAAQAPATSS-----------------------------------FLSEKLRDGDEEEGDWCGGGPGDDGATGCEQRGRRGAYAG----------RVWVNRQFLVGRAAPPP-----AEFAHALGVAL-----SAFPARGGEEDGGN--------------PPSAV------------GDEEVVASKLPVPLGRPDRARWDTVQTSQTFGSSPDAW-PSAF--DHHRLLGERTDVAYSSATSSGGSPANVTPEHRLLAADAMKLAEGTGFAGPLAAVVESFAGCIYRVV 362
            P R LL+ENGA+L VF     G  H  T  S        +V+EP GACFT + QDGTC+R L+DFCRRDL+P +AA ++FRNAHS RPYLS+R+H  +++G    S                SR+A WP               S      ADGRVEVRAAGGNARL LS+S  V EVD+A   P                                               G ++E       PG         R  R    G          RVWV R+FLVGR+A PP      EF+HAL VA+     +A  A    E G N              P +A             G+  +VA +LP+P  RPD A WDT+    +  S  D   P  +  D  R        A  SAT S  + A      RLL+ D M+LAEG G+AG LA VVES  GC YR+V
Sbjct:   22 PLRYLLFENGAALAVFGDR--GDYHTSTRQSRNERGNSAVVLEPSGACFTQVRQDGTCHRQLSDFCRRDLIPHVAAASSFRNAHSPRPYLSQRIHATLEQGPHNSSXXXXXXXXXXXXXXXPSRIAHWPAAAEPXXXXXXXXXXSTFVVRGADGRVEVRAAGGNARLTLSASGTVAEVDYAVALPPGPGAAXXXXXXXXXXXXXXXXXXXXWREGXXXXXXXXXXXXXXXXXGQQQEN------PGAAEGRVAANRSSRVDGEGFGXXXXXXSRRVWVTRRFLVGRSAAPPFDDVPPEFSHALSVAVRESQSAAATAAAAVETGRNSVGGGGDFSLGRVGPAAAAVAAAGGTVSRKGGEGGLVAVELPLPEERPDHASWDTLHQGPSLDSHRDPLAPLGYYGDRRRCDSAAPTFAARSATGSASAAA---AGGRLLSVDVMELAEGQGYAGELAIVVESTGGCTYRIV 478          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9284.23280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL70_ECTSI7.130e-5437.87DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KVD6_9PHAE6.450e-4935.68DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027830Domain of unknown function DUF4524PFAMPF15025DUF4524coord: 33..161
e-value: 4.3E-24
score: 84.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9284contigP-canaliculata_contig9284:4328..11402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9284.23280.1mRNA_P-canaliculata_contig9284.23280.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9284 4328..11532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9284.23280.1 ID=prot_P-canaliculata_contig9284.23280.1|Name=mRNA_P-canaliculata_contig9284.23280.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=366bp
MGPTRLLLYENGASLGVFPPALGGIDHEVTLPSLIVMEPEGACFTHIHQD
GTCYRLLTDFCRRDLLPQLAAVANFRNAHSSRPYLSRRLHVDKGFQGIST
PPPSRRLSRLALWPERPPSAGNSKRCTVHADGRVEVRAAGGNARLVLSSS
RNVCEVDFAAQAPATSSFLSEKLRDGDEEEGDWCGGGPGDDGATGCEQRG
RRGAYAGRVWVNRQFLVGRAAPPPAEFAHALGVALSAFPARGGEEDGGNP
PSAVGDEEVVASKLPVPLGRPDRARWDTVQTSQTFGSSPDAWPSAFDHHR
LLGERTDVAYSSATSSGGSPANVTPEHRLLAADAMKLAEGTGFAGPLAAV
VESFAGCIYRVVDDGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027830DUF4524