prot_P-canaliculata_contig92487.23235.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig92487.23235.1
Unique Nameprot_P-canaliculata_contig92487.23235.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length233
Homology
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: UPI00165541A0 (T9SS type A sorting domain-containing protein n=1 Tax=Kordia aestuariivivens TaxID=2759037 RepID=UPI00165541A0)

HSP 1 Score: 79.3 bits (194), Expect = 2.420e-13
Identity = 69/220 (31.36%), Postives = 96/220 (43.64%), Query Frame = 0
Query:   16 FAVDADGDGDLDVLQEEAFPPTTRVWLIENSGIGNQFPRRIVVDLAQGLRRAVPIDVDSDGLPDLVTQDDTIAGPGVRLNLGG-GNFGPPARLSTSFPTDFI-VTDVVDFNADGRVDLLVRSSGSSGSLRWVEKL-GPLDFAPSRVL---ADGFLSPRLDDLDGDGLLDVIAGNS-------YRLQTSPGILGSFERIAPGLPAPRPDGLADFDGDGDLD 222
            FA+D DGDGD+DVL   ++      W     G G   P++I+   A         D+D DG  D+V+   TI+      N  G GNFG  AR + ++  DF       D + DG +D+L  SSG    + W E   G  +F   +V+   AD   S    DLDGDG +DV++ +        Y      G  G+ + I             D D DGD D
Sbjct:  450 FAIDLDGDGDIDVLSA-SYDDNKIAWYENTDGQGTFGPQQIITTGASNAESVYAADLDGDGDMDIVSTYSTISSVVWFENTDGQGNFG--ARQTITYNADFAQAVYAEDIDGDGDMDILSASSGDD-KIAWYENTDGQGNFGTQQVISTNADSASSVYAIDLDGDGDIDVLSASRADDKIAWYENTDGQGTFGAQQIITTDADFATSVYAIDMDNDGDND 665          
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: I3YSM9_AEQSU (Por_Secre_tail domain-containing protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) TaxID=746697 RepID=I3YSM9_AEQSU)

HSP 1 Score: 70.1 bits (170), Expect = 2.590e-10
Identity = 77/242 (31.82%), Postives = 110/242 (45.45%), Query Frame = 0
Query:    6 VISSALQGQP--FAVDADGDGDLDVLQEEAFPPTTRVWLIENSGIGNQFPRRIVVDLAQGLRRAVPIDVDSDGLPDLVTQ---DDTIAGPGVRLNLGGGNFGPPARLSTS-FPTDFIVTDVVDFNADGRVDLLVRSSGSSGSLRWVEKLGPL-DFAPSRVL---ADGFLSPRLDDLDGDGLLDVIA-----GNSYRLQTSPGILGSF--ERIAPGL-PAPRPDGLADFDGDGDLDAWVSVLG 229
            +I+S LQ      AVD D    +DV+     P    VW     G+G    +R++   A G       D+D DG  D+++    D+ IA        G G FGP   L+ S   T  +  +  D + DG +D++  S+     + W E L  L  F P +V+   A+G +S R  D+DGDG  DVIA     G     +   G LG+F  E+I   L P  R   + D D DGDLD   ++ G
Sbjct:   75 IITSNLQETTTVIAVDIDXXXXMDVVAVSG-PQDKVVWFENLDGLGTFGTQRLITSAADGAIGLHASDIDGDGDFDILSASFLDNKIAW--YENTDGLGVFGPQKLLTNSALSTRDVYAE--DLDGDGDMDVIAASTADDRVI-WFENLDGLGSFGPLKVINNNANGVISVRAADIDGDGDKDVIAAIFGDGKIVWYENMDG-LGNFGIEKIVTTLSPTVRLVQVGDIDKDGDLDITAAIPG 309          
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: A0A110B0M0_9SPHI (Ycf48-like protein n=2 Tax=Mucilaginibacter gotjawali TaxID=1550579 RepID=A0A110B0M0_9SPHI)

HSP 1 Score: 67.8 bits (164), Expect = 2.210e-9
Identity = 68/227 (29.96%), Postives = 99/227 (43.61%), Query Frame = 0
Query:   15 PFAVDADGDGDLDVLQEEAFPPTTRVWLIENSGIGNQFPRRIVVDLAQGLRRAVPIDVDSDGLPDLVTQDDTIAGPGVRLNL---GGGNFGPPARLS-TSFPTDFIVTDVVDFNADGRVDLLVRSSGSSGSL---RWVEKLGPLDFAPSRVLADGFLSPRLDDLDGDGLLDVIA--GNS------YRLQTSPGILGSFERIAPGLPA-PRPDGLADFDGDGDLDAWV 225
            P   D DGDG  D+L   +         +     GN    +  +D       A+  D+D DGLP+L+T D+T     +  N+   G   FG     + TSF T  +     D + DG+ D++V +S     +   R   + G L F  +  L     S  + D DGDG  D++A  GN+       R  ++PG   SF+R+    PA P P    D DGDG LD  +
Sbjct:  934 PIVADIDGDGKPDILTRNSTGINGFSVQLNTGTPGNFSYTQQNIDGMNAYAFALA-DLDGDGLPELLTTDNTTNNVVIYHNISTPGHVAFGDTFSFTPTSFSTFSMAIAAADLDGDGKPDIVVTNSNGLNEIDLYRNTSQPGKLSFDTAFPLGGTADSFTIADFDGDGKPDLLATFGNNSNGIDMLRNTSTPGNF-SFDRVPDVFPANPYPICAGDIDGDGKLDVII 1158          
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: A0A2U0I213_9FLAO (Por_Secre_tail domain-containing protein n=1 Tax=Marixanthomonas spongiae TaxID=2174845 RepID=A0A2U0I213_9FLAO)

HSP 1 Score: 67.4 bits (163), Expect = 2.630e-9
Identity = 62/222 (27.93%), Postives = 97/222 (43.69%), Query Frame = 0
Query:   16 FAVDADGDGDLDVLQEE-AFPPTTRVWLIENSGIGNQFPRRIVVDLAQGLRRAVPIDVDSDGLPDLVTQ---DDTIAGPGVRLNLGGGNFGPPARLSTSFPTDFIVTDVVDFNADGRVDLLVRSSGSSGSLRWVEKLGPL-DFAPSRVL---ADGFLSPRLDDLDGDGLLDVIAGNS-------YRLQTSPGILGSFERIAPGLPAPRPDGLADFDGDGDLD 222
            +AVD DGD DLDV+    +F     +W     G+GN     ++ + A G +    ID+D+DG  D+++    D+ +A        G G+F    ++ +S   +       D + DG VD++  +      + W E    L +F P + +   ADG  S   DDLDGDG LDV++ +        Y+     G  G    I            AD +GD  +D
Sbjct:  503 YAVDIDGDNDLDVVASYYSFITGKVIWYENLDGLGNFGGPNLITNEASGAKSVFAIDIDNDGDIDILSASLLDNKVAW--YENTDGLGSFSNQ-KIISSVANEASSVSAADLDNDGDVDVMA-ALFEDDEIVWYENTDGLGNFGPPKTITTNADGASSVYADDLDGDGYLDVMSASRNDSKVAYYKNTDGQGNFGPQRIITTDRYGANSVFAADINGDNKMD 720          
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: UPI001F2679FD (FG-GAP-like repeat-containing protein n=2 Tax=Flavobacterium TaxID=237 RepID=UPI001F2679FD)

HSP 1 Score: 66.6 bits (161), Expect = 5.020e-9
Identity = 67/223 (30.04%), Postives = 98/223 (43.95%), Query Frame = 0
Query:   19 DADGDGDLDVLQEEAFPPTTRVWLIENSGIGNQFPRRIVVDLAQGLRRAVPI-DVDSDGLPDLVTQ---DDTIAGPGVRLNLGGGNFGPPARLSTSFPTDFIVTDVVDFNADGRVDLLVRSSGSSGSLRWVEKLGPLDFAPSRVL----ADGFLSPRLDDLDGDGLLDVIAGNSYR-----LQTSPGILGSFER--IAPGLPAPRPDGLADFDGDGDLDAWVS 226
            D DGDGDLD+L    F      W  EN G  +    RIV+  A      + I D++ DG  D+ +    DDTI+      N GG +     R+ ++   +       D + DG  D+   SS    S+ W E  G  +   ++++    ADG     +DD+DGDG LD+ A ++Y       +    I  SF    I           + D DGDGDLD +V+
Sbjct:  255 DMDGDGDLDILSASLFDDVV-AWY-ENDGAADPTFTRIVITTATNGAYTLTIGDMEGDGDLDIFSTSRYDDTIS---WFENDGGIDPTFTERIISTSVNNATDISFGDLDGDGDYDIAA-SSRDDDSIFWFENNGGSNPTFTKIVLTNAADGARRVSIDDIDGDGDLDIFAVSNYDDTVSWFENDGAIAPSFTEQIITKTADGANSISVGDVDGDGDLDIFVA 471          
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: A0A562C7Q6_9GAMM (VCBS repeat protein n=1 Tax=Luteimonas sp. J16 TaxID=935283 RepID=A0A562C7Q6_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 7.190e-9
Identity = 75/245 (30.61%), Postives = 106/245 (43.27%), Query Frame = 0
Query:   17 AVDADGDGDLDVLQEEAFPPTTRV----WLIENSGIGNQFPRRIVVDLAQGLRRAVPIDVDSDGLPDLVT----QDDTIAGPGVRLNLGGGNFGPPARLSTSFPTDFIVTDV--VDFNADGRVDLLVRSSGSSG---------SLRWVEKLGPLDFAPSRV-LADGFLSPRLDDLDGDGLLDVIAGNSYRLQTSPG--ILGSFER------IAPGLPAPRPDGL-----ADFDGDGDLDAWVSVL 228
            A D DGDGD+D+    A   T  +    W+    G      RR +V LA G     P+D+D DGL DLVT    + + +       NLGGG F          P  F  T +  VD + DG +DLL  +  +            ++W+E LG ++FA   +    G ++  + D+DGDG LD++A +       P    L  +E        A G+ A  P GL     AD +GDG LD      
Sbjct:    6 AADLDGDGDMDLAV--AVFGTNNIGAIFWMENRDGA---MYRRPLVPLA-GALGIEPVDLDGDGLLDLVTLVSQEHEMVL---AFRNLGGGRFEQVELARAPHPM-FGSTSLRAVDLDRDGDIDLLFTNGDAFDLQTDPKPYHGVQWLENLGNMEFAAHDIGRFYGAVATAVGDIDGDGDLDIVASSWVNYWRDPARHTLVWYENDGHQNFTAHGI-ASEPAGLTSLWLADANGDGRLDILAGAF 239          
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: A0A813D458_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D458_POLGL)

HSP 1 Score: 64.7 bits (156), Expect = 2.300e-8
Identity = 73/252 (28.97%), Postives = 104/252 (41.27%), Query Frame = 0
Query:   15 PFAVDADGDGDLDVLQEEA------FPPTTRVWLIENSGIGNQFPRRIVVDLAQGLRRAVPIDVDSDGLPDLVTQDDTIAGPG---VRLNLGGGNFGPPARLSTSFPTDFI------VTDVVDFNADGRVDLLVRSSGSSGSLRWVEKLGPLDFAPSRVLADGF----------LSPRLDDLDGDGLLDVIAGNSYRLQTSPGILGSFERIAPGLPAPRPDG----------------LADFDGDGDLDAWV 225
            PFAVD DGDGD+D+L   +      F  T +  LIE +G  N F     +D+      A P  VD DG  D    DD + G     +R      +     R  +S P D I      +   VD++ DG +DLL  +S S G +++ E+   +        ++ F          ++P   D DGDG +D++ GN        G +  FER A   P  RP                    D+DGD D+D  V
Sbjct:  260 PFAVDWDGDGDIDLLAGNSDGRIQFFERTAKASLIERTGSSNPFDG---IDVGWN---AAPCAVDWDGDGD----DDLLVGNQEGRIRFFERTADAKLVERTGSSNPFDGINARDNALPFAVDWDGDGDIDLL--ASNSDGRIQFFERSADVSLIEQTGNSNPFDGINGNVGWNVAPCAVDWDGDGDIDLLVGNWD------GRIFFFERTADASPVERPGSSNPFVSIDFGTRARPFAVDWDGDSDIDLIV 493          
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: A0A0L0DIU0_THETB (Beta_helix domain-containing protein n=2 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIU0_THETB)

HSP 1 Score: 64.3 bits (155), Expect = 3.290e-8
Identity = 63/200 (31.50%), Postives = 88/200 (44.00%), Query Frame = 0
Query:   42 LIENSGIGNQFPRRIVVDLAQGLRRAVPIDVDSDGLPDLVTQ---DDTIAGPGVRLNLGGGNFGPPARLSTSFPTDFIVTDVVDFNADGRVDLLVRSSGSSGSLRWVEKL-GPLDFAPSRVL---ADGFLSPRLDDLDGDGLLDVIAGNS-------YRLQTSPGILGSFERIAPGLPAPRPDGLADFDGDGDLD-AWVS 226
            L  N+  G Q   ++V   A  ++     D D DG  DL +    DDTIA          G+FGPP  LS +   D       D + DG  DL+    G +  + W E + G   F P +V+   A+G  S    D+DGDG LD+++ +        Y      G  G  + ++    A R    AD DGDGD+D AW S
Sbjct:  125 LYGNATFGQQ---QVVTTAAGTVQSVTAADFDGDGDIDLASASYLDDTIAW--YENTDRAGSFGPPQVLS-ALTNDAYSVIAADIDGDGDPDLVSPLFGQN-KIAWYENIDGAGIFGPQQVVSTAANGVRSVTAADMDGDGDLDLVSASELDDKIAWYENTNGTGSFGPQQVVSTVARAARSVIAADVDGDGDMDLAWAS 317          
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: UPI001C561DB4 (FG-GAP-like repeat-containing protein n=1 Tax=Prochlorococcus marinus TaxID=1219 RepID=UPI001C561DB4)

HSP 1 Score: 64.3 bits (155), Expect = 3.420e-8
Identity = 72/227 (31.72%), Postives = 98/227 (43.17%), Query Frame = 0
Query:   16 FAVDADGDGDLDVLQEEAFPPTTRVWLIENSGIGNQFPRRIVVDLA---QGLRRAVPIDVDSDGLPDLVTQ---DDTIAGPGVRLNLGGGNFGPPAR---LSTSFPTDFIVTDVVDFNADGRVDLLVRSSGSSGSLRWVEKLGPLD----FAPSRVLADGFLSPRLDDLDGDGLLDVIAG----NSYRLQTSPGILG---SFERIAPGLPAPRPDGLADFDGDGDLD 222
            F  D DGDGDLD++       T   W  EN G  +  P     D+A   QG  +    D+DSDG  D+V+    D TIA      N G  +    A     S SF TD     V D + DG +D+ V +S +  ++ W E  G  D     A     AD   +  +DDLDGDG LD+++     N+     + G +    +   IA          + D D DGDLD
Sbjct: 2477 FIADMDGDGDLDIVSASELDNTI-AWY-ENDGAAD--PTWTAADIATSAQGASQVYVADMDSDGDLDIVSSSKSDHTIA---WYENNGAADPAWTAADIATSASFATD---VHVADMDGDGDMDI-VSASYNDDTIAWYENNGAADPAWTAADIATDADYAQAVYVDDLDGDGDLDIVSASMIDNTIAWYENNGAVDPTWTAANIATNAEGAMDVYIGDLDHDGDLD 2692          
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Match: A0A259TWV2_9BACT (FlgD_ig domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TWV2_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 5.110e-8
Identity = 82/263 (31.18%), Postives = 110/263 (41.83%), Query Frame = 0
Query:   19 DADGDGDLDV-------LQEEAFPPTTRVWLIENSGIGNQ-----FPRRIVVDLAQGLRRAVPI--DVDSDGLPDLVTQDDTIAGPGVRLNLGGGNFGPPARLSTSFPTDFIVTDVV---------DFNADGRVDLLVRSSGSSGSLRWVEKLGPLDFAPSRVLADG---------FLSPRLDDLDGDGLLDVIAGNS------YRLQTSPGILGSFERIAPGLPAP-----RPD-GL------------ADFDGDGDLDAWV 225
            D DGDGDLD+       L   +  PT  +    N+G            R++  +  G RR+VP   D+D DG  D++  D       + L    G  G P R + + P D++  D           D +ADG +DLLV   G +G L ++E  G    AP   L D          +  P L D+DGDG LD++ G S      YR   +P    SF   + G P P     R D GL            AD DGDGDLD  +
Sbjct:  311 DTDGDGDLDLVVGVLGGLCVTSRTPTQNIVSFLNTGTPEDPAFEIQTTRLLRSIDHG-RRSVPAFADIDGDGDLDMIVGDGN-TDANLTLYTNTGTSGAP-RFALTDP-DWLALDYDFGGYAPTFGDLDADGDLDLLV--GGFNGRLAFLENTGTAT-APVYELRDERYAGIDAGQYAKPDLADIDGDGDLDLLVGESNGRVFLYRNAGTPEA-ASFATASNGTPGPADLAFRDDLGLTDDVGQESAPSAADLDGDGDLDILI 565          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig92487.23235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00165541A02.420e-1331.36T9SS type A sorting domain-containing protein n=1 ... [more]
I3YSM9_AEQSU2.590e-1031.82Por_Secre_tail domain-containing protein n=1 Tax=A... [more]
A0A110B0M0_9SPHI2.210e-929.96Ycf48-like protein n=2 Tax=Mucilaginibacter gotjaw... [more]
A0A2U0I213_9FLAO2.630e-927.93Por_Secre_tail domain-containing protein n=1 Tax=M... [more]
UPI001F2679FD5.020e-930.04FG-GAP-like repeat-containing protein n=2 Tax=Flav... [more]
A0A562C7Q6_9GAMM7.190e-930.61VCBS repeat protein n=1 Tax=Luteimonas sp. J16 Tax... [more]
A0A813D458_POLGL2.300e-828.97Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A0L0DIU0_THETB3.290e-831.50Beta_helix domain-containing protein n=2 Tax=Theca... [more]
UPI001C561DB43.420e-831.72FG-GAP-like repeat-containing protein n=1 Tax=Proc... [more]
A0A259TWV2_9BACT5.110e-831.18FlgD_ig domain-containing protein n=1 Tax=Rubricoc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13517VCBScoord: 71..133
e-value: 2.0E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR45460FAMILY NOT NAMEDcoord: 10..184
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 14..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig92487contigP-canaliculata_contig92487:132..830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig92487.23235.1mRNA_P-canaliculata_contig92487.23235.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig92487 132..830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig92487.23235.1 ID=prot_P-canaliculata_contig92487.23235.1|Name=mRNA_P-canaliculata_contig92487.23235.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=233bp
FAPPVVISSALQGQPFAVDADGDGDLDVLQEEAFPPTTRVWLIENSGIGN
QFPRRIVVDLAQGLRRAVPIDVDSDGLPDLVTQDDTIAGPGVRLNLGGGN
FGPPARLSTSFPTDFIVTDVVDFNADGRVDLLVRSSGSSGSLRWVEKLGP
LDFAPSRVLADGFLSPRLDDLDGDGLLDVIAGNSYRLQTSPGILGSFERI
APGLPAPRPDGLADFDGDGDLDAWVSVLGPAVY
back to top